BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0457300 Os07g0457300|AK073856
         (637 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01770.1  | chr1:278759-282490 FORWARD LENGTH=633              790   0.0  

>AT1G01770.1 | chr1:278759-282490 FORWARD LENGTH=633
          Length = 632

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/642 (62%), Positives = 477/642 (74%), Gaps = 26/642 (4%)

Query: 2   EELHDCVVQLRSNPQRCRDTVYVGCGAGFGGDRPMAALKLLERVKELNYLVLECLAERTL 61
           E L DCV+ LR NP+R R+TVYVGCGAGFGGDRP+AALKLL+RV+ELNYLVLECLAERTL
Sbjct: 8   EILCDCVINLRENPKRRRETVYVGCGAGFGGDRPLAALKLLQRVEELNYLVLECLAERTL 67

Query: 62  VDRYQIMMSGGKGYDPRVKEWLSVLLPLALDRGVCIITNMGAVDPLGAQEEVLELASNLG 121
            DR+  M SGG GYDPRV EW+ +LLPLA++RG CIITNMGA+DP GAQ++VLE+A  LG
Sbjct: 68  ADRWLSMASGGLGYDPRVSEWMQLLLPLAVERGTCIITNMGAIDPSGAQKKVLEVAGELG 127

Query: 122 LEITVAVA----YETSSGNSVFSNESTGVRQGGSTYLGVASIVHCLENGKPQVVITSRVA 177
           L I+VAVA    +ET SG+S      +    G STYLG A IV CLE  +P V+ITSRVA
Sbjct: 128 LTISVAVAHEVHFETGSGSSFGGQYCSA--GGTSTYLGAAPIVECLEKYQPNVIITSRVA 185

Query: 178 DAALFLAPMVYELGWNWNDFEELSQGTLASHLLECGCQLTGGYFMHPGDAYRDFSFEQLL 237
           DAALFLAPMVYELGWNWND E L+QGTLA HLLECGCQLTGGYFMHPGD YRD +F  L 
Sbjct: 186 DAALFLAPMVYELGWNWNDLELLAQGTLAGHLLECGCQLTGGYFMHPGDQYRDMAFPLLQ 245

Query: 238 DLSLPYAEVSYKGEVFVGKAEGSGGLLSYSTCAEQLLYEVGDPANYITPDLVVDFRDVKF 297
           DLSLPYAE+ Y G+V V K EGSGG+L+ STCAEQLLYE+ DP+ YITPD+V+D R V F
Sbjct: 246 DLSLPYAEIGYDGKVCVSKVEGSGGILNTSTCAEQLLYEIADPSAYITPDVVIDIRGVSF 305

Query: 298 QQISKDKVQCKGAKP-SNPCWPEKLLQLLPTESGWKGWGEISYGGQECLKRAHAAEYLVR 356
             +S  KVQC GAKP SN   PEKLL+L+P E GWKGWGEISYGG   ++RA A+E+LVR
Sbjct: 306 LPLSDCKVQCSGAKPSSNTSVPEKLLRLIPKECGWKGWGEISYGGNGSIQRAKASEFLVR 365

Query: 357 SWMDETYPGIEGKIISYIIGYDSLKAIGDNKDSSVKQVMDVRFRMDGLFELEEHAIKFVE 416
           SWM+ET PG+   I+SY+IG DSLKA   N   S +   D+R RMDGLF+L+EHA++  +
Sbjct: 366 SWMEETIPGVNHCILSYVIGVDSLKAT-SNGTESWQSCGDIRLRMDGLFKLKEHAVQLTK 424

Query: 417 EFIALYTNGPAGGGGISTGQKKEITLQKILVDREKIFWQVNMKKSSIPSPQNQATNADKG 476
           EF ALYTNGPAGGGGISTG K EI L+K LV RE + W+  ++ ++   P+    ++   
Sbjct: 425 EFTALYTNGPAGGGGISTGHKMEIVLEKRLVSRESVMWKTGLQHTNTSEPETSEHHS--- 481

Query: 477 QMCDQQQHKCPRRCAMGTLPLNTNMDTLPSAV---PSPSGTKIPLYHVAHSRAGDKGNDL 533
               ++  K P+       P N  M    S     P+PSG KIPLY VAHSRAGDKGND+
Sbjct: 482 ---PEKMPKLPKEN-----PKNLTMRGYQSGFHHSPAPSGQKIPLYSVAHSRAGDKGNDI 533

Query: 534 NFSIIPHFPDDIGRLRAVITRDWVKNAVSPLLDSSLFPADRANQVRYDPLENVSIEIYDV 593
           NFSIIPH+  D+ RL+ +IT  WVK+ +S LL +S F    A  +     ENVS+EIYDV
Sbjct: 534 NFSIIPHYSPDVERLKLIITPQWVKHVMSVLLSTSSFLELDAKPMD----ENVSVEIYDV 589

Query: 594 PGISSLNVVVRNILDGGVNSSRRIDRHGKTLSDLILCQNVVL 635
            GI ++NVVVRNILDGGVN SRRIDRHGKT+SDLILCQ VVL
Sbjct: 590 EGIHAMNVVVRNILDGGVNCSRRIDRHGKTISDLILCQQVVL 631



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.137    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,797,381
Number of extensions: 668161
Number of successful extensions: 1413
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1409
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 532
Effective length of database: 8,227,889
Effective search space: 4377236948
Effective search space used: 4377236948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)