BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0548800 Os07g0548800|AK120534
(202 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61667.1 | chr1:22767674-22768269 FORWARD LENGTH=157 154 3e-38
AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162 148 2e-36
AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170 102 1e-22
AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272 101 3e-22
AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196 98 2e-21
AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176 96 9e-21
AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182 70 1e-12
AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180 69 1e-12
AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150 56 1e-08
AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171 55 3e-08
AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171 54 5e-08
AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171 53 9e-08
AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167 53 1e-07
AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168 52 2e-07
AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155 52 2e-07
>AT1G61667.1 | chr1:22767674-22768269 FORWARD LENGTH=157
Length = 156
Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 91/119 (76%), Gaps = 2/119 (1%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
+I LL GLPGGL P VESYSLD+ G LE +L PC+A++++ +FD V++ NL
Sbjct: 21 SIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENR--VYFDRVIKANL 78
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDCKP 162
S+G L G+EGL+QEELF+WLPVKGI V DP SG++LFDIG AHK++SRSLFE+PP C P
Sbjct: 79 SYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPPVCYP 137
>AT5G54530.1 | chr5:22152781-22154201 FORWARD LENGTH=162
Length = 161
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 93/119 (78%), Gaps = 3/119 (2%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
T+H++LR+ GLP GLLP+ V+SY L +G LE L+APCYAK++ F+ VVRGNL
Sbjct: 28 TVHDVLRSEGLPAGLLPQEVDSYILHN-DGRLEVFLAAPCYAKFETN--VHFEAVVRGNL 84
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDCKP 162
S+G+L GVEGLSQ+ELF+WL VK IVV +P SGVI+FDIG A K+LS SLFE+PP CKP
Sbjct: 85 SYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCKP 143
>AT3G07470.1 | chr3:2387291-2388343 REVERSE LENGTH=170
Length = 169
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Query: 43 DTIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGN 102
+TI+E+L +GLP G+ P+GV ++ D G L+ C AKY+ +D + G
Sbjct: 29 ETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETE--IHYDANITGT 86
Query: 103 LSFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDCKP 162
+ + + G+S +ELF+W PVKGI V P SG+I FD+G K+ S SLFE P DC P
Sbjct: 87 IGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVP 146
>AT3G07460.2 | chr3:2384544-2385617 REVERSE LENGTH=272
Length = 271
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%), Gaps = 2/118 (1%)
Query: 43 DTIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGN 102
++I E+L +GLP GL P+GV+ ++++ G L+ C AKY+ +D +V G
Sbjct: 28 ESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKYETE--LHYDEIVSGT 85
Query: 103 LSFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
+ + +R + G+S +ELF+WL VKGI V P SG+I FD+G K+ S SLFE P DC
Sbjct: 86 IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDC 143
>AT5G16380.1 | chr5:5359730-5360613 REVERSE LENGTH=196
Length = 195
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
+ ++ LR LP G++P+GV ++S+D G L PC AK+++ FD + G L
Sbjct: 30 SFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPVPCDAKFENQ--FHFDYNISGVL 87
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
S G + + G++Q+ELF+W VKGI V SG+I FD+G A K+LS SLFE P DC
Sbjct: 88 SDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFESPRDC 144
>AT1G55265.1 | chr1:20617326-20617853 FORWARD LENGTH=176
Length = 175
Score = 96.3 bits (238), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 3/118 (2%)
Query: 43 DTIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGN 102
D IH+LL +G P GLLP V+SY++ + +G L + CY K+ D L F+ + G
Sbjct: 52 DDIHDLLPRYGFPKGLLPNNVKSYTISD-DGDFTVDLISSCYVKFSD-QLVFYGKNIAGK 109
Query: 103 LSFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
LS+G+++ V G+ +E F+WLP+ + +DP S ++F +G+ K L S+FE P C
Sbjct: 110 LSYGSVKDVRGIQAKEAFLWLPITAM-ESDPSSATVVFSVGFVSKTLPASMFENVPSC 166
>AT5G19860.1 | chr5:6714533-6715837 REVERSE LENGTH=182
Length = 181
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
T++ELL +GLP GLLP V ++L + +G L C ++D L +D + G +
Sbjct: 35 TVYELLPKYGLPSGLLPDTVTDFTLSD-DGRFVVHLPNSCEIEFDY--LVHYDKTISGRI 91
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
+G++ ++G+ ++ F+WL V I V P S I F +G+ +K+L F+ C
Sbjct: 92 GYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSC 148
>AT2G03350.1 | chr2:1019733-1021071 REVERSE LENGTH=180
Length = 179
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
++ +LL+ + LP GL P+ + Y DE L S+PC + DG + T V+G L
Sbjct: 58 SLPDLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGIL 117
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
G L GVEG+ + ++ VW+ V I V S + F G R S+ +++ P D
Sbjct: 118 LRGKLMGVEGM-KTKVLVWVKVTTISVESSKSDKLWFTAGVKKSR-SKDVYDTPHDA 172
>AT1G02813.1 | chr1:620773-621222 FORWARD LENGTH=150
Length = 149
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
+++++L + LP G+LP GV Y L+ G+ + R + C D + + V+ G +
Sbjct: 24 SVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNTTCQFSIDSYKVK-YKPVISGII 82
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
+ G + + G+S + LF W+ + V+ G V F +G A + S F + P C
Sbjct: 83 TRGRVIRLIGVSVKVLFFWINISE--VSRDGDDVEFF-VGAASEEFSSKYFVDSPKC 136
>AT5G37070.1 | chr5:14651091-14652147 FORWARD LENGTH=171
Length = 170
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 47 ELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNLSFG 106
ELL+ GLP G+ P+ +Y +E G L + C Y D + F T V G L G
Sbjct: 56 ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKG 115
Query: 107 ALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFE 155
L VEG+ + ++ +W+ V I S + F G R SR +E
Sbjct: 116 KLAEVEGM-KTKVMIWVKVTCI---SADSSKVYFTAGIKKSR-SRDAYE 159
>AT3G08890.1 | chr3:2706701-2707775 FORWARD LENGTH=171
Length = 170
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 47 ELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNLSFG 106
ELL+ GLP G+ PR +Y +E L + + C Y D + F T V G L G
Sbjct: 56 ELLKEFGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKG 115
Query: 107 ALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFE 155
L VEG+ + ++ +W+ V I S + F G R SR +E
Sbjct: 116 KLADVEGM-KTKVMIWVKVTSI---SADSSKVHFTAGMKKSR-SRDAYE 159
>AT5G01610.1 | chr5:231075-231994 FORWARD LENGTH=171
Length = 170
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 47 ELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNLSFG 106
ELL+ + LP G+ P +Y DE L + + C Y D + F T V G+L G
Sbjct: 56 ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115
Query: 107 ALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFE 155
L VEG+ + ++ +W+ V I + + F G R SR +E
Sbjct: 116 KLTDVEGI-KTKVMIWVKVTSI---STDASKVYFTAGMKKSR-SRDAYE 159
>AT1G02816.1 | chr1:621637-622137 FORWARD LENGTH=167
Length = 166
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
T + LL+++ P G+LP+GV SY LD++ G A + C + + + G +
Sbjct: 31 TAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYI 90
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
S + + G+ + LF+WL IV + F +G F E P C
Sbjct: 91 SENKITKLTGVKVKVLFLWL---NIVEVIRNGDELEFSVGITSANFEIDEFYESPQC 144
>AT4G02370.1 | chr4:1042458-1042961 FORWARD LENGTH=168
Length = 167
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
T + LL+++ P G+LP+GV +Y LD G A + C + + + G +
Sbjct: 31 TAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYFNDSCSFNLVGSYQLNYKSTISGYI 90
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVVADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
S L+ + G+ + LF+WL IV + F +G + F E P C
Sbjct: 91 SENKLKKLTGVKVKVLFLWL---NIVEVIRNGDEMEFSVGITSANFAIQEFLESPQC 144
>AT4G02360.1 | chr4:1041179-1041643 FORWARD LENGTH=155
Length = 154
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 44 TIHELLRTHGLPGGLLPRGVESYSLDEANGLLEARLSAPCYAKYDDGDLAFFDTVVRGNL 103
T ++ ++ + LP G+LP+GV Y L+ G + + C L + + + G +
Sbjct: 28 TAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQLK-YKSTISGVI 86
Query: 104 SFGALRGVEGLSQEELFVWLPVKGIVV--ADPGSGVILFDIGYAHKRLSRSLFEEPPDC 160
S G ++ ++G+S + LF W+ + + + AD + F +G A + FEE P C
Sbjct: 87 SPGHVKNLKGVSVKVLFFWVNIAEVSLDGAD-----LDFSVGIASASFPAANFEESPQC 140
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,492,317
Number of extensions: 131588
Number of successful extensions: 226
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 213
Number of HSP's successfully gapped: 15
Length of query: 202
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 108
Effective length of database: 8,529,465
Effective search space: 921182220
Effective search space used: 921182220
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 109 (46.6 bits)