BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0510900 Os07g0510900|J065148J21
(101 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22010.1 | chr4:11663429-11666463 FORWARD LENGTH=542 132 2e-32
AT1G76160.1 | chr1:28578211-28581020 REVERSE LENGTH=542 129 4e-31
AT1G41830.1 | chr1:15603892-15607802 REVERSE LENGTH=543 128 6e-31
AT1G21850.1 | chr1:7667803-7670530 REVERSE LENGTH=552 120 2e-28
AT1G21860.1 | chr1:7671028-7674215 REVERSE LENGTH=539 115 5e-27
AT4G38420.1 | chr4:17982840-17985173 FORWARD LENGTH=550 114 9e-27
AT4G28090.1 | chr4:13961888-13964229 REVERSE LENGTH=548 109 3e-25
AT5G66920.1 | chr5:26722963-26725370 FORWARD LENGTH=547 89 4e-19
AT3G13400.1 | chr3:4355257-4357305 FORWARD LENGTH=552 89 6e-19
AT1G55560.1 | chr1:20754474-20756527 REVERSE LENGTH=550 84 1e-17
AT1G55570.1 | chr1:20757882-20759771 FORWARD LENGTH=556 80 2e-16
AT2G23630.1 | chr2:10052581-10055311 REVERSE LENGTH=542 80 3e-16
AT3G13390.1 | chr3:4351401-4353289 REVERSE LENGTH=555 79 5e-16
AT4G37160.1 | chr4:17494820-17497124 REVERSE LENGTH=542 78 8e-16
AT1G75790.1 | chr1:28454980-28457388 REVERSE LENGTH=546 74 1e-14
AT5G51480.1 | chr5:20910433-20913153 FORWARD LENGTH=593 67 1e-12
AT4G25240.1 | chr4:12930539-12933563 FORWARD LENGTH=590 67 2e-12
AT5G48450.1 | chr5:19632791-19635612 REVERSE LENGTH=622 65 5e-12
AT4G12420.1 | chr4:7349941-7352868 REVERSE LENGTH=588 64 2e-11
>AT4G22010.1 | chr4:11663429-11666463 FORWARD LENGTH=542
Length = 541
Score = 132 bits (333), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 65/71 (91%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP +WTAIY+ LDNVGMWN+RSENWARQYLGQQFYLRV+TSSTS+RDEYP PKNAL+C
Sbjct: 471 QVYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMC 530
Query: 91 GRAAGRRTRPL 101
GRA GR TRP
Sbjct: 531 GRAKGRHTRPF 541
>AT1G76160.1 | chr1:28578211-28581020 REVERSE LENGTH=542
Length = 541
Score = 129 bits (323), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 64/71 (90%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP+SWTAI + LDNVGMWN+RSE WARQYLGQQ YLRV+T STS RDEYPIPKNALLC
Sbjct: 471 QVYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLC 530
Query: 91 GRAAGRRTRPL 101
GRA+GR TRPL
Sbjct: 531 GRASGRSTRPL 541
>AT1G41830.1 | chr1:15603892-15607802 REVERSE LENGTH=543
Length = 542
Score = 128 bits (321), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 63/71 (88%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWTAIY+ LDNVGMWN+RSE WARQYLGQQ YLRV+TSSTS RDEYPIPKN+ LC
Sbjct: 472 QVYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRLC 531
Query: 91 GRAAGRRTRPL 101
GRA GR TRPL
Sbjct: 532 GRARGRHTRPL 542
>AT1G21850.1 | chr1:7667803-7670530 REVERSE LENGTH=552
Length = 551
Score = 120 bits (300), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/68 (79%), Positives = 58/68 (85%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWTAIY+ LDNVGMWN+RSE W RQYLGQQFY+RV+T STS RDEY IPKNALLC
Sbjct: 471 QVYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALLC 530
Query: 91 GRAAGRRT 98
GRA G T
Sbjct: 531 GRATGHHT 538
>AT1G21860.1 | chr1:7671028-7674215 REVERSE LENGTH=539
Length = 538
Score = 115 bits (287), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 58/64 (90%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWTAIY+ LDNVGMWN+RSE W RQYLGQQFY+RV+T+STS RDEY IPKNALLC
Sbjct: 471 QVYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLC 530
Query: 91 GRAA 94
GRA+
Sbjct: 531 GRAS 534
>AT4G38420.1 | chr4:17982840-17985173 FORWARD LENGTH=550
Length = 549
Score = 114 bits (286), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 60/70 (85%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWTA+Y+ LDNVGMWN+RSE WARQYLGQQFYLRV++ + S RDEY +PKNALLC
Sbjct: 480 QVYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLC 539
Query: 91 GRAAGRRTRP 100
GRA+ + T P
Sbjct: 540 GRASNKHTTP 549
>AT4G28090.1 | chr4:13961888-13964229 REVERSE LENGTH=548
Length = 547
Score = 109 bits (272), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 58/66 (87%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWTA+Y+ LDNVGMWN+RS+ WARQYLGQQFYLRV + + S +DEYP+PKNALLC
Sbjct: 475 QVYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNALLC 534
Query: 91 GRAAGR 96
GRA+ +
Sbjct: 535 GRASNK 540
>AT5G66920.1 | chr5:26722963-26725370 FORWARD LENGTH=547
Length = 546
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 46/66 (69%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWT I + LDN GMWN+RS W RQY GQQFYL+VW S S +EY P N LC
Sbjct: 479 QVYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYNPPDNLQLC 538
Query: 91 GRAAGR 96
G+A GR
Sbjct: 539 GKAVGR 544
>AT3G13400.1 | chr3:4355257-4357305 FORWARD LENGTH=552
Length = 551
Score = 88.6 bits (218), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 45/65 (69%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SW+AI + DN GMWN+RSENW R+YLGQQ Y+ V + S RDEY IP N LC
Sbjct: 478 QVYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLC 537
Query: 91 GRAAG 95
G G
Sbjct: 538 GIVKG 542
>AT1G55560.1 | chr1:20754474-20756527 REVERSE LENGTH=550
Length = 549
Score = 84.0 bits (206), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SW+AI + DN GMWN+RSEN R+YLG+Q Y+ V + S RDEY IP N LC
Sbjct: 477 QVYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLC 536
Query: 91 GRAAG 95
G G
Sbjct: 537 GIVKG 541
>AT1G55570.1 | chr1:20757882-20759771 FORWARD LENGTH=556
Length = 555
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP W AI + DN GMWN+RSEN R+YLGQQ Y V + S RDEY +P+ +L C
Sbjct: 481 QVYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQC 540
Query: 91 GRAAGR 96
G G+
Sbjct: 541 GLVKGK 546
>AT2G23630.1 | chr2:10052581-10055311 REVERSE LENGTH=542
Length = 541
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWT+I + LDN GMWN+RS+ W+R+YLGQ+ Y+RVW + S E P N L C
Sbjct: 473 QVYPMSWTSILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFC 532
Query: 91 GRAAGRR 97
G+A R
Sbjct: 533 GKAKHPR 539
>AT3G13390.1 | chr3:4351401-4353289 REVERSE LENGTH=555
Length = 554
Score = 79.0 bits (193), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 42/65 (64%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP W AI + DN GMWNVRSEN R+YLGQQ Y V + S RDEY +P+ +L C
Sbjct: 480 QVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQC 539
Query: 91 GRAAG 95
G G
Sbjct: 540 GLVKG 544
>AT4G37160.1 | chr4:17494820-17497124 REVERSE LENGTH=542
Length = 541
Score = 78.2 bits (191), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP SWT I + LDN GMWN+RS+ W+R+YLGQ+ Y+RVW S E P N L C
Sbjct: 475 QVYPLSWTTILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWNDEKSLYTEAEPPLNVLYC 534
Query: 91 GRAAGRRTRPL 101
G+A RPL
Sbjct: 535 GKAK----RPL 541
>AT1G75790.1 | chr1:28454980-28457388 REVERSE LENGTH=546
Length = 545
Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 6/68 (8%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVW------TSSTSWRDEYPIP 84
QVYP SWTAI + +DN GMWNVRS+ + YLGQ+ Y+RV S+ RDE PIP
Sbjct: 476 QVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGEGEEDPSTIPVRDENPIP 535
Query: 85 KNALLCGR 92
N + CG+
Sbjct: 536 GNVIRCGK 543
>AT5G51480.1 | chr5:20910433-20913153 FORWARD LENGTH=593
Length = 592
Score = 67.4 bits (163), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
+VYP +WTA+ + LDNVG+WN+R EN R YLGQ+ Y+R+ + E P+N + C
Sbjct: 491 EVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYC 550
Query: 91 G 91
G
Sbjct: 551 G 551
>AT4G25240.1 | chr4:12930539-12933563 FORWARD LENGTH=590
Length = 589
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
+VYP WTA+ + LDNVG+WN+R EN R YLG++ Y+R+ + E P N L C
Sbjct: 491 EVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYC 550
Query: 91 G 91
G
Sbjct: 551 G 551
>AT5G48450.1 | chr5:19632791-19635612 REVERSE LENGTH=622
Length = 621
Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSW-RDEYPIPKNALL 89
QV+P +WTA+ + LDN GMWN+R +N A YLGQ+ YL V E +PKN++
Sbjct: 482 QVFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIY 541
Query: 90 CGR 92
CGR
Sbjct: 542 CGR 544
>AT4G12420.1 | chr4:7349941-7352868 REVERSE LENGTH=588
Length = 587
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 31 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 90
QVYP +W+AI + LDN G WN+R+EN YLGQ+ Y+RV + + E+ P N L C
Sbjct: 488 QVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYC 547
Query: 91 G 91
G
Sbjct: 548 G 548
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.133 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,497,081
Number of extensions: 93070
Number of successful extensions: 194
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 192
Number of HSP's successfully gapped: 19
Length of query: 101
Length of database: 11,106,569
Length adjustment: 71
Effective length of query: 30
Effective length of database: 9,160,033
Effective search space: 274800990
Effective search space used: 274800990
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 104 (44.7 bits)