BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0485400 Os07g0485400|Os07g0485400
(553 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G17300.1 | chr4:9681558-9684833 FORWARD LENGTH=568 742 0.0
AT5G56680.1 | chr5:22936645-22938841 FORWARD LENGTH=573 449 e-126
AT1G70980.1 | chr1:26762339-26764394 FORWARD LENGTH=572 403 e-112
AT3G07420.1 | chr3:2374179-2376644 REVERSE LENGTH=639 288 4e-78
AT4G26870.1 | chr4:13505381-13507619 FORWARD LENGTH=533 117 2e-26
AT4G31180.1 | chr4:15156696-15159362 FORWARD LENGTH=559 100 2e-21
AT1G68420.1 | chr1:25653893-25654156 FORWARD LENGTH=88 58 1e-08
>AT4G17300.1 | chr4:9681558-9684833 FORWARD LENGTH=568
Length = 567
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/557 (67%), Positives = 417/557 (74%), Gaps = 62/557 (11%)
Query: 25 PFAALPLHPTPARLAATTSRWRRFCXXXXXXXXXXXXXXXXXXXXXSGEAVGEFRRRTRV 84
PF A P + SR R FC G VGEFR++ R+
Sbjct: 45 PFDAFPAN----------SRRRCFCTAVSESLGSGDGNKVESYEKRFGSKVGEFRKKLRI 94
Query: 85 ADVKGGEDEGAAWVGKQLAVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPDTEGYDQ 144
A+VKGG DEG + VG+ L + GWVRT R+Q +VTF+E+NDGSCLSN+QCV+T D EGYDQ
Sbjct: 95 AEVKGGADEGLSRVGQSLNIMGWVRTLRSQSSVTFIEINDGSCLSNLQCVMTSDAEGYDQ 154
Query: 145 IDS--ITTGASVLVEGVIASSQGGKQKVELKVSKISVAVDNIIPGKXXXXXXXXXXXXVQ 202
++S I TGASV V+G I +SQG KQKVELKV KI V
Sbjct: 155 VESGSILTGASVSVQGTIVASQGTKQKVELKVEKIIV----------------------- 191
Query: 203 IGESDPTSFPIQKKRASREFLRTVAHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWV 262
+GE D +S+PIQKKR SREFLRT AHLRPRTNTFGAVARVRN LAYATHKFFQ++GFVWV
Sbjct: 192 VGECD-SSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQESGFVWV 250
Query: 263 ASPIITASDCEGAGEQFYVTTLISNSAEGGSLVKD-IPSTKDGRVDWSQDFFCKPAFLTV 321
ASPIITASDCEGAGEQF VTTLI +S E D IP TK G +DWSQDFF KPAFLTV
Sbjct: 251 ASPIITASDCEGAGEQFCVTTLIPSSHENTDTSIDAIPKTKGGLIDWSQDFFGKPAFLTV 310
Query: 322 SGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFW---------------------- 359
SGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFW
Sbjct: 311 SGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWMIEPELAFADLDDDMACATAYL 370
Query: 360 ---VKYVLENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYSDAIELLVGSKKKFEFP 416
VKYVL+NCKEDM+FF+TWIEKGII RL+DV EK F+ L Y+DAIE+L+ + KKF+FP
Sbjct: 371 QYVVKYVLDNCKEDMEFFDTWIEKGIIRRLSDVAEKEFLQLGYTDAIEILLKANKKFDFP 430
Query: 417 VKWGLDLQSEHERYITEVAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDLLVPRVGE 476
VKWGLDLQSEHERYITE AFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMD+LVPR+GE
Sbjct: 431 VKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEIKAFYMRENDDGKTVAAMDMLVPRIGE 490
Query: 477 LIGGSQREERLDYLEARLDELNLNKDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMD 536
LIGGSQREERL+ LEARLDEL LNK+SYWWYLDLRRYGSVPHAGFGLGFERLVQF TG+D
Sbjct: 491 LIGGSQREERLEVLEARLDELKLNKESYWWYLDLRRYGSVPHAGFGLGFERLVQFVTGID 550
Query: 537 NIRDTIPFPRVPGSAEF 553
NIRD IPFPR P SAEF
Sbjct: 551 NIRDVIPFPRTPASAEF 567
>AT5G56680.1 | chr5:22936645-22938841 FORWARD LENGTH=573
Length = 572
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/572 (44%), Positives = 330/572 (57%), Gaps = 120/572 (20%)
Query: 76 GEFRRRTRVADVKGGEDEGAAWVGKQLAVRGWVRTCRAQ--RTVTFVEVNDGSCLSNMQC 133
+F R + + D GA G+ + + GWV++ R Q RT +F+ VNDGSC +N+Q
Sbjct: 27 AQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVKSGRDQGKRTFSFLAVNDGSCPANLQV 86
Query: 134 VLTPDTEGYDQIDSITTGASVLVEGVIA---SSQGGKQKVELKVSKISVAVDNIIPGKXX 190
++ P YD + + TG V V+GV+ +G +Q++EL V K+
Sbjct: 87 MVDPSL--YDVSNLVATGTCVTVDGVLKVPPKGKGTQQQIELNVVKV------------- 131
Query: 191 XXXXXXXXXXVQIGESDPTSFPIQKKRASREFLRTVAHLRPRTNTFGAVARVRNALAYAT 250
+ +G D + +P+ K + + E LR V HLR RTN+ AVAR+RNALA+AT
Sbjct: 132 ----------IDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFAT 181
Query: 251 HKFFQDNGFVWVASPIITASDCEGAGEQFYVTT-----------LISNSA---------- 289
H FFQ++ F+++ +PIIT SDCEGAGE F TT LI N
Sbjct: 182 HSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAAR 241
Query: 290 ----EGGSLVKDIPSTK------------------------------------DGRVDWS 309
E G++V ++ + K DG +D+S
Sbjct: 242 LIVIERGNVVAELKAAKASKEAITAAVAELKIAKETFAHIDERSRLRPGLPKKDGNIDYS 301
Query: 310 QDFFCKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFW---------- 359
+DFF + AFLTVSGQL ETYA ALS+VYTFGPTFRAENS+TSRHLAEFW
Sbjct: 302 KDFFGRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFAD 361
Query: 360 -----------VKY----VLENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYSDAIE 404
VKY +LE C DM+ + G IDRL V F ++Y+ AIE
Sbjct: 362 LEDDMNCAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAIE 421
Query: 405 LL---VGSKKKFEFPVKWGLDLQSEHERYITEVAFGGRPVIIRDYPKEIKAFYMRENDDG 461
LL V K+F+ V+WG+DL SEHERY+TEV F +P+I+ +YPK IKAFYMR NDD
Sbjct: 422 LLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQ-KPLIVYNYPKGIKAFYMRLNDDE 480
Query: 462 KTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNKDSYWWYLDLRRYGSVPHAGF 521
KTVAAMD+LVP+VGELIGGSQREER D ++ R++E+ L + Y WYLDLRRYG+V H GF
Sbjct: 481 KTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGF 540
Query: 522 GLGFERLVQFATGMDNIRDTIPFPRVPGSAEF 553
GLGFER++ FATG+DNIRD IPFPR PG A+
Sbjct: 541 GLGFERMILFATGLDNIRDVIPFPRYPGKADL 572
>AT1G70980.1 | chr1:26762339-26764394 FORWARD LENGTH=572
Length = 571
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/574 (41%), Positives = 319/574 (55%), Gaps = 125/574 (21%)
Query: 76 GEFRRRTRVADVKGGEDEGAAWVGKQLAVRGWVRTCRAQR--TVTFVEVNDGSCLSNMQC 133
+F R + + GG GA G+++ + GWV+T R Q T F+EVNDGSC +N+Q
Sbjct: 27 AQFSDRVLIRSILGG---GAKLAGQKVRIGGWVKTGRQQGKGTFAFLEVNDGSCPANLQV 83
Query: 134 VLTPDTEGYDQIDSITTGASVLVEGVIA---SSQGGKQKVELKVSKISVAVDNIIPGKXX 190
++ D+ YD + TG V V+GV+ +G KQ +EL V +
Sbjct: 84 MV--DSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELSVETV------------- 128
Query: 191 XXXXXXXXXXVQIGESDPTSFPIQKKRASREFLRTVAHLRPRTNTFGAVARVRNALA--- 247
+ +G DPT++P+ K + + EFLR V HLR RTN AVAR+RNALA
Sbjct: 129 ----------IAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFAT 178
Query: 248 ---YATHKF-------------------FQDNGFV---------WVASPIITASDCEGA- 275
+ H F FQ + + +P T +D E A
Sbjct: 179 HSFFQEHSFLYIHTPIITTSDCEGAGEMFQVTTLINHTERVEQDLIDNPPPTEADVEAAR 238
Query: 276 ------GE---QFYVTTL----ISNSAEGGSLVK--------------DIPSTKDGRVDW 308
GE Q V I+ S S+ K +P DG++D+
Sbjct: 239 LIVKERGEAVAQLKVAKASKEEITASVAQLSVAKASLAHVEERLRLKPGLPKN-DGKIDY 297
Query: 309 SQDFFCKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSRHLAEFWV-------- 360
S DFF + AFLTVSGQL ETYA ALS VYTFGPTFRAENS+TSRHLAEFW+
Sbjct: 298 SNDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA 357
Query: 361 -----------------KYVLENCKEDMDFFNTWIEKGIIDRLNDVVEKNFVHLSYSDAI 403
K++++ C +DM+ + +++G RLN V + +F ++Y++AI
Sbjct: 358 DIHDDMNCAEAYVKYMCKWLMDKCGDDMELMDKNVDEGCTKRLNMVAKASFKRVTYTEAI 417
Query: 404 ELL----VGSKKKFEFPVKWGLDLQSEHERYITEVAFGGRPVIIRDYPKEIKAFYMREND 459
E L K F+ V+WG+DL SEHERY+TEV F +P+I+ +YPK IKAFYMR ND
Sbjct: 418 ERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYPKGIKAFYMRLND 477
Query: 460 DGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNKDSYWWYLDLRRYGSVPHA 519
D KTVAAMD+LVP+VGELIGGSQREER D ++ R++E+ L + Y WYLDLRRYG+V H
Sbjct: 478 DEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWYLDLRRYGTVKHC 537
Query: 520 GFGLGFERLVQFATGMDNIRDTIPFPRVPGSAEF 553
GFGLGFER++QFATG+DNIRD IPFPR PG A+
Sbjct: 538 GFGLGFERMIQFATGIDNIRDVIPFPRYPGKADL 571
>AT3G07420.1 | chr3:2374179-2376644 REVERSE LENGTH=639
Length = 638
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 255/524 (48%), Gaps = 115/524 (21%)
Query: 117 VTFVEVNDGSCLSNMQCVLTPDTEGYDQIDSITTGASVLVEGVI--ASSQGGKQKVELKV 174
V + ++DGS +S++Q V+ + G ++ EGV+ + K +EL+
Sbjct: 139 VFYFLISDGSSISSLQVVVDSALSTVPATQLMALGTCIVAEGVLRLPLAASAKHVIELEA 198
Query: 175 SKISVAVDNIIPGKXXXXXXXXXXXXVQIGESDPTSFPIQKKRASREFLRTVAHLRPRTN 234
K+ + +G DP +P+ KK+ LR +H RPRT
Sbjct: 199 EKL-----------------------LHVGTVDPEKYPLSKKQLPLHMLRDFSHFRPRTT 235
Query: 235 TFGAVARVRNALAYATHKFFQDNGFVWVASPIITASDCEGAGEQFYVTTLI--------- 285
T G+V RV +AL A+H F Q +GF +V P+IT + G GE F VTTL+
Sbjct: 236 TVGSVTRVHSALTLASHTFLQYHGFQYVQVPVITTT--TGFGEMFRVTTLLGKTDDKEEK 293
Query: 286 ---------------------------------SNSAEGGSLVKDIPSTKD--GRVDWSQ 310
SN + V D+ T D +++ Q
Sbjct: 294 KPPVQEKDGFSIDTVKAVIKEKTRLIDHLKRSDSNRETVVAAVHDLKKTNDLASQIEMKQ 353
Query: 311 -----------------DFFCKPAFLTVSGQLNGETYATALSDVYTFGPTFRAENSNTSR 353
DFF + +LT SG+ + E+YA+AL VYTFGP F A+ + +R
Sbjct: 354 KSKTGTLVKPEKLDFSKDFFGRDTYLTASGRFHLESYASALGKVYTFGPRFIADKIDNAR 413
Query: 354 HLAEFW-------------------------VKYVLENCKEDMDFFNTWIEKGIIDRLND 388
HLAE W KYVLEN EDM F + ++K I RL
Sbjct: 414 HLAEKWNVETEMAFAELDDAMDCADEYFKFLCKYVLENRDEDMKFISKRVDKTITTRLEA 473
Query: 389 VVEKNFVHLSYSDAIELLV-GSKKKFEFPVKWGLDLQSEHERYITEVAFGGRPVIIRDYP 447
+ + SY++ I LL + KFE +WG+ L +EH Y+T+ + G PVI+ YP
Sbjct: 474 TASSSLLRFSYTEVISLLQKATTTKFETKPEWGVALTTEHLSYLTDEIYKG-PVIVHTYP 532
Query: 448 KEIKAFYMRENDDGKTVAAMDLLVPRVGELIGGSQREERLDYLEARLDELNLNKDSYWWY 507
K IK FY+R NDD KTVAA DL+VP+VG +I GSQ EER + L+AR+ E ++ + WY
Sbjct: 533 KAIKQFYVRLNDDKKTVAAFDLVVPKVGVVITGSQNEERFEILDARIGESGFTREKFEWY 592
Query: 508 LDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVPGSA 551
LDLRR+G+V H+G L E+++ +ATG+ +I+D IPFPR G A
Sbjct: 593 LDLRRHGTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRSWGKA 636
>AT4G26870.1 | chr4:13505381-13507619 FORWARD LENGTH=533
Length = 532
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 210/485 (43%), Gaps = 79/485 (16%)
Query: 98 VGKQLAVRGWVRTCRAQRTVTFVEVNDGSCLSNMQCVLTPDTEGYDQID---SITTGASV 154
VG ++++RG + R T FV + + +QCV+ G + I ++ + V
Sbjct: 84 VGSEVSIRGRLHKNRLVGTKLFVILRESGF--TVQCVVEETRVGANMIKFVKQLSRESVV 141
Query: 155 LVEGVIASSQ----GGKQKVELKVSKISVAVDNIIPGKXXXXXXXXXXXXVQIGESDPTS 210
+ GV++ + G Q+VE+ V K+ + +P ESD
Sbjct: 142 ELIGVVSHPKKPLTGTTQQVEIHVRKM-YCLSRSLPNLPLVVEDAAR------SESDIEK 194
Query: 211 FPIQKKRASREFLRTVAH---LRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPII 267
K+A+R T + L RT A+ R++ + A ++ Q GF+ + +P
Sbjct: 195 SGKDGKQAARVLQDTRLNNRVLDIRTPANQAIFRIQCQVQIAFREYLQSKGFLEIHTP-- 252
Query: 268 TASDCEGAGEQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNG 327
LI+ S+EGGS V + D+ +PA L S QL+
Sbjct: 253 ---------------KLIAGSSEGGSAV------------FRLDYKGQPACLAQSPQLHK 285
Query: 328 ETYATA-LSDVYTFGPTFRAENSNTSRHLAEF-----------WVKYVLENCKEDMDFFN 375
+ + V+ GP FRAE+S T RHL EF +++ E F
Sbjct: 286 QMAICGDMRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRMHYSEIMDLVGELFPFIF 345
Query: 376 TWIEKGIIDRLNDVVEK----------NFVHLSYSDAIELLVGSKKKFEFPVKWGLDLQS 425
T IE+ L V ++ + L++++ I++L + ++ + P+ DL +
Sbjct: 346 TKIEERCPKELESVRKQYPFQSLKFLPQTLRLTFAEGIQMLKEAGEEVD-PLG---DLNT 401
Query: 426 EHERYITEVA---FGGRPVIIRDYPKEIKAFY-MRENDDGKTVAAMDLLVPRVGELIGGS 481
E ER + ++ + ++ YP ++ FY M +D + D+ + R E++ G+
Sbjct: 402 ESERKLGQLVLEKYKTEFYMLHRYPSAVRPFYTMPYENDSNYSNSFDVFI-RGEEIMSGA 460
Query: 482 QREERLDYLEARLDELNLNKDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDT 541
QR + LE R E ++ + Y+D RYG+ PH GFG+G ER+V ++NIR T
Sbjct: 461 QRIHDPELLEKRARECGIDVKTISTYIDAFRYGAPPHGGFGVGLERVVMLLCALNNIRKT 520
Query: 542 IPFPR 546
FPR
Sbjct: 521 SLFPR 525
>AT4G31180.1 | chr4:15156696-15159362 FORWARD LENGTH=559
Length = 558
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 198/482 (41%), Gaps = 71/482 (14%)
Query: 101 QLAVRGWVRTCR-AQRTVTFVEVNDGSCLSNMQCVLTPDTE---GYDQID---SITTGAS 153
++ +RG V T R + FV + + S +QCV++ + G + + ++ +
Sbjct: 109 EVLIRGRVHTNRPTSNKLGFVVLRESG--STVQCVVSQSEKTKVGANMVKYLKQLSRESF 166
Query: 154 VLVEGVIASSQ----GGKQKVELKVSKISVAVDNIIPGKXXXXXXXXXXXXVQIGESDPT 209
V V GV+ + G Q+VE++V K+ ++ K I S T
Sbjct: 167 VDVIGVVTLPKEPLTGTTQQVEIQVRKVYCINKSL--AKLPLSVEDAARSEADIEASLQT 224
Query: 210 SFPIQKKRASREFLRTVAHLRPRTNTFGAVARVRNALAYATHKFFQDNGFVWVASPIITA 269
P + V LR N A+ +++ + YA + + FV + +P
Sbjct: 225 PSPAARVNQDTRLNYRVLDLRTPANQ--AIFQLQYEVEYAFREKLRFKNFVGIHTP---- 278
Query: 270 SDCEGAGEQFYVTTLISNSAEGGSLVKDIPSTKDGRVDWSQDFFCKPAFLTVSGQLNGET 329
L++ S+EGGS V + ++ +PA L S QL+ +
Sbjct: 279 -------------KLMAGSSEGGSAV------------FRLEYKGQPACLAQSPQLHKQM 313
Query: 330 YATA-LSDVYTFGPTFRAENSNTSRHLAEFW----VKYVLENCKEDMDFFNTWIEKGIID 384
L V+ GP FRAE+S T RHL EF + ++ E MD + I
Sbjct: 314 AICGDLRRVFEVGPVFRAEDSFTHRHLCEFVGLDVEMEIRKHYSEIMDLVDELF-VFIFT 372
Query: 385 RLNDVVEKNFVHLSYSDAIELLVGSKKKFEFPVKWGL--------------DLQSEHERY 430
LN+ +K + E L K + G+ DL +E ER
Sbjct: 373 SLNERCKKELQAVGKQYPFEPLKFLPKTLRLTFEEGVQMLKEAGVEVDPLGDLNTESERK 432
Query: 431 ITEVA---FGGRPVIIRDYPKEIKAFY-MRENDDGKTVAAMDLLVPRVGELIGGSQREER 486
+ ++ + I+ YPK ++ FY M D+ + D+ + R E+I G+QR
Sbjct: 433 LGQLVLEKYNTEFYILHRYPKAVRPFYTMTCADNPLYSNSFDVFI-RGEEIISGAQRVHI 491
Query: 487 LDYLEARLDELNLNKDSYWWYLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPR 546
+ LE R E ++ + Y+D RYG+ H GFG+G ER+V ++NIR T FPR
Sbjct: 492 PEVLEQRAGECGIDVKTISTYIDSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPR 551
Query: 547 VP 548
P
Sbjct: 552 DP 553
>AT1G68420.1 | chr1:25653893-25654156 FORWARD LENGTH=88
Length = 87
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 25/77 (32%)
Query: 334 LSDVYTFGPTFRAENSNTSRHLAEFWVKYV-------------------------LENCK 368
+ DVYTF PTFRAE S+TSRHLAEFW+ V LE C+
Sbjct: 1 MGDVYTFAPTFRAEKSHTSRHLAEFWMVEVELAFAGVEEAMNCSEAVVKDMCTTLLEKCR 60
Query: 369 EDMDFFNTWIEKGIIDR 385
+DM++ +++ IDR
Sbjct: 61 DDMEYMVEKVDEFCIDR 77
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,178,732
Number of extensions: 463256
Number of successful extensions: 1032
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1011
Number of HSP's successfully gapped: 10
Length of query: 553
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 449
Effective length of database: 8,255,305
Effective search space: 3706631945
Effective search space used: 3706631945
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)