BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0448400 Os07g0448400|AK107700
(71 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39010.1 | chr2:16291564-16293746 FORWARD LENGTH=290 121 6e-29
AT4G35100.1 | chr4:16708672-16709958 FORWARD LENGTH=281 120 2e-28
AT3G53420.1 | chr3:19803906-19805454 REVERSE LENGTH=288 118 6e-28
AT2G37170.1 | chr2:15613624-15614791 REVERSE LENGTH=286 118 7e-28
AT2G37180.1 | chr2:15617779-15618937 FORWARD LENGTH=286 115 4e-27
AT5G60660.1 | chr5:24375673-24376939 REVERSE LENGTH=292 114 9e-27
AT2G16850.1 | chr2:7301647-7303180 FORWARD LENGTH=279 113 2e-26
AT3G54820.1 | chr3:20302117-20303738 FORWARD LENGTH=287 111 8e-26
AT4G23400.1 | chr4:12220792-12222155 FORWARD LENGTH=288 109 4e-25
AT1G01620.1 | chr1:225986-227176 REVERSE LENGTH=287 108 7e-25
AT4G00430.1 | chr4:186143-187531 REVERSE LENGTH=288 108 8e-25
AT3G61430.1 | chr3:22733657-22735113 FORWARD LENGTH=287 103 2e-23
AT2G45960.3 | chr2:18910450-18911744 FORWARD LENGTH=302 61 1e-10
AT1G73190.1 | chr1:27522155-27523171 FORWARD LENGTH=269 52 5e-08
AT1G17810.1 | chr1:6130209-6131442 FORWARD LENGTH=268 51 1e-07
AT4G01470.1 | chr4:625092-625850 REVERSE LENGTH=253 50 2e-07
AT2G25810.1 | chr2:11012658-11013906 FORWARD LENGTH=250 50 2e-07
AT4G17340.1 | chr4:9699318-9700250 FORWARD LENGTH=251 48 1e-06
AT5G47450.1 | chr5:19248509-19249466 REVERSE LENGTH=251 47 2e-06
AT3G16240.1 | chr3:5505534-5506788 FORWARD LENGTH=251 47 3e-06
>AT2G39010.1 | chr2:16291564-16293746 FORWARD LENGTH=290
Length = 289
Score = 121 bits (304), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YNN KAW DQWIFWVGPF+GAAIAA YHQ VLRA
Sbjct: 213 MVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAG 272
Query: 61 A-RGYGSFRSN 70
A + YGS RS
Sbjct: 273 AMKAYGSVRSQ 283
>AT4G35100.1 | chr4:16708672-16709958 FORWARD LENGTH=281
Length = 280
Score = 120 bits (300), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YNN KAW DQWIFWVGPF+GA AA YHQ +LRAS
Sbjct: 207 MVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRAS 266
Query: 61 A-RGYGSFRSNA 71
A + GSFRSNA
Sbjct: 267 AIKALGSFRSNA 278
>AT3G53420.1 | chr3:19803906-19805454 REVERSE LENGTH=288
Length = 287
Score = 118 bits (295), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YN SK W D WIFWVGPFIGAAIAA YHQ VLRAS
Sbjct: 214 MVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRAS 273
Query: 61 -ARGYGSFRSNA 71
++ GSFRS A
Sbjct: 274 GSKSLGSFRSAA 285
>AT2G37170.1 | chr2:15613624-15614791 REVERSE LENGTH=286
Length = 285
Score = 118 bits (295), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YN SK W D WIFWVGPFIGAAIAA YHQ VLRAS
Sbjct: 212 MVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRAS 271
Query: 61 -ARGYGSFRSNA 71
++ GSFRS A
Sbjct: 272 GSKSLGSFRSAA 283
>AT2G37180.1 | chr2:15617779-15618937 FORWARD LENGTH=286
Length = 285
Score = 115 bits (289), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV++N SK W D WIFWVGPFIGA IAA YHQ VLRAS
Sbjct: 212 MVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRAS 271
Query: 61 -ARGYGSFRSNA 71
++ GSFRS A
Sbjct: 272 GSKSLGSFRSAA 283
>AT5G60660.1 | chr5:24375673-24376939 REVERSE LENGTH=292
Length = 291
Score = 114 bits (285), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 61/78 (78%), Gaps = 7/78 (8%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YNN KAW DQWIFWVGP IGAA AA YHQ +LRA+
Sbjct: 214 MVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAA 273
Query: 61 A-------RGYGSFRSNA 71
A +GSFRS A
Sbjct: 274 AIKALGSFGSFGSFRSFA 291
>AT2G16850.1 | chr2:7301647-7303180 FORWARD LENGTH=279
Length = 278
Score = 113 bits (282), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
MVHLATIP+TGTGINPARS GAAV+YNN KAW D WIFWVGPF+GA AA YHQ +LRA+
Sbjct: 205 MVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAA 264
Query: 61 A-RGYGSFRSN 70
A + SFRSN
Sbjct: 265 AIKALASFRSN 275
>AT3G54820.1 | chr3:20302117-20303738 FORWARD LENGTH=287
Length = 286
Score = 111 bits (277), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
+VHLATIP+TGTGINPARSLGAA++YN KAW WIFWVGPF GAAIAA YHQ VLRA
Sbjct: 213 IVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAG 272
Query: 61 A-RGYGSFRSN 70
A + GSFRS
Sbjct: 273 AIKALGSFRSQ 283
>AT4G23400.1 | chr4:12220792-12222155 FORWARD LENGTH=288
Length = 287
Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 54/59 (91%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 59
+VHLATIP+TGTGINPARSLGAA++YN AW D WIFWVGPFIGAA+AALYHQIV+RA
Sbjct: 222 LVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRA 280
>AT1G01620.1 | chr1:225986-227176 REVERSE LENGTH=287
Length = 286
Score = 108 bits (269), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 54/59 (91%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 59
+VHLATIP+TGTGINPARSLGAA++YN AW D WIFWVGPFIGAA+AALYHQ+V+RA
Sbjct: 221 LVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRA 279
>AT4G00430.1 | chr4:186143-187531 REVERSE LENGTH=288
Length = 287
Score = 108 bits (269), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 54/59 (91%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 59
+VHLATIP+TGTGINPARSLGAA++YN +W D WIFWVGPFIGAA+AALYHQIV+RA
Sbjct: 222 LVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRA 280
>AT3G61430.1 | chr3:22733657-22735113 FORWARD LENGTH=287
Length = 286
Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 53/59 (89%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 59
+VHLATIP+TGTGINPARSLGAA++YN +W D W+FWVGPFIGAA+AALYH +V+RA
Sbjct: 221 LVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRA 279
>AT2G45960.3 | chr2:18910450-18911744 FORWARD LENGTH=302
Length = 301
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%)
Query: 1 MVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVG 41
+VHLATIP+TGTGINPARSLGAA+++N AW D + +G
Sbjct: 221 LVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHVMGLLG 261
>AT1G73190.1 | chr1:27522155-27523171 FORWARD LENGTH=269
Length = 268
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 8 PVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 54
P +G +NPAR+ G A+V W D WI+WVGPFIG+A+AAL ++
Sbjct: 200 PFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIGSALAALIYE 243
>AT1G17810.1 | chr1:6130209-6131442 FORWARD LENGTH=268
Length = 267
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 8 PVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
P G +NPAR+ G A+V WS+ WI+WVGPFIG A+AAL ++ ++ S
Sbjct: 200 PFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMIIPS 249
>AT4G01470.1 | chr4:625092-625850 REVERSE LENGTH=253
Length = 252
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 11 GTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASARGYGSFRSN 70
G +NPA S G AVV S W++ W++WVGPFIGAAIAA+ + + S G+ SN
Sbjct: 195 GASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTIFIGS-NGHEPLPSN 250
>AT2G25810.1 | chr2:11012658-11013906 FORWARD LENGTH=250
Length = 249
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 10 TGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVL 57
+G +NPARS G A+V N W+D W++WVGP IG +A ++ VL
Sbjct: 188 SGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232
>AT4G17340.1 | chr4:9699318-9700250 FORWARD LENGTH=251
Length = 250
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 4 LATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
LA P +G +NPARS G AVV S +S WI+WVGP +G A+A L + V S
Sbjct: 186 LAAGPFSGGSMNPARSFGPAVV---SGDFSQIWIYWVGPLVGGALAGLIYGDVFIGS 239
>AT5G47450.1 | chr5:19248509-19249466 REVERSE LENGTH=251
Length = 250
Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 4 LATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRAS 60
LA P +G +NPARS G AVV S S WI+WVGP +G A+A L + V S
Sbjct: 186 LAAGPFSGGSMNPARSFGPAVV---SGDLSQIWIYWVGPLVGGALAGLIYGDVFIGS 239
>AT3G16240.1 | chr3:5505534-5506788 FORWARD LENGTH=251
Length = 250
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 4 LATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRASAR 62
LA P +G +NPARS G AV + +S W++WVGP IG +A L + V S+
Sbjct: 186 LAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIYGNVFMGSSE 241
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.134 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,517,131
Number of extensions: 46518
Number of successful extensions: 202
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 202
Number of HSP's successfully gapped: 24
Length of query: 71
Length of database: 11,106,569
Length adjustment: 43
Effective length of query: 28
Effective length of database: 9,927,681
Effective search space: 277975068
Effective search space used: 277975068
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 104 (44.7 bits)