BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0505200 Os07g0505200|Os07g0505200
(216 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175 125 2e-29
AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132 122 1e-28
AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182 122 2e-28
AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928 119 1e-27
AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376 118 3e-27
AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406 116 8e-27
AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334 114 5e-26
AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355 112 2e-25
AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882 110 6e-25
AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036 107 7e-24
AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420 106 8e-24
AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397 106 1e-23
AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989 105 2e-23
AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394 104 3e-23
AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360 102 2e-22
AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360 102 2e-22
AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819 81 5e-16
>AT1G53160.2 | chr1:19806478-19807080 FORWARD LENGTH=175
Length = 174
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 69/84 (82%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQV+RC D+ EA Y+RRHKVC+ H+K V ++GL QRFCQQCSRFH+L EFD+AKRS
Sbjct: 54 CQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRS 113
Query: 170 CRRRLAGHNERRRKSAADTAHGEN 193
CRRRLAGHNERRRKS+ ++ +GE
Sbjct: 114 CRRRLAGHNERRRKSSGESTYGEG 137
>AT2G33810.1 | chr2:14305342-14305828 FORWARD LENGTH=132
Length = 131
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 66/78 (84%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQVE C D+S+A +Y++RHKVCQ H+K P V ++GL QRFCQQCSRFH L+EFD+AKRS
Sbjct: 54 CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRS 113
Query: 170 CRRRLAGHNERRRKSAAD 187
CRRRLAGHNERRRKS D
Sbjct: 114 CRRRLAGHNERRRKSTTD 131
>AT3G15270.1 | chr3:5140624-5141256 REVERSE LENGTH=182
Length = 181
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 67/79 (84%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQV+RC V+L+EA +Y RRH+VC+ H+K VAG+RQRFCQQCSRFHEL EFD+AKRS
Sbjct: 63 CQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRS 122
Query: 170 CRRRLAGHNERRRKSAADT 188
CRRRLAGHNERRRK + D+
Sbjct: 123 CRRRLAGHNERRRKISGDS 141
>AT3G60030.1 | chr3:22165856-22169410 REVERSE LENGTH=928
Length = 927
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 65/92 (70%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQV+ CG DLS+ Y+RRHKVC+ HSK LV G+ QRFCQQCSRFH L EFD+ KRS
Sbjct: 127 CQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDEGKRS 186
Query: 170 CRRRLAGHNERRRKSAADTAHGENCRHADQDA 201
CRRRLAGHN+RRRK+ DT DQ +
Sbjct: 187 CRRRLAGHNKRRRKANPDTIGNGTSMSDDQTS 218
>AT2G42200.1 | chr2:17587601-17589451 FORWARD LENGTH=376
Length = 375
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 60/75 (80%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQVE CG+DL+ A Y RH+VC HSK P V VAG+ QRFCQQCSRFH+L EFD KR
Sbjct: 73 RCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKR 132
Query: 169 SCRRRLAGHNERRRK 183
SCRRRLAGHNERRRK
Sbjct: 133 SCRRRLAGHNERRRK 147
>AT1G69170.1 | chr1:26005626-26007041 FORWARD LENGTH=406
Length = 405
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 61/76 (80%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQV C DLS + Y++RH+VC+ HSK VV+V GL QRFCQQCSRFH L+EFDD KRS
Sbjct: 124 CQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRS 183
Query: 170 CRRRLAGHNERRRKSA 185
CRRRLAGHNERRRK A
Sbjct: 184 CRRRLAGHNERRRKPA 199
>AT1G02065.1 | chr1:365625-367149 FORWARD LENGTH=334
Length = 333
Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 67/100 (67%), Gaps = 6/100 (6%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQ E C DLS A Y+RRHKVC+ HSK V+ AGL QRFCQQCSRFH L+EFD+ KR
Sbjct: 187 RCQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKR 246
Query: 169 SCRRRLAGHNERRRK------SAADTAHGENCRHADQDAG 202
SCR+RLA HN RRRK + DT G+ + D+G
Sbjct: 247 SCRKRLADHNRRRRKCHQSASATQDTGTGKTTPKSPNDSG 286
>AT3G57920.1 | chr3:21444450-21445852 REVERSE LENGTH=355
Length = 354
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 60/81 (74%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQVE C +DLS Y RHKVC HSK V+V+GL QRFCQQCSRFH+L+EFD KR
Sbjct: 58 RCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEKR 117
Query: 169 SCRRRLAGHNERRRKSAADTA 189
SCRRRLA HNERRRK TA
Sbjct: 118 SCRRRLACHNERRRKPQPTTA 138
>AT2G47070.1 | chr2:19337144-19340552 FORWARD LENGTH=882
Length = 881
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 58/75 (77%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQVE C DLS+ Y+RRHKVC+ HSK V G+ QRFCQQCSRFH L EFD+ KRS
Sbjct: 106 CQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGKRS 165
Query: 170 CRRRLAGHNERRRKS 184
CRRRLAGHN+RRRK+
Sbjct: 166 CRRRLAGHNKRRRKT 180
>AT1G20980.1 | chr1:7325042-7328933 FORWARD LENGTH=1036
Length = 1035
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 57/76 (75%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQV+ C DLS A Y+RRHKVC+ HSK LV QRFCQQCSRFH L+EFD+ KRS
Sbjct: 120 CQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 179
Query: 170 CRRRLAGHNERRRKSA 185
CRRRLAGHN RRRK+
Sbjct: 180 CRRRLAGHNRRRRKTT 195
>AT5G43270.2 | chr5:17360527-17362143 REVERSE LENGTH=420
Length = 419
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
CQVE C +DLS A Y+R+H++C+ HSK P V+V+G+ +RFCQQCSRFH L+EFD+ KRS
Sbjct: 169 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 228
Query: 170 CRRRLAGHNERRRK 183
CRRRL+ HN RRRK
Sbjct: 229 CRRRLSDHNARRRK 242
>AT1G27370.1 | chr1:9505454-9506997 REVERSE LENGTH=397
Length = 396
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQ++ C +DLS + Y+R+H+VC+THSK P V+V+GL +RFCQQCSRFH ++EFD+ KR
Sbjct: 175 RCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKR 234
Query: 169 SCRRRLAGHNERRRK 183
SCR+RL+ HN RRRK
Sbjct: 235 SCRKRLSHHNARRRK 249
>AT1G76580.1 | chr1:28734600-28738451 FORWARD LENGTH=989
Length = 988
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 58/79 (73%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
+CQV+ C DLS A Y+RRHKVC+ HSK LV QRFCQQCSRFH L+EFD+ KR
Sbjct: 81 KCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKR 140
Query: 169 SCRRRLAGHNERRRKSAAD 187
SCRRRL GHN RRRK+ D
Sbjct: 141 SCRRRLDGHNRRRRKTQPD 159
>AT1G27360.1 | chr1:9502139-9503715 FORWARD LENGTH=394
Length = 393
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 61/75 (81%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQ++ C +DLS A Y+R+HKVC+ HSK P V V+GL +RFCQQCSRFH ++EFD+ KR
Sbjct: 174 RCQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKR 233
Query: 169 SCRRRLAGHNERRRK 183
SCR+RL+ HN RRRK
Sbjct: 234 SCRKRLSHHNARRRK 248
>AT5G50670.1 | chr5:20615897-20617133 REVERSE LENGTH=360
Length = 359
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
C V+ C D S Y++RHKVC HSK PVV + G +QRFCQQCSRFH L EFD+ KRS
Sbjct: 101 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRS 160
Query: 170 CRRRLAGHNERRRK 183
CR+RL GHN RRRK
Sbjct: 161 CRKRLDGHNRRRRK 174
>AT5G50570.1 | chr5:20582555-20583791 REVERSE LENGTH=360
Length = 359
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%)
Query: 110 CQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRS 169
C V+ C D S Y++RHKVC HSK PVV + G +QRFCQQCSRFH L EFD+ KRS
Sbjct: 101 CLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRS 160
Query: 170 CRRRLAGHNERRRK 183
CR+RL GHN RRRK
Sbjct: 161 CRKRLDGHNRRRRK 174
>AT5G18830.3 | chr5:6276116-6280362 FORWARD LENGTH=819
Length = 818
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 109 RCQVERCGVDLSEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKR 168
RCQV C D+SE Y++RH+VC + V++ G +R+CQQC +FH L +FD+ KR
Sbjct: 137 RCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKR 196
Query: 169 SCRRRLAGHNERRRKSAAD 187
SCRR+L HN RR++ D
Sbjct: 197 SCRRKLERHNNRRKRKPVD 215
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,159,485
Number of extensions: 100398
Number of successful extensions: 202
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 202
Number of HSP's successfully gapped: 17
Length of query: 216
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 122
Effective length of database: 8,529,465
Effective search space: 1040594730
Effective search space used: 1040594730
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)