BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0506000 Os07g0506000|AK068687
(301 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21570.1 | chr4:11471126-11472269 REVERSE LENGTH=295 457 e-129
AT1G11200.1 | chr1:3753896-3755459 FORWARD LENGTH=296 437 e-123
AT1G77220.1 | chr1:29013232-29015530 FORWARD LENGTH=485 131 4e-31
AT4G38360.2 | chr4:17967389-17969798 FORWARD LENGTH=486 121 5e-28
AT1G23070.1 | chr1:8174011-8175758 REVERSE LENGTH=404 109 2e-24
AT5G26740.1 | chr5:9292436-9294407 FORWARD LENGTH=423 106 1e-23
AT3G05940.1 | chr3:1777592-1779648 REVERSE LENGTH=423 100 1e-21
>AT4G21570.1 | chr4:11471126-11472269 REVERSE LENGTH=295
Length = 294
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 211/293 (72%), Positives = 256/293 (87%)
Query: 9 MDLTKMDAPTLTLLGAACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAIN 68
MDLTK+ P +T +A V+L++HFT+QLVSQHLF+WKNPKEQKAILIIVLMAP+YA+
Sbjct: 2 MDLTKLKPPQITFYCSAFSVLLTLHFTIQLVSQHLFHWKNPKEQKAILIIVLMAPIYAVV 61
Query: 69 SFVGLLDIKGSKTFFTFLDAVKECYEALAIAKFMALMYSYLNISISKNIVPDEIKGRVLH 128
SF+GLL++KGS+TFF FL+++KECYEAL IAKF+ALMYSYLNIS+SKNI+PD IKGR +H
Sbjct: 62 SFIGLLEVKGSETFFLFLESIKECYEALVIAKFLALMYSYLNISMSKNILPDGIKGREIH 121
Query: 129 HSFPVSLFLPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITLQLLGLYPSWVSWTFTI 188
HSFP++LF P VRL+ TLKLLKYWTWQFVV+RP+C+ LMI LQL+G YPSW+SWTFTI
Sbjct: 122 HSFPMTLFQPHVVRLDRHTLKLLKYWTWQFVVIRPVCSTLMIALQLIGFYPSWLSWTFTI 181
Query: 189 ILNFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGIIQ 248
I+NFSVS+ALY+LVIFYH+FAKELAPH PLAKFLCIKGIVFF FWQG AL++L A+G I+
Sbjct: 182 IVNFSVSLALYSLVIFYHVFAKELAPHNPLAKFLCIKGIVFFVFWQGIALDILVAMGFIK 241
Query: 249 SHHFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVAPYSGADRAKFEKKNE 301
SHHFWL+VE IQEAIQNVLV +EMV F+ +Q++AYH PYSG + K +KK E
Sbjct: 242 SHHFWLEVEQIQEAIQNVLVCLEMVIFAAVQKHAYHAGPYSGETKKKLDKKTE 294
>AT1G11200.1 | chr1:3753896-3755459 FORWARD LENGTH=296
Length = 295
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 199/294 (67%), Positives = 249/294 (84%), Gaps = 2/294 (0%)
Query: 9 MDLTKMDAPTLTLLGAACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAIN 68
+DL+ + +T++G+ CV+LSMHFT+QLVSQHLFYWK P EQ+AILIIVLMAP+YAIN
Sbjct: 2 IDLSTLSPAEITVMGSVFCVLLSMHFTMQLVSQHLFYWKKPNEQRAILIIVLMAPVYAIN 61
Query: 69 SFVGLLDIKGSKTFFTFLDAVKECYEALAIAKFMALMYSYLNISISKNIVPDEIKGRVLH 128
SFVGLLD KGSK FF FLDAVKECYEAL IAKF+ALMYSY+NIS+S I+PDE KGR +H
Sbjct: 62 SFVGLLDAKGSKPFFMFLDAVKECYEALVIAKFLALMYSYVNISMSARIIPDEFKGREIH 121
Query: 129 HSFPVSLFLPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITLQLLGLYPSWVSWTFTI 188
HSFP++LF+PR L++ TLK LK WTWQF ++RP+C+ILMITLQ+LG+YP W+SW FT
Sbjct: 122 HSFPMTLFVPRTTHLDYLTLKQLKQWTWQFCIIRPVCSILMITLQILGIYPVWLSWIFTA 181
Query: 189 ILNFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGIIQ 248
ILN SVS+ALY+LV FYH+FAKEL PHKPL KF+C+KGIVFF FWQG L++L +G+I+
Sbjct: 182 ILNVSVSLALYSLVKFYHVFAKELEPHKPLTKFMCVKGIVFFCFWQGIVLKILVGLGLIK 241
Query: 249 SHHFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVAPYSGADRAK--FEKKN 300
SHHFWL+V+ ++EA+QNVLV +EM+ FS++QQYA+HVAPYSG AK F K++
Sbjct: 242 SHHFWLEVDQLEEALQNVLVCLEMIVFSIIQQYAFHVAPYSGETEAKMRFNKRD 295
>AT1G77220.1 | chr1:29013232-29015530 FORWARD LENGTH=485
Length = 484
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 165/308 (53%), Gaps = 29/308 (9%)
Query: 7 PGMDLTKMDAPTLTLLGAACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYA 66
P + + T +L A+ V++++ + L+ +HL + P+EQK ++ ++LM P+YA
Sbjct: 29 PNLGVDSGQYLTWPILSASVFVVIAILLPMYLIFEHLASYNQPEEQKFLIGLILMVPVYA 88
Query: 67 INSFVGLLDIKGSKTFFTFLDAVKECYEALAIAKFMALMYSYLN--------------IS 112
+ SF+ L++ S+ F + +++CYEA A+ F + + L+ I+
Sbjct: 89 VESFLSLVN---SEAAFN-CEVIRDCYEAFALYCFERYLIACLDGEERTIEFMEQQTVIT 144
Query: 113 ISKNIVPDEIKGRVLHHSFPVSLFLPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITL 172
S ++ V+ H FP++ F+ ++ L + +K Q+++++ ICA+L + L
Sbjct: 145 QSTPLLEGTCSYGVVEHPFPMNCFV-KDWSLGPQFYHAVKIGIVQYMILKMICALLAMIL 203
Query: 173 QLLGLYPSW-VSWTF-----TIILNFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKG 226
+ G+Y +W + ++LNFS + ALY LV FY++ +LAP KPLAKFL K
Sbjct: 204 EAFGVYGEGKFAWNYGYPYLAVVLNFSQTWALYCLVQFYNVIKDKLAPIKPLAKFLTFKS 263
Query: 227 IVFFSFWQGFALEVLAAVGIIQSHHFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVA 286
IVF ++WQG + L ++G+++ + ++ IQ+ ++ IEM +V+ Y + A
Sbjct: 264 IVFLTWWQGIIVAFLFSMGLVKGSL----AKELKTRIQDYIICIEMGIAAVVHLYVFPAA 319
Query: 287 PYSGADRA 294
PY +R
Sbjct: 320 PYKRGERC 327
>AT4G38360.2 | chr4:17967389-17969798 FORWARD LENGTH=486
Length = 485
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 150/287 (52%), Gaps = 29/287 (10%)
Query: 24 AACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAINSFVGLLDIKGSKTFF 83
A ++L++ ++ LV HL +KNP+EQK ++ ++LM P Y+I SF L+ +
Sbjct: 24 AGAFLVLTLSLSLFLVFDHLSTYKNPEEQKFLIGVILMVPCYSIESFASLV----KPSIS 79
Query: 84 TFLDAVKECYEALAIAKFMALMYSYLNISISKNIVPDEIKGR---------------VLH 128
+++CYE+ A+ F + + + + I E +GR ++
Sbjct: 80 VDCGILRDCYESFAMYCFGRYLVACIG-GEERTIEFMERQGRKSFKTPLLDHKDEKGIIK 138
Query: 129 HSFPVSLFLPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITLQLLGLY-PSWVSWT-- 185
H FP++LFL + RL +++K+ Q+++++ + A+ + L+ G+Y W
Sbjct: 139 HPFPMNLFL-KPWRLSPWFYQVVKFGIVQYMIIKSLTALTALILEAFGVYCEGEFKWGCG 197
Query: 186 ---FTIILNFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLA 242
++LNFS S ALY LV FY ELA +PLAKFL K IVF ++WQG A+ +L+
Sbjct: 198 YPYLAVVLNFSQSWALYCLVQFYGATKDELAHIQPLAKFLTFKSIVFLTWWQGVAIALLS 257
Query: 243 AVGIIQSHHFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVAPYS 289
++G+ +S ++ ++Q+ ++ IEM SV+ Y + PY
Sbjct: 258 SLGLFKSS--IAQSLQLKTSVQDFIICIEMGIASVVHLYVFPAKPYG 302
>AT1G23070.1 | chr1:8174011-8175758 REVERSE LENGTH=404
Length = 403
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 140/291 (48%), Gaps = 33/291 (11%)
Query: 17 PTLTLLGAACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAINSFVGLLDI 76
P+L + G+ V + + ++ + QHL ++ NP EQK I+ ++ M P+YA S + L +
Sbjct: 15 PSLIIGGSFATVAICL--SLYSILQHLRFYTNPAEQKWIVSVLFMVPVYATESIISLSNS 72
Query: 77 KGSKTFFTFLDAVKECYEALAIAKFMALMYSYLNISISKNIVP---DEIKGRVLHHSFPV 133
K F D ++ CYEA A+ F + + + L + +V +E K +L
Sbjct: 73 K----FSLPCDILRNCYEAFALYSFGSYLVACLGGE--RRVVEYLENESKKPLLEEGANE 126
Query: 134 SL----------FLPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITLQLLGLYPSW-V 182
S FL L + + K+ Q+++++ CA L L+LLG+Y
Sbjct: 127 SKKKKKKNSFWKFLCDPYVLGRELFVIEKFGLVQYMILKTFCAFLTFLLELLGVYGDGEF 186
Query: 183 SWTF-----TIILNFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFA 237
W + ++LNFS AL+ LV FY++ + L KPLAKF+ K IVF ++WQGF
Sbjct: 187 KWYYGYPYIVVVLNFSQMWALFCLVQFYNVTHERLKEIKPLAKFISFKAIVFATWWQGFG 246
Query: 238 LEVLAAVGIIQSHHFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVAPY 288
+ +L GI+ Q +Q+ L+ IEM +V + + PY
Sbjct: 247 IALLCYYGILPKEG------RFQNGLQDFLICIEMAIAAVAHLFVFPAEPY 291
>AT5G26740.1 | chr5:9292436-9294407 FORWARD LENGTH=423
Length = 422
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 20/272 (7%)
Query: 27 CVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAINSFVGLLDIKGSKTFFTFL 86
C + ++ + + +HL + P Q+ I+ I+ M P+YA SF+ L+ K S +
Sbjct: 16 CTVGAIALAIFHIYRHLLNYTEPTYQRYIVRIIFMVPVYAFMSFLSLVLPKSS----IYF 71
Query: 87 DAVKECYEALAIAKFMALMYSYLNISISKNIVPDEIKGRVLHHSFPVSLFLPRNVRLEHK 146
D+++E YEA I F++L +++ V + GR L S+ + + L+ +
Sbjct: 72 DSIREVYEAWVIYNFLSLCLAWVG---GPGSVVLSLSGRSLKPSWSLMTCCFPPLTLDGR 128
Query: 147 TLKLLKYWTWQFVVVRPICAILMITLQLLGLY------PSWVSWTFTIILNFSVSMALYA 200
++ K QFV+++PI + + L G Y P TII S ++ALYA
Sbjct: 129 FIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFNPDQAYLYLTIIYTISYTVALYA 188
Query: 201 LVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGIIQSHHFWLDVEHIQ 260
LV+FY L P P+ KF+ IK +VF ++WQG + + A G I+S
Sbjct: 189 LVLFYMACRDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLAAKSGFIKS-------AEAA 241
Query: 261 EAIQNVLVIIEMVFFSVLQQYAYHVAPYSGAD 292
QN ++ +EM+ + YA+ Y+GA+
Sbjct: 242 AHFQNFIICVEMLIAAACHFYAFPYKEYAGAN 273
>AT3G05940.1 | chr3:1777592-1779648 REVERSE LENGTH=423
Length = 422
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 17 PTLTLLGAACCVMLSMHFTVQLVSQHLFYWKNPKEQKAILIIVLMAPLYAINSFVGLLDI 76
P ++ A C + ++ + + +HL + P Q+ I+ IV M P+YA+ SF+ L+
Sbjct: 6 PIYLIILAFLCTVGAIALALFHIYKHLLNYTEPIYQRYIVRIVFMVPVYALMSFLALVLP 65
Query: 77 KGSKTFFTFLDAVKECYEALAIAKFMALMYSYLNISISKNIVPDEIKGRVLHHSFPVSLF 136
K S + ++++E YEA I F++L +++ S I + GR L S+ +
Sbjct: 66 KSS----IYFNSIREVYEAWVIYNFLSLCLAWVGGPGSVVI---SLTGRSLKPSWHLMTC 118
Query: 137 LPRNVRLEHKTLKLLKYWTWQFVVVRPICAILMITLQLLGLY------PSWVSWTFTIIL 190
+ L+ + ++ K QFV+++PI + + L G Y P TII
Sbjct: 119 CIPPLPLDGRFIRRCKQGCLQFVILKPILVAVTLVLYAKGKYKDGNFSPDQSYLYLTIIY 178
Query: 191 NFSVSMALYALVIFYHLFAKELAPHKPLAKFLCIKGIVFFSFWQGFALEVLAAVGIIQSH 250
S ++ALYALV+FY L P P+ KF+ IK +VF ++WQG + + A G I+
Sbjct: 179 TISYTVALYALVLFYVACKDLLQPFNPVPKFVIIKSVVFLTYWQGVLVFLFAKSGFIRD- 237
Query: 251 HFWLDVEHIQEAIQNVLVIIEMVFFSVLQQYAYHVAPYSGAD 292
E QN ++ +EM+ + YA+ Y+ A+
Sbjct: 238 ------EEEAALFQNFIICVEMLIAAAAHFYAFPYKEYAEAN 273
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.330 0.141 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,924,196
Number of extensions: 222473
Number of successful extensions: 671
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 654
Number of HSP's successfully gapped: 7
Length of query: 301
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 203
Effective length of database: 8,419,801
Effective search space: 1709219603
Effective search space used: 1709219603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 111 (47.4 bits)