BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0527900 Os07g0527900|Os07g0527900
(380 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10955.1 | chr4:6713778-6715372 REVERSE LENGTH=351 149 2e-36
AT2G05260.1 | chr2:1918730-1919893 FORWARD LENGTH=359 144 9e-35
AT5G24220.1 | chr5:8225861-8227551 FORWARD LENGTH=377 139 2e-33
AT5G24180.1 | chr5:8195600-8197119 FORWARD LENGTH=376 137 9e-33
AT5G24230.1 | chr5:8229182-8230841 FORWARD LENGTH=370 125 3e-29
AT5G24210.1 | chr5:8217877-8219466 FORWARD LENGTH=351 108 5e-24
AT5G24200.1 | chr5:8203348-8205626 FORWARD LENGTH=345 100 1e-21
AT5G50890.1 | chr5:20702684-20704235 FORWARD LENGTH=409 94 1e-19
AT5G24190.1 | chr5:8199757-8200773 FORWARD LENGTH=246 80 2e-15
>AT4G10955.1 | chr4:6713778-6715372 REVERSE LENGTH=351
Length = 350
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 180/406 (44%), Gaps = 89/406 (21%)
Query: 1 MASSSDVDLADSGPVHMMAKNDCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDRS-- 58
M S D D + +GP+H+ + IDW E HR VA LV+G+ V +DR
Sbjct: 2 MISERD-DFSLTGPLHLTS-----------IDWANEHHRRSVAGSLVQGIYVAERDRQLQ 49
Query: 59 --NP---LAPAWWKSFGFRCRNVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPP 113
P L+P W + F FR DD+ IFG YEY+ P
Sbjct: 50 REGPELALSPIWSEFFHFRLIRKFVDDA------------------DNSIFGGIYEYKLP 91
Query: 114 ARLPRHPSA----PSYVVAFRGTIP---TNLGDLIHDIKIVYNTFSNSNRCDITHDEVEG 166
+L + + P +V+AFRGT+ + D+ HDI ++ N + R +I V
Sbjct: 92 QQLSQTVKSMEFSPRFVIAFRGTVTKVDSISRDIEHDIHVIRNGLHTTTRFEIAIQAVRN 151
Query: 167 LLQGGANSCTMWLAGHSLGASQALDVGRSMAEKGFNLPTFLFNPPQVSPAPAIYLLRPNE 226
++ ++WLAGHSLGAS AL G+++A GF F FNPP +S AP + ++
Sbjct: 152 IV-ASVGGSSVWLAGHSLGASMALLTGKTIARTGFFPECFAFNPPFLS-APIEKI--KDK 207
Query: 227 KAKMHLYATSSLLKVGLSKIVKSHE----------------EHMEDLFKQLYVHDSDPIC 270
+ K + S++ GL+ K+ + E + D F +LYV+ D +C
Sbjct: 208 RIKHGIRIAGSVITAGLALAKKATQHYSQNDRALPAPPDPFEALSDWFPRLYVNPGDHLC 267
Query: 271 QGYVDYFEQRQLVQERFPSIGMSAM-KLSYRDMFFSALNKDKERSHLLPSALLWENSRMD 329
YV YFE R ++E IG+ + +++ + L +E HL+PS++L N
Sbjct: 268 SEYVGYFEHRNKMEE----IGIGFVERVATQHSLGGMLLGGQEPVHLIPSSVLTVNLSSS 323
Query: 330 NDVENHPSKCTLLRKANRLKKRVLKAHSLEQWWKPDNELSLTKTQY 375
D + +AH + QWW+ DN+ QY
Sbjct: 324 RDFK--------------------QAHGIHQWWREDNKFETKVYQY 349
>AT2G05260.1 | chr2:1918730-1919893 FORWARD LENGTH=359
Length = 358
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 172/384 (44%), Gaps = 78/384 (20%)
Query: 21 NDCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDR------SNPLAPAWWKSFGFRCR 74
N C + +DW E+H+ CVAACLV+G+ ++ +DR + LA WW+SF F+
Sbjct: 9 NLCGPTHLTTVDWGNEDHQRCVAACLVQGIYIVEQDRQLKREGTEALASPWWESFNFKLI 68
Query: 75 NVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPPARLPRHPSAPSYVVAFRGTIP 134
+KDD+ SI FG +EY+ P YV+AFRGT+
Sbjct: 69 RHLKDDADFSI------------------FGGIFEYKSLQPDVVDSGVPRYVIAFRGTLT 110
Query: 135 ---TNLGDLIHDIKIVYNTFSNSNRCDITHDEVEGLLQGGANSCTMWLAGHSLGASQALD 191
+ D+ DI I+ N ++R +I V + + + WL GHSLGA+ AL
Sbjct: 111 KADSITRDIELDIHIIRNGLHRTSRFEIAMQAVRSMADS-VGASSFWLTGHSLGAAMALL 169
Query: 192 VGRSMAEKGFNLPTFLFNPPQVSPAPAIYLLRPNEKAKMHLYATSSLLKVGLS------- 244
G++M + G + + LFNPP VSP P + NE+ + + SL+ GL+
Sbjct: 170 AGKTMGKSGVYIKSLLFNPPYVSP-PIERI--ANERVRHGIRFAGSLITAGLALSRTLKQ 226
Query: 245 ---------KIVKSHEEHMEDL---FKQLYVHDSDPICQGYVDYFEQRQLVQERFPSIGM 292
++ E+ +E L ++V+ D +C Y+ +FE R +++ G+
Sbjct: 227 TQQPQQQQLQLQNLTEDPLEALSSWLPNIHVNPGDHLCSEYIGFFEHRGNMEQIGYGAGI 286
Query: 293 S---AMKLSYRDMFFSALN-----KDKERSHLLPSALLWENSRMDNDVENHPSKCTLLRK 344
AM+ S + A+ + +E H++PSA L N + D ++
Sbjct: 287 VERMAMQHSLGGLLMDAMGVSNAVEVEEPVHVIPSANLIVNKTISEDYKD---------- 336
Query: 345 ANRLKKRVLKAHSLEQWWKPDNEL 368
AH + QWW+ D +L
Sbjct: 337 ----------AHGIHQWWRDDQDL 350
>AT5G24220.1 | chr5:8225861-8227551 FORWARD LENGTH=377
Length = 376
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 177/394 (44%), Gaps = 82/394 (20%)
Query: 1 MASSSDVDL-ADSGPVHMMAKNDCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDR-- 57
MAS SD D+ + GP H+ + IDW HR VA+ LV GV M +D+
Sbjct: 16 MASDSDRDVFSIFGPFHLTS-----------IDWTNSYHRTSVASSLVNGVYTMERDKQE 64
Query: 58 ----SNPLAPAWWKSFGFRCRNVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPP 113
S A WW F F + DD I+GA +EY+
Sbjct: 65 KRVGSESRAMPWWDFFNFSLVETLIDD------------------YDSSIYGAVFEYKLS 106
Query: 114 --ARLPRHPSAP-SYVVAFRGTI---PTNLGDLIHDIKIVYNTFSNSNRCDITHDEVEGL 167
+ H AP YV+AFRGTI T + D+ H++K +NT R + +
Sbjct: 107 NLCQNTSHAKAPPRYVIAFRGTILESDTWMTDVKHNLKFSFNTLHEGGRSLQAIRAIRSM 166
Query: 168 LQGGANSCTMWLAGHSLGASQALDVGRSMAEKGFNLPTFLFNPPQVSPAPAIYLLRPNEK 227
+ + + +WLAGHSLGA+ L G++M GF L +++FNPP +S P + L +K
Sbjct: 167 VDKHSEAA-IWLAGHSLGAALVLLAGKTMTSFGFLLESYIFNPP-ISCIP-LEQLPGGKK 223
Query: 228 AKMHLYATSSLLKVGLSKIVKSHEEHMED-----LFKQLYVHDSDPICQGYVDYFEQRQL 282
K T +++K ++ ++ + +D LYV+ +DPIC GY+DYF +
Sbjct: 224 IKGVFQFTKTVVKATVAMVLTDLQVQEDDPKTASWIPYLYVNPADPICAGYIDYFRHKTF 283
Query: 283 VQERFPSIGMSAMKL-----SYRDMFF---SALNKDKERSHLLPSALLWENSRMDNDVEN 334
+ E IG S ++ S R + S+ + E HLLPSA + N +N
Sbjct: 284 MSE----IGASHIERIGAGKSVRSLLMGKSSSSDLSTEPLHLLPSADMIVN-------KN 332
Query: 335 HPSKCTLLRKANRLKKRVLKAHSLEQWWKPDNEL 368
P+K V+ AH L QWW+ D+ +
Sbjct: 333 KPTK-------------VMTAHGLHQWWERDSAM 353
>AT5G24180.1 | chr5:8195600-8197119 FORWARD LENGTH=376
Length = 375
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 167/390 (42%), Gaps = 77/390 (19%)
Query: 3 SSSDVDLADS-GPVHMMAKNDCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDR---- 57
+S D D + GP H+ + IDW+ + HR VA+ LV GV + DR
Sbjct: 16 ASKDTDTFNIFGPFHLTS-----------IDWNNQYHRTSVASSLVNGVYTLEGDRLEER 64
Query: 58 --SNPLAPAWWKSFGFRCRNVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPPAR 115
S LA WW+ F F + DD I+GA +EYE
Sbjct: 65 EGSEALAKPWWEFFHFTLLETLIDDD-------------------SSIYGAIFEYELYHL 105
Query: 116 LPRHP--SAPSYVVAFRGTI---PTNLGDLIHDIKIVYNTFSNSNRCDITHDEVEGLLQG 170
P P YV+AFRGT+ T DL D+K ++NT R + + ++
Sbjct: 106 YQNTPHVKVPRYVIAFRGTVLKGKTWKFDLKLDLKCIFNTLHQGGRSMYAINVIRRMVDK 165
Query: 171 GANSCTMWLAGHSLGASQALDVGRSMAEKGFNLPTFLFNPPQVSPAPAIYLLRPNEKAKM 230
N +WLAGHSLGA+ L G++M GF L +++FNPP +S P + L + K
Sbjct: 166 -HNHSAIWLAGHSLGAALVLLAGKTMKISGFLLESYIFNPP-ISSIP-LEQLPGGDIIKG 222
Query: 231 HLYATSSLLKVGLSKIVKSHEEHMED-----LFKQLYVHDSDPICQGYVDYFEQRQLVQE 285
T S++K ++ + + +D LYV+ +DPIC GY+DYF + + E
Sbjct: 223 LFQITKSVVKATVAMALTDLQVPKDDPKTASWIPYLYVNPADPICAGYIDYFRHKTFMSE 282
Query: 286 RFPS-IGMSAMKLSYRDMFFSALNK------DKERSHLLPSALLWENSRMDNDVENHPSK 338
S I + S R + K E HLLPSA + N +N P+K
Sbjct: 283 IGASHIERIGARKSVRSLLVGRRGKLSPSDLSSEPLHLLPSADMTVN-------KNKPTK 335
Query: 339 CTLLRKANRLKKRVLKAHSLEQWWKPDNEL 368
T AH L QWW+ D+ L
Sbjct: 336 ST-------------TAHGLHQWWERDSTL 352
>AT5G24230.1 | chr5:8229182-8230841 FORWARD LENGTH=370
Length = 369
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 171/402 (42%), Gaps = 74/402 (18%)
Query: 1 MASSSDVDLADSGPVHMMAKNDCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDRSN- 59
MAS ++ + SGP+H+ + IDW+ HR VA+CLV+ V + +DR
Sbjct: 15 MASQREI-FSISGPIHLTS-----------IDWNNSYHRTSVASCLVQAVYTLERDRQQN 62
Query: 60 -----PLAPAWWKSFGFRCRNVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPPA 114
A WW+ F F + DDS SI F Y + P +
Sbjct: 63 RIGLKSQANHWWEFFNFTLAETLIDDSDGSIYGAVFEYK--------HFFSYNYHHTPHS 114
Query: 115 RLPRHPSAPSYVVAFRGTI---PTNLGDLIHDIKIVYNTFSNSNRCDITHDEVEGLLQGG 171
+ P P +V+AFRGTI + DL D++ + ++ +S R ++ +
Sbjct: 115 KPP-----PRHVIAFRGTILKPHSRSRDLKLDLRCIRDSLHDSTRFVHAIQVIQSAVAKT 169
Query: 172 ANSCTMWLAGHSLGASQALDVGRSMAEKGFNLPTFLFNPPQVSPAPAIYLLRPNEKAKMH 231
N+ +WLAGHSLGA+ AL G+ M GF L ++LFNPP S P L++ +EK K
Sbjct: 170 GNAA-VWLAGHSLGAAVALLAGKIMTRSGFPLESYLFNPP-FSSIPIEKLVK-SEKLKHG 226
Query: 232 LYATSSLLKVGLSKIVKS--HEEHMED--------LFKQLYVHDSDPICQGYVDYFEQRQ 281
+ SL+K G++ VK H + ED LY++ D IC Y+ YF+ R
Sbjct: 227 VRFAGSLVKAGVAIAVKGRHHNKGQEDDSFMKLASWIPYLYLNPLDTICSEYIGYFKHRN 286
Query: 282 LV-------QERFPSIGMSAMKLSYRDMFFSALNKDKERSHLLPSALLWENSRMDNDVEN 334
+ ER + LS S+ + E HLLPSA + N+ + +
Sbjct: 287 KMFEIGAGKIERIATRNSLRSLLSGGGGGGSSSDSSSEPLHLLPSAYMTINASKSPNFK- 345
Query: 335 HPSKCTLLRKANRLKKRVLKAHSLEQWWKPDNELSLTKTQYN 376
+AH + QWW P Q+N
Sbjct: 346 -------------------RAHGIHQWWDPMFNGEYVLHQFN 368
>AT5G24210.1 | chr5:8217877-8219466 FORWARD LENGTH=351
Length = 350
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 150/362 (41%), Gaps = 54/362 (14%)
Query: 32 DWDKEEHRHCVAACLVKGVMVMMKDRSN------PLAPAWWKSFGFRCRNVIKDDSWVSI 85
DW+ HR VA+CLV+GV +DR N LA WWKSF F D+S +
Sbjct: 25 DWNNLYHRTTVASCLVQGVYAKERDRENNRNGSESLATPWWKSFNFTL-----DESEI-- 77
Query: 86 XXXXXXXXXXXXXXXXEIFGATYE----YEPPARLPRHPSAPSYVVAFRGTIPTNLGDLI 141
I+GA ++ YE P P YV+A RGT+P+++ D I
Sbjct: 78 ---------LYDAFDGSIYGAVFQNMINYENTPNSIVVP--PRYVIALRGTVPSDVSDWI 126
Query: 142 HDIKIVYNTFSNSNRCDITHDEVEGLLQGGANSCTMWLAGHSLGASQALDVGRSMAEKGF 201
H+ +IV + ++ L+ N+ +W+AGHSLGA AL G+ MA G
Sbjct: 127 HNSRIVLEKLHGGGKHMHVIRKIYSLVAKHGNTA-VWIAGHSLGAGLALLAGKDMAMSGL 185
Query: 202 NLPTFLFNPPQVSPAPAIYLLRPNEKAKMHLYATSSLLKVGLSKIVKSHEEHMEDLFK-- 259
+ ++FNPP +S P + N + T L K G++K+V E +K
Sbjct: 186 PVEAYIFNPP-ISLIP-LEQCGYNHELNFVYRLTRDLFKAGIAKVVDLDEGQEGPRYKNL 243
Query: 260 -----QLYVHDSDPICQGYVDYFEQ-RQLVQERFPSIGMSAMKLSYRDMFFSALNKDKER 313
L+V+ SD IC Y+ YF + + I A S R M F D E
Sbjct: 244 ASWRPHLFVNQSDVICSEYIGYFNHVVTMTEAGLGEISRLASGYSVRRMLFG----DGEN 299
Query: 314 SHLLPSALLWENSRMDNDVENHPSKCTLLRKANRLKKRVLKAHSLEQWWKPDNELSLTKT 373
W +S + + PS ++ K H + QWW + S T +
Sbjct: 300 ---------WSSSSTPDHLHFLPSAFMIVNKTE--ASEFYNKHGIHQWWNHMLKQSTTFS 348
Query: 374 QY 375
Y
Sbjct: 349 SY 350
>AT5G24200.1 | chr5:8203348-8205626 FORWARD LENGTH=345
Length = 344
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 63/356 (17%)
Query: 31 IDWDKEEHRHCVAACLVKGVMVMMKDR------SNPLAPAWWKSFGFRCRNVIKDDSWVS 84
DW+ HR + +CLV+GV M +DR S+ A WW + F ++D
Sbjct: 19 FDWNNLYHRASLVSCLVQGVYTMERDRQQNRCGSDSKARPWWAFYRFTLYQQLRD----- 73
Query: 85 IXXXXXXXXXXXXXXXXEIFGATYEYEPPAR-LPRHPSAPSYVVAFRGTI--PTNLG-DL 140
I+GA ++ + + P P Y++A RGTI P + D+
Sbjct: 74 -------------ALDGSIYGAVFQNDINYQNTPNSIVPPRYIIALRGTILSPQTMACDV 120
Query: 141 IHDIKIVYNTFSNSNRCDITHDEVEGLLQGGANSCTMWLAGHSLGASQALDVGRSMAEKG 200
+I+I + R ++ + N+ +W+AGHSLGA AL G+ MA G
Sbjct: 121 QLNIRIAFENLYRGGRFVQAIQAMQYFVATYGNT-AIWIAGHSLGAGLALLAGKIMAMYG 179
Query: 201 FNLPTFLFNPPQVSPAPAIYLLRPNEKAKMHLYATSSLLKVGLSKIVKSHEEHMEDLFK- 259
+ ++FNPP +S P L+ +E K + +LK G+++++ +E H LF
Sbjct: 180 CPVEAYIFNPP-ISLIPLEQLVE-SEDLKCAVRLARDILKAGIARVLDLNEGHESHLFMN 237
Query: 260 ------QLYVHDSDPICQGYVDYFEQRQLVQERFPSIGMSAMKLSYRDMFFSALNKDKER 313
L+V+ SDPIC Y+ YF R + E + S R + F
Sbjct: 238 LASWRPHLFVNQSDPICSEYIGYFNHRGDMNELQLGRIERLARYSIRRILFGGGESSSSY 297
Query: 314 S-----HLLPSALLWENSRMDNDVENHPSKCTLLRKANRLKKRVLKAHSLEQWWKP 364
S H LPSA++ N+ + D + H + QWW P
Sbjct: 298 SSEEHLHFLPSAIVMVNTIISPDFQTD--------------------HGIHQWWNP 333
>AT5G50890.1 | chr5:20702684-20704235 FORWARD LENGTH=409
Length = 408
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 162/408 (39%), Gaps = 120/408 (29%)
Query: 12 SGPVHMMAKN--DCTGSSGIVIDWDKEEHRHCVAACLVKGVMVMMKDRS------NPLAP 63
SGP ++ + N D SS W ++ V AC ++ ++ DR N LAP
Sbjct: 49 SGPRNVASPNWRDLINSS-----WKDPNYKRTVMACFIQAAYLLELDRQENRNEQNALAP 103
Query: 64 AWWKSFGFRCRNVIKDDSWVSIXXXXXXXXXXXXXXXXEIFGATYEYEPPARLP-----R 118
WW F ++ + D+ IFGA E++ A + R
Sbjct: 104 KWWIPFKYKLSQTLIDE------------------RDGSIFGAVLEWDRAAAMADLVVIR 145
Query: 119 HPSAPSYVVAFRGTIPTNLG---DLIHDIK-IVYNTFSNSNRCDITHDEVEGLLQ--GGA 172
AP V+A RGTI +L D+ D++ + + + S R ++ + ++ + G +
Sbjct: 146 PSGAPKAVLALRGTILKSLTMRRDIEDDLRFLAWESLKGSVRFNVALEALQSVATRYGSS 205
Query: 173 NSCTMWLAGHSLGASQALDVGRSMAEKGFNLPTFLFNPPQVSPAPAIY------------ 220
N C + GHSLGA AL VG+S+A++G + LFNPP +S A ++
Sbjct: 206 NVCVV---GHSLGAGFALQVGKSLAKEGLFVDAHLFNPPSISVAMSLRNISEKAGVAWKR 262
Query: 221 -----------LLRPNEKAKMHLYATSSLLKVGLSKIVKSHEEHMEDLFK---QLYVHDS 266
L++ + + ++ SS + + S+++ DL K LYV+DS
Sbjct: 263 LMSMLPPKHEPLIQNSNEGQVSPSNVSSGFRNWVPSFYGSNQKPTVDLRKWVPHLYVNDS 322
Query: 267 DPICQGYVDYFEQRQLVQERFPSIGMSAMKLSYRDMFFSALNKDKERSHLLPSALLWENS 326
D IC Y D Q + ++R
Sbjct: 323 DYICCHYTD---QDGVAEKR---------------------------------------- 339
Query: 327 RMDNDVENHPSKCTLLRKANRL------KKRVLKAHSLEQWWKPDNEL 368
M+N N P T + A +L K++ +AH LEQWW + EL
Sbjct: 340 EMNNKENNSPVVNTNFQAAAKLFVMSKGKQKFHEAHGLEQWWSDNLEL 387
>AT5G24190.1 | chr5:8199757-8200773 FORWARD LENGTH=246
Length = 245
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 40/256 (15%)
Query: 139 DLIHDIKIVYNTFSNSNRCDITHDEVEGLLQGGANSCTMWLAGHSLGASQALDVGRSMAE 198
D+ DI+ + + R + ++ + S +WLAGHSLGA+ L G++M
Sbjct: 3 DVKLDIRCILDNLHQGPRTIHAIQAIRAMIDKHSESA-IWLAGHSLGAALVLLAGKTMKI 61
Query: 199 KGFNLPTFLFNPPQVS----PAPAIYLLRPNEKAKMHLY-ATSSLLKVGLSKIVKSHEEH 253
GF L +++FNPP +S P LL+ + L AT++ + + L+ +
Sbjct: 62 SGFLLESYIFNPPIISIPLEQLPGGVLLKGVFRITESLVKATAATVTMALTDQRVQEDSK 121
Query: 254 MEDLFKQLYVHDSDPICQGYVDYFEQRQLVQERFPS-IGMSAMKLSYRDMFFSALNKDK- 311
LYV+ +DPIC GY+DYF+ + + + S I + S+R+ + +
Sbjct: 122 TALWIPYLYVNPADPICAGYIDYFKHKIFMSKIGASHIERIGSRSSFRNPWTRRIGTSSS 181
Query: 312 ----------ERSHLLPSALLWENSRMDNDVENHPSKCTLLRKANRLKKRVLKAHSLEQW 361
E HLLPSA D V + S + + AH L QW
Sbjct: 182 SSSPLSDLSMEPLHLLPSA--------DMTVNKNKSASS------------MAAHGLHQW 221
Query: 362 WKPDNELSLTKTQYNC 377
W+ D+ L K NC
Sbjct: 222 WEQDS--VLRKNWKNC 235
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,596,173
Number of extensions: 358278
Number of successful extensions: 1028
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 989
Number of HSP's successfully gapped: 9
Length of query: 380
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 280
Effective length of database: 8,364,969
Effective search space: 2342191320
Effective search space used: 2342191320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)