BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0472300 Os07g0472300|AK070792
         (670 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17910.1  | chr5:5927906-5932292 FORWARD LENGTH=1343           130   2e-30
AT1G07330.1  | chr1:2251131-2253585 FORWARD LENGTH=686             70   5e-12
AT2G29620.1  | chr2:12663200-12665803 REVERSE LENGTH=748           65   2e-10

>AT5G17910.1 | chr5:5927906-5932292 FORWARD LENGTH=1343
          Length = 1342

 Score =  130 bits (328), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 104/183 (56%), Gaps = 25/183 (13%)

Query: 190 VVAWTADDQKNILNIGCLEIERNQRLENLIARRRARKYI----DRNLIDFGSSDSLPKIE 245
            + WT  DQ+N++++G LE+ERNQRLENLIARRRAR  +    +RNLIDF S+D +P   
Sbjct: 354 AIKWTEADQRNVMDLGSLELERNQRLENLIARRRARHNMRLMAERNLIDFDSAD-IP--- 409

Query: 246 ELSKFNVQIPAIFAPRKNPFDLPYNEDN---FPESAPSAPLNMLSKFDLPFDEANESSST 302
               FN  +P I   R NPFD+ Y+  +    P SAPS      + FDLP++   E    
Sbjct: 410 ----FN--MPPISTARHNPFDVSYDSYDDMPIPGSAPSIMFARRNPFDLPYEPNEEKPDL 463

Query: 303 GGANSNHVDSTTVFSQSQKDTMFRRHESFTPGASFLSDFWQDTQPSRFRPYFVTEKMANE 362
            G       S    SQ  KD MFRRHESF+ G S L     D    R RP+FV E++ANE
Sbjct: 464 KGDGFQEEFS----SQQPKDPMFRRHESFSVGPSMLGGPRHD----RLRPFFVLERLANE 515

Query: 363 GIS 365
           G S
Sbjct: 516 GTS 518



>AT1G07330.1 | chr1:2251131-2253585 FORWARD LENGTH=686
          Length = 685

 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 29/183 (15%)

Query: 189 KVVAWTADDQKNILNIGCLEIERNQRLENLIARRRARKYIDRNLIDFGSSDSLPKIEELS 248
           K+VAWT DDQKN++++G  E+ERN+RLE+LI RRR R+              +    E S
Sbjct: 157 KIVAWTEDDQKNLMDLGNSEMERNKRLEHLITRRRMRR-------------LVRLAAESS 203

Query: 249 KFNVQIPAIFAPRKNPFDLPYNEDNF-------PESAPSAPLNMLSKFDLPFDEANESSS 301
             ++++P +   R N F L  +++N+       PESAPS  L   + FD+P+D   E  +
Sbjct: 204 LMDMEVPPVCVGR-NYFGL--DQENYIVDGLQMPESAPSVLLPTKNPFDIPYDPQEEKPN 260

Query: 302 TGGANSNHVDSTTVFSQSQKDTMFRRHESFTPGASFLSDFWQDTQPSRFRPYFVTEKMAN 361
             G +         F+ +  D  F RHESF     F  D   DT+   ++   + ++ +N
Sbjct: 261 LSGDSFQQ-----EFAANPNDIFFCRHESFCRRV-FPLDNQLDTKWEPWKKKSIPQQGSN 314

Query: 362 EGI 364
           +G+
Sbjct: 315 DGL 317



>AT2G29620.1 | chr2:12663200-12665803 REVERSE LENGTH=748
          Length = 747

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 78/190 (41%), Gaps = 58/190 (30%)

Query: 190 VVAWTADDQKNILNIGCLEIERNQRLENLIARRRA-------------------RKYIDR 230
           VVAWT DDQKN++++G  EIERN+RLENLI+RRR+                   R  I R
Sbjct: 224 VVAWTEDDQKNLMDLGTSEIERNKRLENLISRRRSRRFFLLAAEGSLMDDMEVPRICIGR 283

Query: 231 NLIDFGSSDSLPKIEELSKFNVQIPAIFAPRKNPFDLPYNEDNFPESAPSAPLNMLSKFD 290
           N   F   +   +I+ L       P++  PR+NPFDLPY+           P      F 
Sbjct: 284 NFYGFDKGNY--EIDGLV-MPGSAPSVLLPRRNPFDLPYD------PLEEKPNLTGDSFQ 334

Query: 291 LPFDEANESSSTGGANSNHVDSTTVFSQSQKDTMFRRHESFTPGA--------SFLSDFW 342
             F E N                       KD  F RHESF   A        S  +  W
Sbjct: 335 QEFAETN----------------------PKDIFFCRHESFHHRAFPSESQNDSKFTSLW 372

Query: 343 QDTQPSRFRP 352
           ++    R RP
Sbjct: 373 RNVVDGRPRP 382



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.310    0.129    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,519,493
Number of extensions: 564000
Number of successful extensions: 1834
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1822
Number of HSP's successfully gapped: 4
Length of query: 670
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 565
Effective length of database: 8,227,889
Effective search space: 4648757285
Effective search space used: 4648757285
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 115 (48.9 bits)