BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0484300 Os07g0484300|AK072721
(570 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25230.1 | chr4:12924446-12928671 FORWARD LENGTH=579 467 e-132
AT5G51450.2 | chr5:20893164-20897223 FORWARD LENGTH=596 426 e-119
AT1G65040.2 | chr1:24160105-24163365 REVERSE LENGTH=461 99 4e-21
AT3G16090.1 | chr3:5456513-5458694 FORWARD LENGTH=493 99 8e-21
AT2G04240.1 | chr2:1461816-1462304 REVERSE LENGTH=163 53 6e-07
>AT4G25230.1 | chr4:12924446-12928671 FORWARD LENGTH=579
Length = 578
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/529 (46%), Positives = 318/529 (60%), Gaps = 19/529 (3%)
Query: 54 SHVTVALLANLAAHVFLVLILSLKTLFFVQLTSSETRKVLEHIINYVLYKGTFLPLVVPP 113
S+ T+ALL N +V+++L+LSLKTLFF L ET+K++E + NY++YKGTFLPLV+PP
Sbjct: 56 SYFTIALLTNFVLNVYILLVLSLKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPP 115
Query: 114 NSQQIIXXXXXXXXXXXXKMFQSLARERLEQLNASPSATPSKYFRVYXXXXXXXXXXXXW 173
Q + KMFQ+LAR+RLE+LNASPS+TP YFRVY W
Sbjct: 116 TIFQGVLWTVWLTVLCTLKMFQALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMFW 175
Query: 174 IKLCVGFCKSCNSQLFWLMFFEPLSIGFETLQSIMVHGFQLFDIWQRHQMDSGVDYLDFQ 233
IKL + + S ++ L+ FEP SI FETLQ++++HGFQL D+W H D +
Sbjct: 176 IKLSLMTYNTIGSAVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 234 KTYKQAAGSFSEWRGRLVRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLR 293
AGS EW+G L RN GF +D+ +L+M+LGHY I+WL G+AFHLVDAVL LN+R
Sbjct: 236 FIDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIR 295
Query: 294 ALIASFWKRIKTYAKLRKALSSLDGALPDATYDEICAYDDECAICRGPMARAKKLSCNHL 353
AL+++ KRIK Y KLR AL +L ALPDAT +E+ AYDDECAICR PMA+AK+L CNHL
Sbjct: 296 ALLSAILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHL 355
Query: 354 FHLACLRSWLDQGLMDGYSCPTCRRPLFLSSQGHTRSTAEVGNVQLIA-EQLNAGLNQQR 412
FHL CLRSWLDQGL + YSCPTCR+PLF+ G T + V++ + EQL L +Q
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFV---GRTENEVNPRTVEVSSDEQLARQLERQN 412
Query: 413 VPGH---------EHPIEHQNPADAVWRGAGLDSSWAPPWXXXXXXXXXXXXXXXXXXXX 463
P H E P +N R GLD SW W
Sbjct: 413 NPVHALATGLFPAEVPDSVENDTS---RNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLG 469
Query: 464 XXQMMMRQLTSVTDNYGHP---DATWSLWPEPVAGXXXXXXXXXRPDGASAAGLRFRGTA 520
QMMMR L SV ++Y DA WSLWP + +G GL R +
Sbjct: 470 RVQMMMRHLASVGESYAQTALDDAAWSLWPMNPSQASTSSTTVPPGNGGRTGGLHLRTVS 529
Query: 521 RPANGSMSEVLSMVDRVREVLPHIPDELIIEDLMRTNNINATVNNLLLM 569
N S++ +L+M + VREV+PH+PDE+I +DL RTN++ TVNNLL M
Sbjct: 530 NTTNESLTNILAMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM 578
>AT5G51450.2 | chr5:20893164-20897223 FORWARD LENGTH=596
Length = 595
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/544 (44%), Positives = 315/544 (57%), Gaps = 32/544 (5%)
Query: 54 SHVTVALLANLAAHVFLVLILSLKTLFFVQLTSSETRKVLEHIINYVLYKGTFLPLVVPP 113
SH T+ALLA+ +++++L+LSLKTLFF L + ETRK++E + NY++YKGTFLP VVP
Sbjct: 56 SHTTIALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPR 115
Query: 114 NSQQIIXXXXXXXXXXXXKMFQSLARERLEQLNASPSATPSKYFRVYXXXXXXXXXXXXW 173
Q + KMFQ+LAR+RL++LNASPS+TP YFRVY W
Sbjct: 116 TVFQGVLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCW 175
Query: 174 IKLCVGFCKSCNSQLFWLMFFEPLSIGFETLQSIMVHGFQLFDIWQRHQMDSGVDYLDFQ 233
IKL + + S ++ L+ FEP I FETLQ++++HGFQL D+W H D +
Sbjct: 176 IKLSLMIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSK 235
Query: 234 KTYKQAAGSFSEWRGRLVRNFGFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLR 293
AGS EW+G L RN GF +D+ +L+M+LGHY I+WL GMAFHLVDAVL LN+R
Sbjct: 236 FYDSMTAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIR 295
Query: 294 ALIASFWKRIKTYAKLRKALSSLDGALPDATYDEICAYDDECAICRGPMARAKKLSCNHL 353
AL++S KRIK Y KLR AL +L AL DAT +E+ YDDECAICR PMA+AK+L CNHL
Sbjct: 296 ALLSSILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHL 355
Query: 354 FHLACLRSWLDQGLMDGYSCPTCRRPLFLSSQGHTRSTA-----EVGNVQLIAEQLNAGL 408
FHL CLRSWLDQGL + YSCPTCR+PLF+ G T S A EV + + +A Q
Sbjct: 356 FHLGCLRSWLDQGLNEVYSCPTCRKPLFV---GRTESEANPSRGEVSSDEHLARQFERQN 412
Query: 409 NQ-QRVPGHEHPIEHQNPADA-------------------VWRGAGLDSSWAPPWXXXXX 448
N + P E N ++ +R + +D SW W
Sbjct: 413 NSVHALTTGMFPTETPNFTESDPWRLAFLNGISSSHLFLMPYRNSEVDPSWLQTWSDQGV 472
Query: 449 XXXXXXXXXXXXXXXXXQMMMRQLTSVTDNYGHP---DATWSLWPEPVAGXXXXXXXXXR 505
Q+MMR L SV + DA+W LWP +
Sbjct: 473 DVVGSSAGSRSVGLGQVQLMMRHLASVGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPP 532
Query: 506 PDGASAAGLRFRGTARPANGSMSEVLSMVDRVREVLPHIPDELIIEDLMRTNNINATVNN 565
G GL R +R AN +M+ +L+M + VREVLPH+PDE+I +DL RTN+++ TVNN
Sbjct: 533 GAGGRTGGLHLRTVSRAAN-NMASILAMAETVREVLPHVPDEIIFQDLQRTNSVSVTVNN 591
Query: 566 LLLM 569
LL M
Sbjct: 592 LLQM 595
>AT1G65040.2 | chr1:24160105-24163365 REVERSE LENGTH=461
Length = 460
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 137 LARERLEQLNASPSATPSKYFRVYXXXXXXXXXXXXWIKLCVG-FCKSCNSQLFWLMFFE 195
+A++R+E + +PS T + R+ + +S + + FE
Sbjct: 119 MAQKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSVFFTFE 178
Query: 196 PLSIGFETLQSIMVHGFQLFDIWQRHQMDSGVDYLDFQKTYKQAAGSFSEWRGRLVRNF- 254
+ + T+ I+ + F + D+ + Q W G+ V F
Sbjct: 179 YMILATTTVSIIVKYAFYVTDMLKEGQ-----------------------WEGKPVYTFY 215
Query: 255 -GFVIDLISLLMSLGHYSMIFWLRGMAFHLVDAVLLLNLRALIASFWKRIKTYAKLRKAL 313
V DL+ L M L + MIF G+ HL+ L +F R+ Y + RK
Sbjct: 216 LELVRDLLHLSMYLCFFLMIFMNYGLPLHLIR-----ELYETFRNFKIRVTDYLRYRKIT 270
Query: 314 SSLDGALPDATYDEICAYDDECAICRGPMARAKKLSCNHLFHLACLRSWLDQGLMDGYSC 373
S+++ PDAT +E+ + D C ICR M AKKL C HLFH+ CLRSWL++ +C
Sbjct: 271 SNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLER----QNTC 326
Query: 374 PTCR 377
PTCR
Sbjct: 327 PTCR 330
>AT3G16090.1 | chr3:5456513-5458694 FORWARD LENGTH=493
Length = 492
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 146/343 (42%), Gaps = 70/343 (20%)
Query: 54 SHVTVALLANLAAHVFLVLILSL----KTLFFVQLTSSET--------RKVLEHIINYVL 101
S +++ LL N+ LVL+LSL K +F L +E R+++E + +
Sbjct: 39 SKISLVLLLNMC----LVLMLSLWHLVKFVFLGSLREAEVERLNEQAWRELMEILFAITI 94
Query: 102 YK----GTFLPLVVPPNSQQIIXXXXXXXXXXXXKMFQSLARERLEQLNASPSATPSKYF 157
++ FLPLVV K LA++R+E + +PS + +F
Sbjct: 95 FRQDFSSGFLPLVV---------------TLLLIKALHWLAQKRVEYIETTPSVSKLSHF 139
Query: 158 RVYXXXXXXXXXXXXWIKLCV-GFCKSCNSQLFWLMFFEPLSIGFETLQSIMVHGFQLFD 216
R+ ++ + +S + + FE + + T+ + + F + D
Sbjct: 140 RIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSFEYMILATTTVAIFVKYVFYVTD 199
Query: 217 IWQRHQMDSGVDYLDFQKTYKQAAGSFSEWRGRLVRNF--GFVIDLISLLMSLGHYSMIF 274
+ MD +W + V F + DL+ L M + + +IF
Sbjct: 200 ML----MDG-------------------QWEKKPVYTFYLELIRDLLHLSMYICFFFVIF 236
Query: 275 WLRGMAFHLVDAVLLLNLRALIASFWKRIKTYAKLRKALSSLDGALPDATYDEICAYDDE 334
G+ HL L L +F R+ Y + RK S+++ PDAT +E+ A D
Sbjct: 237 MNYGVPLHL-----LRELYETFRNFQIRVSDYLRYRKITSNMNDRFPDATPEELTASDAT 291
Query: 335 CAICRGPMARAKKLSCNHLFHLACLRSWLDQGLMDGYSCPTCR 377
C ICR M AKKL C HLFH+ CLRSWL++ +CPTCR
Sbjct: 292 CIICREEMTNAKKLICGHLFHVHCLRSWLER----QQTCPTCR 330
>AT2G04240.1 | chr2:1461816-1462304 REVERSE LENGTH=163
Length = 162
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 321 PDATYDEIC----AYDDECAICRGPM---ARAKKLSCNHLFHLACLRSWLDQGLMDGYSC 373
P ++ +C D+EC++C + KL C HLFH CL W+D +C
Sbjct: 85 PTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYW---NITC 141
Query: 374 PTCRRPLFLSSQGHTRST 391
P CR PL + + H S+
Sbjct: 142 PLCRTPLVVVPEDHQLSS 159
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.137 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,021,676
Number of extensions: 355924
Number of successful extensions: 1412
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 1480
Number of HSP's successfully gapped: 6
Length of query: 570
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 466
Effective length of database: 8,255,305
Effective search space: 3846972130
Effective search space used: 3846972130
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 114 (48.5 bits)