BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0556000 Os07g0556000|AK121938
(320 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G03270.1 | chr4:1432375-1433691 REVERSE LENGTH=303 119 2e-27
AT1G70210.1 | chr1:26440015-26441980 FORWARD LENGTH=340 96 3e-20
AT3G50070.1 | chr3:18565322-18566669 REVERSE LENGTH=362 90 2e-18
AT5G65420.3 | chr5:26141592-26143750 REVERSE LENGTH=319 89 4e-18
AT4G37630.1 | chr4:17679497-17680788 FORWARD LENGTH=324 84 9e-17
AT5G10440.1 | chr5:3280611-3282342 REVERSE LENGTH=299 84 1e-16
AT5G67260.1 | chr5:26836313-26837665 FORWARD LENGTH=368 82 5e-16
AT2G22490.2 | chr2:9554157-9555873 REVERSE LENGTH=363 80 2e-15
AT4G34160.1 | chr4:16357903-16359304 FORWARD LENGTH=377 68 5e-12
AT1G77390.1 | chr1:29081904-29084137 REVERSE LENGTH=443 54 1e-07
AT5G02110.1 | chr5:417087-418553 FORWARD LENGTH=342 48 6e-06
>AT4G03270.1 | chr4:1432375-1433691 REVERSE LENGTH=303
Length = 302
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%)
Query: 64 SKVRYDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAA 123
S +Y + D P + YLA+NY+DR+LS + + PW +L+++SC++L+AKM R
Sbjct: 64 SITQYSRKFD-DPSLTYLAVNYLDRFLSSEDMP-QSKPWILKLISLSCVSLSAKM-RKPD 120
Query: 124 ISAADIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALL 183
+S +D+ EF FD I+RME ++L AL+WR RSVTP +FL FF+S + P LL
Sbjct: 121 MSVSDLPVEGEF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLL 179
Query: 184 D-AIKARAVDLLLRVQPEVKMAEFSPSVXXXXXXXXXXXXXXXXXXXXFEAGVAACPFVN 242
++K++ DL +Q ++ EF PSV F + C +VN
Sbjct: 180 KHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYVN 239
Query: 243 SEKLRECGE-VMAAACGVGPSWAAAATSAETPVTVLG 278
++L EC + + VG + S ET V VL
Sbjct: 240 KDELMECYKAIQERDIIVGENEG----STETAVNVLD 272
>AT1G70210.1 | chr1:26440015-26441980 FORWARD LENGTH=340
Length = 339
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 5/138 (3%)
Query: 73 DVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ-R 131
+ P AYLA+NY+DR+L R+L E + W +LLA++CL+LAAKM+ S D Q
Sbjct: 97 NFQPLTAYLAVNYMDRFLYARRLP-ETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVA 155
Query: 132 GEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAV 191
G +++F+ I+RME +VL+ L+WR RSVTP F+ FF P L + A
Sbjct: 156 GVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS---GTFLGFFISHAT 212
Query: 192 DLLLRVQPEVKMAEFSPS 209
+++L E E+ PS
Sbjct: 213 EIILSNIKEASFLEYWPS 230
>AT3G50070.1 | chr3:18565322-18566669 REVERSE LENGTH=362
Length = 361
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 5/176 (2%)
Query: 79 AYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMF 137
A LA+NY DR+++ R+ ++ PW +L A++CL+LAAK++ D Q E ++F
Sbjct: 107 ALLAVNYFDRFITSRKFQTDK-PWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVF 165
Query: 138 DEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRV 197
+ IQRME +VL+ L+WR VTP++F + + H +R LLL +
Sbjct: 166 EAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQL---EFLSRCESLLLSI 222
Query: 198 QPEVKMAEFSPSVXXXXXXXXXXXXXXXXXXXXFEAGVAACPFVNSEKLRECGEVM 253
P+ + FSPSV +++ + V+SEK+ +C E++
Sbjct: 223 IPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELV 278
>AT5G65420.3 | chr5:26141592-26143750 REVERSE LENGTH=319
Length = 318
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 84/144 (58%), Gaps = 13/144 (9%)
Query: 73 DVH---PRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADI 129
+VH P LA+NY+DR+LS L + W +LLA++CL+LAAK++ D+
Sbjct: 100 EVHQFGPLCFCLAMNYLDRFLSVHDLPSGKG-WILQLLAVACLSLAAKIEETEVPMLIDL 158
Query: 130 QRGE-EFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFL---SACFPQPRHPALLDA 185
Q G+ +F+F+ +QRME +VLN L+WR R++TP +++ +FL S C +P + +
Sbjct: 159 QVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLI--- 215
Query: 186 IKARAVDLLLRVQPEVKMAEFSPS 209
+R++ ++ + EF PS
Sbjct: 216 --SRSLQVIASTTKGIDFLEFRPS 237
>AT4G37630.1 | chr4:17679497-17680788 FORWARD LENGTH=324
Length = 323
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 77 RVAYLALNYVDRYLSKRQLACERN-PWAPRLLAISCLTLAAKMQRAAAISAADIQRGEEF 135
+ AY+A++Y D +L KR + +++ WA RLL+++CL+LAAKM+ + + +F
Sbjct: 91 QTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDF 150
Query: 136 MFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLL 195
+F I++ E ++L+ L+W+ +TP + +FL A Q H D + R+ D LL
Sbjct: 151 VFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFL-AKISQDNHSVSKDLVLLRSSDSLL 209
Query: 196 RVQPEVKMAEF 206
+ E+ E+
Sbjct: 210 ALTKEISFTEY 220
>AT5G10440.1 | chr5:3280611-3282342 REVERSE LENGTH=299
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 40/206 (19%)
Query: 26 FTSPADEPIASLLDAEGHHSPSVXXXXXXXXXXXXGFISKVRYDGELDVHPRVAYL---- 81
F ++E + +++ E HSP ++ ++R +G+LD + R+ L
Sbjct: 31 FPLESEEIVREMIEKERQHSPR------------DDYLKRLR-NGDLDFNVRIQALGWIW 77
Query: 82 ---------------ALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISA 126
A+NY+DR+LS L + W +LLA++CL+LAAK++
Sbjct: 78 KACEELQFGPLCICLAMNYLDRFLSVHDLPSGK-AWTVQLLAVACLSLAAKIEETNVPEL 136
Query: 127 ADIQRGE-EFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSAC--FPQPRHPALL 183
+Q G F+F+ +QRME +VLN L WR R+VTP +++ +FLS + Q H L+
Sbjct: 137 MQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLV 196
Query: 184 DAIKARAVDLLLRVQPEVKMAEFSPS 209
R++ ++ + EF S
Sbjct: 197 ----TRSLQVIASTTKGIDFLEFRAS 218
>AT5G67260.1 | chr5:26836313-26837665 FORWARD LENGTH=368
Length = 367
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 31 DEPIASLLDAEGHHSPSVXXXXXXXXXXXXGFISKVRYDGELDVHPRV----------AY 80
D+ I SL+ E +P GF+ R + LD RV A
Sbjct: 66 DDEILSLISKENETNPCFGEQILD------GFLVSCRKEA-LDWVLRVKSHYGFTSLTAI 118
Query: 81 LALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMFDE 139
LA+NY DR+++ +L ++ PW +L+A++ L+LAAK++ D+Q E ++F+
Sbjct: 119 LAVNYFDRFMTSIKLQTDK-PWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEA 177
Query: 140 AKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRVQP 199
IQRME ++L+ L+WR VTP++F + F H L K LL+ V
Sbjct: 178 KTIQRMELLILSTLQWRMHPVTPISFFDHIIRR-FGSKWHQQLDFCRKCER--LLISVIA 234
Query: 200 EVKMAEFSPSVXXXXXXXXXXXXXXXXXXXXFEAGVAACPFVNSEKLRECGEVM 253
+ + + PSV +++ + VN EK+ EC E++
Sbjct: 235 DTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYELL 288
>AT2G22490.2 | chr2:9554157-9555873 REVERSE LENGTH=363
Length = 362
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 81 LALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMFDE 139
L++NY+DR+L+ +L +++ WA +LLA+SCL+LA+KM+ D+Q + +F+F+
Sbjct: 120 LSMNYLDRFLTSYELPKDKD-WAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEA 178
Query: 140 AKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIKARAVDLLLRVQP 199
I+RME +V+ L WR +++TP +F+ +F+ H + + + R+ +L
Sbjct: 179 KTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI---SGHVS--ENLIYRSSRFILNTTK 233
Query: 200 EVKMAEFSPS 209
++ +F PS
Sbjct: 234 AIEFLDFRPS 243
>AT4G34160.1 | chr4:16357903-16359304 FORWARD LENGTH=377
Length = 376
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 79 AYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMF 137
A LA+ Y+D+++ L ++ PW +L++++CL+LAAK++ D Q E +++F
Sbjct: 108 AVLAITYLDKFICSYSLQRDK-PWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVF 166
Query: 138 DEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSAC-FPQPRHPALLDAIKARAVDLLLR 196
+ IQRME ++L+ LEW+ +TP++F+ + H L+ + LLL
Sbjct: 167 EAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLN----KCHRLLLS 222
Query: 197 VQPEVKMAEFSPSVXXXXXXXXXXXXXXXXXXXXFEAGVAACPFVNSEKLRECGEVM 253
V + + + PSV ++ + + EK++ C +++
Sbjct: 223 VISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLI 279
>AT1G77390.1 | chr1:29081904-29084137 REVERSE LENGTH=443
Length = 442
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 71 ELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQ 130
E + P YLA+NYVDRYL+ + N +LL ++C+ +AAK + D
Sbjct: 225 EYRLSPETLYLAVNYVDRYLTGNAI----NKQNLQLLGVTCMMIAAKYEEVCVPQVEDFC 280
Query: 131 RGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALL 183
+ + ++ ME VLN L++ + T FL FL A + P+LL
Sbjct: 281 YITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGRKEVPSLL 333
>AT5G02110.1 | chr5:417087-418553 FORWARD LENGTH=342
Length = 341
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 70 GELDVHPRVAYLALNYVDRYLSKRQLAC--ERNPWAPRLLAISCLTLAAKMQRAAA-ISA 126
L++ + A N DR++ + C E W L+A++ L++A+K +
Sbjct: 90 SRLNLSYETVFSAANCFDRFV---YMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLE 146
Query: 127 ADIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAI 186
G MF + +ME ++L ALEWR +VT F +S H I
Sbjct: 147 ELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDH-----MI 201
Query: 187 KARAVDLLLRVQPEVKMAEFSPSV 210
R + LL V ++KM ++ PSV
Sbjct: 202 MNRITNHLLDVICDLKMLQYPPSV 225
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,332,870
Number of extensions: 162646
Number of successful extensions: 329
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 325
Number of HSP's successfully gapped: 11
Length of query: 320
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 221
Effective length of database: 8,392,385
Effective search space: 1854717085
Effective search space used: 1854717085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)