BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0525900 Os07g0525900|Os07g0525900
(398 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396 338 2e-93
AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386 241 7e-64
AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393 229 2e-60
AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396 228 5e-60
>AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396
Length = 395
Score = 338 bits (868), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/389 (45%), Positives = 238/389 (61%), Gaps = 12/389 (3%)
Query: 9 TVHEHRRAERADGPATVLAIGTANPANCVTQLDYADFYCRVTNSEHLAGIKDKLDTLCVS 68
++ E R+A+RADGPA +LAIGTANP N V Q +Y D+Y R+TNSEH+ +K+K +C
Sbjct: 8 SLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMC-D 66
Query: 69 ASGSEKRFFHHTEEMINAHPEFLDRAKPSLDARLEIXXXXXXXXXXXXXXXXIVQWGRPA 128
S KR H TEE + +P PSLD R +I I +WG+P
Sbjct: 67 KSTIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPK 126
Query: 129 TDITHLIVTTNAGAHAPGADVRFAALLGLRPTVRRTMIHLNGCSAGAAALRLAKDLAENS 188
+ ITH++ T +G PGAD + LLGLRP+V+R M++ GC AG LR+AKDLAEN+
Sbjct: 127 SKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENN 186
Query: 189 RGARVLVSCVELTVLTFRGPDCPH--TVNCQALFXXXXXXXXXXXXXXRPV-EQPMFEMV 245
RGARVLV C E+T +TFRGP H ++ QALF V E+P+FEMV
Sbjct: 187 RGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMV 246
Query: 246 SASQTLIPGTEHVITMQLTEHGLDGNIDAKELAPLAANNVKKCLSDALTPLGLDGGEWND 305
SA+QT++P ++ I L E GL ++ K++ L + N+ K L +A PLG+ +WN
Sbjct: 247 SAAQTILPDSDGAIDGHLREVGLTFHL-LKDVPGLISKNIVKSLDEAFKPLGIS--DWNS 303
Query: 306 LFWAVHPGSPLILDHIESALQLKPGKLAATRRVLREYGNMLGSTLIFVLDEQRRRMEEE- 364
LFW HPG P ILD +E L LK K+ ATR VL EYGNM + ++F+LDE RR+ ++
Sbjct: 304 LFWIAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDG 363
Query: 365 ----GDGAEWGVTLGFGPGFTIETMVLHA 389
G+G EWGV GFGPG T+ET+VLH+
Sbjct: 364 VATTGEGLEWGVLFGFGPGLTVETVVLHS 392
>AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386
Length = 385
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 208/380 (54%), Gaps = 7/380 (1%)
Query: 12 EHRRAERADGPATVLAIGTANPANCVTQLDYADFYCRVTNSEHLAGIKDKLDTLCVSASG 71
E ++ G ATVLA+G A P+N V+Q + + Y R ++L+ IKDKL LC S +
Sbjct: 8 EKQKRVAYQGKATVLALGKALPSNVVSQENLVEEYLREIKCDNLS-IKDKLQHLCKSTT- 65
Query: 72 SEKRFFHHTEEMINAHPEFLDRAKPSLDARLEIXXXXXXXXXXXXXXXXIVQWGRPATDI 131
+ R+ + E ++ +PE P++ RLEI I +WGR DI
Sbjct: 66 VKTRYTVMSRETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDI 125
Query: 132 THLIVTTNAGAHAPGADVRFAALLGLRPTVRRTMIHLNGCSAGAAALRLAKDLAENSRGA 191
THL+ +++ PG D+ +A LGL V+R M++ GC G + LR+AKD+AEN+ G+
Sbjct: 126 THLVYVSSSEFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGS 185
Query: 192 RVLVSCVELTVLTFRGPDC--PHTVNCQALFXXXXXXXXXXXXXXRPVEQPMFEMVSASQ 249
RVL++ E TVL FR P+ P+ + ALF E P E+ A Q
Sbjct: 186 RVLLTTSETTVLGFRPPNKARPYNLVGAALFGDGAAALIIGADPTES-ESPFMELHCAMQ 244
Query: 250 TLIPGTEHVITMQLTEHGLDGNIDAKELAPLAANNVKKCLSDALTPLGLDGGEWNDLFWA 309
+P T+ VI +L+E G+ + ++L +NV++ + G E NDLFWA
Sbjct: 245 QFLPQTQGVIDGRLSEEGITFKL-GRDLPQKIEDNVEEFCKKLVAKAGSGALELNDLFWA 303
Query: 310 VHPGSPLILDHIESALQLKPGKLAATRRVLREYGNMLGSTLIFVLDEQRRRMEEEG-DGA 368
VHPG P IL +E+ L+LKP KL +RR L +YGN+ +T+ +++D+ R +E++G +G
Sbjct: 304 VHPGGPAILSGLETKLKLKPEKLECSRRALMDYGNVSSNTIFYIMDKVRDELEKKGTEGE 363
Query: 369 EWGVTLGFGPGFTIETMVLH 388
EWG+ L FGPG T E ++
Sbjct: 364 EWGLGLAFGPGITFEGFLMR 383
>AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393
Length = 392
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/394 (34%), Positives = 208/394 (52%), Gaps = 16/394 (4%)
Query: 1 MGSLVAPVTVHEHRRAERADGPATVLAIGTANPANCVTQLDYADFYCRVTNSEHLAGIKD 60
MGS+ A V E + G AT+LA+G A P V Q D Y + T + +K
Sbjct: 1 MGSIDAAVLGSEKKSNP---GKATILALGKAFPHQLVMQEYLVDGYFKTTKCDD-PELKQ 56
Query: 61 KLDTLCVSASGSEKRFFHHTEEMINAHPEFLDRAKPSLDARLEIXXXXXXXXXXXXXXXX 120
KL LC + + + R+ +EE++ +PE ++ RL+I
Sbjct: 57 KLTRLCKTTT-VKTRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRAC 115
Query: 121 IVQWGRPATDITHLIVTTNAGAHAPGADVRFAALLGLRPTVRRTMIHLNGCSAGAAALRL 180
I WGR +DITH++ +++ A PG D+ A LGL P R +++ GCS G A LR+
Sbjct: 116 IKNWGRSISDITHVVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRV 175
Query: 181 AKDLAENSRGARVLVSCVELTVLTFRGP--DCPHTVNCQALFXXXXXXXXXXXXXXRPVE 238
AKD+AEN+ G+RVL++ E T++ F+ P D P+ + ALF E
Sbjct: 176 AKDIAENNPGSRVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICE 235
Query: 239 QPMFEMVSASQTLIPGTEHVITMQLTEHGLDGNIDAKELAPLAANNVKKCLSDALTPLGL 298
+P+FE+ +A Q +P TE I +LTE G++ + ++EL + +NV+ + GL
Sbjct: 236 KPLFELHTAIQNFLPETEKTIDGRLTEQGINFKL-SRELPQIIEDNVENFCKKLIGKAGL 294
Query: 299 DGGEWNDLFWAVHPGSPLILDHIESALQLKPGKLAATRRVLREYGNMLGSTLIFVLD--- 355
+N +FWAVHPG P IL+ IE L L P KL+ +RR L +YGN +++++VL+
Sbjct: 295 AHKNYNQMFWAVHPGGPAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYML 354
Query: 356 ---EQRRRMEEEGDGAEWGVTLGFGPGFTIETMV 386
++ R M EE + EWG+ L FGPG T E ++
Sbjct: 355 EESKKVRNMNEEEN--EWGLILAFGPGVTFEGII 386
>AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396
Length = 395
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 217/388 (55%), Gaps = 8/388 (2%)
Query: 5 VAPVTVHEHRRAERADGPATVLAIGTANPANCVTQLDYADFYCRVTNSEHLAGIKDKLDT 64
V ++ RR A G AT+LA+G A P+ V Q + + + R T + A IK+KL+
Sbjct: 9 VEKLSSKSTRRVANA-GKATLLALGKAFPSQVVPQENLVEGFLRDTKCDD-AFIKEKLEH 66
Query: 65 LCVSASGSEKRFFHHTEEMINAHPEFLDRAKPSLDARLEIXXXXXXXXXXXXXXXXIVQW 124
LC + + + R+ T E++ +PE P++ RLEI I +W
Sbjct: 67 LCKTTT-VKTRYTVLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEW 125
Query: 125 GRPATDITHLIVTTNAGAHAPGADVRFAALLGLRPTVRRTMIHLNGCSAGAAALRLAKDL 184
GRP DITH++ +++ PG D+ +A LGLR V R M++ GC G LR+AKD+
Sbjct: 126 GRPVEDITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDI 185
Query: 185 AENSRGARVLVSCVELTVLTFRGPDC--PHTVNCQALFXXXXXXXXXXXXXXRPVEQPMF 242
AEN+ G+RVL++ E T+L FR P+ P+ + ALF R E P
Sbjct: 186 AENNPGSRVLLTTSETTILGFRPPNKARPYDLVGAALF-GDGAAAVIIGADPRECEAPFM 244
Query: 243 EMVSASQTLIPGTEHVITMQLTEHGLDGNIDAKELAPLAANNVKKCLSDALTPLGLDGGE 302
E+ A Q +PGT++VI +LTE G++ + ++L N+++ + G + E
Sbjct: 245 ELHYAVQQFLPGTQNVIEGRLTEEGINFKL-GRDLPQKIEENIEEFCKKLMGKAGDESME 303
Query: 303 WNDLFWAVHPGSPLILDHIESALQLKPGKLAATRRVLREYGNMLGSTLIFVLDEQRRRME 362
+ND+FWAVHPG P IL+ +E+ L+L+ KL ++RR L +YGN+ +T+++V++ R ++
Sbjct: 304 FNDMFWAVHPGGPAILNRLETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELK 363
Query: 363 EEGDGA-EWGVTLGFGPGFTIETMVLHA 389
++GD A EWG+ L FGPG T E +++ +
Sbjct: 364 KKGDAAQEWGLGLAFGPGITFEGLLIRS 391
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,902,223
Number of extensions: 297850
Number of successful extensions: 647
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 634
Number of HSP's successfully gapped: 4
Length of query: 398
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 297
Effective length of database: 8,337,553
Effective search space: 2476253241
Effective search space used: 2476253241
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)