BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0501100 Os07g0501100|AK110924
(405 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396 383 e-106
AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393 271 3e-73
AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386 260 1e-69
AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396 255 3e-68
>AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396
Length = 395
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/385 (48%), Positives = 255/385 (66%), Gaps = 6/385 (1%)
Query: 18 STHEIRRAQRADGPATVLAIGTANPETCVPQDEYADFYFRVTKSEHLPELKNKLRRICNK 77
S EIR+AQRADGPA +LAIGTANPE V Q EY D+YFR+T SEH+ +LK K +R+C+K
Sbjct: 8 SLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDK 67
Query: 78 SGIEKRFMFVNDDVMEAHPEFADRHLTSLDARVEIVSKVVPELXXXXXXXXXXEWGRPAT 137
S I KR M + ++ ++ +P SLD R +IV VP+L EWG+P +
Sbjct: 68 STIRKRHMHLTEEFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKS 127
Query: 138 DITHLIFSTYSGVKAPGGDRLLASLLGLRPTVSRTVLSLHGCYGGGRALQLAKELAENNR 197
ITH++F T SGV PG D L LLGLRP+V R ++ GC+ GG L++AK+LAENNR
Sbjct: 128 KITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNR 187
Query: 198 GARVLVACAESTLIAFYGPEVGCNDTIIGQALFGDGSGAVIVGADPVGAV-ERPLFEMAF 256
GARVLV C+E T + F GP D+++GQALF DG+ A+IVG+DP +V E+P+FEM
Sbjct: 188 GARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVS 247
Query: 257 ASQATVPDSEGAITMQHKKGGMDYHIGGGVPEMLAGSIERCLADAFGAIGVAARWRDLFW 316
A+Q +PDS+GAI ++ G+ +H+ VP +++ +I + L +AF +G+ + W LFW
Sbjct: 248 AAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGI-SDWNSLFW 306
Query: 317 AVHPGGRRILDLIEEALGLDNGAMAASRQVLREYGNMSGTTVIFVLNELRRRFVADGA-- 374
HPGG ILD +E LGL M A+R VL EYGNMS V+F+L+E+RR+ DG
Sbjct: 307 IAHPGGPAILDQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVAT 366
Query: 375 --EGADWGALMAFGPGVTVETILLR 397
EG +WG L FGPG+TVET++L
Sbjct: 367 TGEGLEWGVLFGFGPGLTVETVVLH 391
>AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393
Length = 392
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 224/372 (60%), Gaps = 5/372 (1%)
Query: 30 GPATVLAIGTANPETCVPQDEYADFYFRVTKSEHLPELKNKLRRICNKSGIEKRFMFVND 89
G AT+LA+G A P V Q+ D YF+ TK + PELK KL R+C + ++ R++ +++
Sbjct: 18 GKATILALGKAFPHQLVMQEYLVDGYFKTTKCDD-PELKQKLTRLCKTTTVKTRYVVMSE 76
Query: 90 DVMEAHPEFADRHLTSLDARVEIVSKVVPELXXXXXXXXXXEWGRPATDITHLIFSTYSG 149
++++ +PE A +++ R++I + V E+ WGR +DITH+++ + S
Sbjct: 77 EILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVVYVSSSE 136
Query: 150 VKAPGGDRLLASLLGLRPTVSRTVLSLHGCYGGGRALQLAKELAENNRGARVLVACAEST 209
+ PGGD LA LGL P R +L GC GG L++AK++AENN G+RVL+A +E+T
Sbjct: 137 ARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETT 196
Query: 210 LIAFYGPEVGCNDTIIGQALFGDGSGAVIVGADPVGAVERPLFEMAFASQATVPDSEGAI 269
+I F P V ++G ALFGDG+GA+I+G+DP E+PLFE+ A Q +P++E I
Sbjct: 197 IIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPLFELHTAIQNFLPETEKTI 256
Query: 270 TMQHKKGGMDYHIGGGVPEMLAGSIERCLADAFGAIGVAAR-WRDLFWAVHPGGRRILDL 328
+ + G+++ + +P+++ ++E G G+A + + +FWAVHPGG IL+
Sbjct: 257 DGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGGPAILNR 316
Query: 329 IEEALGLDNGAMAASRQVLREYGNMSGTTVIFVLN---ELRRRFVADGAEGADWGALMAF 385
IE+ L L ++ SR+ L +YGN S ++++VL E ++ E +WG ++AF
Sbjct: 317 IEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESKKVRNMNEEENEWGLILAF 376
Query: 386 GPGVTVETILLR 397
GPGVT E I+ R
Sbjct: 377 GPGVTFEGIIAR 388
>AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386
Length = 385
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 210/370 (56%), Gaps = 3/370 (0%)
Query: 29 DGPATVLAIGTANPETCVPQDEYADFYFRVTKSEHLPELKNKLRRICNKSGIEKRFMFVN 88
G ATVLA+G A P V Q+ + Y R K ++L +K+KL+ +C + ++ R+ ++
Sbjct: 16 QGKATVLALGKALPSNVVSQENLVEEYLREIKCDNL-SIKDKLQHLCKSTTVKTRYTVMS 74
Query: 89 DDVMEAHPEFADRHLTSLDARVEIVSKVVPELXXXXXXXXXXEWGRPATDITHLIFSTYS 148
+ + +PE A ++ R+EI + V ++ EWGR DITHL++ + S
Sbjct: 75 RETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDITHLVYVSSS 134
Query: 149 GVKAPGGDRLLASLLGLRPTVSRTVLSLHGCYGGGRALQLAKELAENNRGARVLVACAES 208
+ PGGD L++ LGL V R +L GCYGG L++AK++AENN G+RVL+ +E+
Sbjct: 135 EFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGSRVLLTTSET 194
Query: 209 TLIAFYGPEVGCNDTIIGQALFGDGSGAVIVGADPVGAVERPLFEMAFASQATVPDSEGA 268
T++ F P ++G ALFGDG+ A+I+GADP + E P E+ A Q +P ++G
Sbjct: 195 TVLGFRPPNKARPYNLVGAALFGDGAAALIIGADPTES-ESPFMELHCAMQQFLPQTQGV 253
Query: 269 ITMQHKKGGMDYHIGGGVPEMLAGSIERCLADAFGAIGVAA-RWRDLFWAVHPGGRRILD 327
I + + G+ + +G +P+ + ++E G A DLFWAVHPGG IL
Sbjct: 254 IDGRLSEEGITFKLGRDLPQKIEDNVEEFCKKLVAKAGSGALELNDLFWAVHPGGPAILS 313
Query: 328 LIEEALGLDNGAMAASRQVLREYGNMSGTTVIFVLNELRRRFVADGAEGADWGALMAFGP 387
+E L L + SR+ L +YGN+S T+ ++++++R G EG +WG +AFGP
Sbjct: 314 GLETKLKLKPEKLECSRRALMDYGNVSSNTIFYIMDKVRDELEKKGTEGEEWGLGLAFGP 373
Query: 388 GVTVETILLR 397
G+T E L+R
Sbjct: 374 GITFEGFLMR 383
>AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396
Length = 395
Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 220/381 (57%), Gaps = 4/381 (1%)
Query: 18 STHEIRRAQRADGPATVLAIGTANPETCVPQDEYADFYFRVTKSEHLPELKNKLRRICNK 77
S+ RR A G AT+LA+G A P VPQ+ + + R TK + +K KL +C
Sbjct: 13 SSKSTRRVANA-GKATLLALGKAFPSQVVPQENLVEGFLRDTKCDD-AFIKEKLEHLCKT 70
Query: 78 SGIEKRFMFVNDDVMEAHPEFADRHLTSLDARVEIVSKVVPELXXXXXXXXXXEWGRPAT 137
+ ++ R+ + +++ +PE ++ R+EI ++ V E+ EWGRP
Sbjct: 71 TTVKTRYTVLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVE 130
Query: 138 DITHLIFSTYSGVKAPGGDRLLASLLGLRPTVSRTVLSLHGCYGGGRALQLAKELAENNR 197
DITH+++ + S ++ PGGD L++ LGLR V+R +L GCYGG L++AK++AENN
Sbjct: 131 DITHIVYVSSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNP 190
Query: 198 GARVLVACAESTLIAFYGPEVGCNDTIIGQALFGDGSGAVIVGADPVGAVERPLFEMAFA 257
G+RVL+ +E+T++ F P ++G ALFGDG+ AVI+GADP E P E+ +A
Sbjct: 191 GSRVLLTTSETTILGFRPPNKARPYDLVGAALFGDGAAAVIIGADP-RECEAPFMELHYA 249
Query: 258 SQATVPDSEGAITMQHKKGGMDYHIGGGVPEMLAGSIERCLADAFGAIG-VAARWRDLFW 316
Q +P ++ I + + G+++ +G +P+ + +IE G G + + D+FW
Sbjct: 250 VQQFLPGTQNVIEGRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFW 309
Query: 317 AVHPGGRRILDLIEEALGLDNGAMAASRQVLREYGNMSGTTVIFVLNELRRRFVADGAEG 376
AVHPGG IL+ +E L L+ + +SR+ L +YGN+S T+++V+ +R G
Sbjct: 310 AVHPGGPAILNRLETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDAA 369
Query: 377 ADWGALMAFGPGVTVETILLR 397
+WG +AFGPG+T E +L+R
Sbjct: 370 QEWGLGLAFGPGITFEGLLIR 390
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,244,539
Number of extensions: 341582
Number of successful extensions: 784
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 4
Length of query: 405
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 304
Effective length of database: 8,337,553
Effective search space: 2534616112
Effective search space used: 2534616112
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)