BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0447000 Os07g0447000|Os07g0447000
(721 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799 129 7e-30
AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867 124 1e-28
AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704 118 1e-26
AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804 114 2e-25
AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878 113 5e-25
AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752 104 1e-22
AT4G19080.1 | chr4:10448813-10449796 REVERSE LENGTH=328 57 4e-08
>AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799
Length = 798
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 165/374 (44%), Gaps = 36/374 (9%)
Query: 41 QQFINKWELQCMXXXXXXXXXXXXXXXXXRKRHSSRVLSVLLWLAYLSADPVAVYVXXXX 100
++ ++KW ++ + RKR S ++L+ +LW AYL AD A Y
Sbjct: 9 KKILDKWNIRGLVIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTANYAVSQI 68
Query: 101 XXXXXXXX---DPRNQQQLVLFWAPFLLLHLGGQETMTAFSMEDNTLWKRHLLSLATQMA 157
DP ++L+ WAPFLLLHLGG +T+TA ++EDN LW+RHL L +Q
Sbjct: 69 TKNQGKETEPGDPPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWQRHLFGLVSQAL 128
Query: 158 TAIYVVSKQLRGDSRLVAPMVLVFVFGTAKYAERIWALRRA------------GSVAPGT 205
+Y V + L ++ L P+ L+F+ GT KY ER AL A
Sbjct: 129 AGVYAVVQSL--ENVLWPPITLLFITGTIKYVERTRALYSASLDKFKDRMLQRADAGSNY 186
Query: 206 SSSTANLVSRASSNAVWDTQGYYSQLCYVIER-----KLERNFEFILAVANEGFRLSLGF 260
+ SR SN T+ + + ER K +R+ L + GF+ F
Sbjct: 187 AKLMEEFASRKMSNL--PTEIFLTDEPDKHERPPTLVKPDRDLT-DLEIVQYGFK----F 239
Query: 261 FMDMTPSISLLPEDISEIKNSVEVFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFH 320
F + L E S + FK + A ++ E L +Y+ +YTK H
Sbjct: 240 FNTFKGLVVDLIFSFRERDESRDFFKELKP--GEALRIIETELGFLYESMYTKTAILH-- 295
Query: 321 IVPVCNVFHLIIKIALISVALALFMRARAGQKAHDVVDVIISYILLVGAIVLEICSVLMS 380
+ +F LI +L+S R + H DV+I+Y+L + I L++ S+++
Sbjct: 296 -TGIGTLFRLISFGSLLSSFFVFHRRPLKSEDFHG-ADVVITYVLFIVGIALDLASMVI- 352
Query: 381 FISSCWAYKTIITL 394
F+ S W + + L
Sbjct: 353 FLLSDWTFAVLRNL 366
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 44/228 (19%)
Query: 502 RGQWAQWVVEAKEDHLRSAAQQVLQVSN----IQGLEFVSSVLLWHIITDICLLVDEDED 557
RG+WA LR + ++++V I+ +++ S+LLWHI T++C + E+
Sbjct: 568 RGEWA----------LRDS--KLMEVDTLMRYIEKVDYDQSLLLWHIATELCF---QKEE 612
Query: 558 GGA---------ELRGPIRDLSEYTMYL-IADCGVMAGSEGHFVLRKGRHEVLSWLREKG 607
GG + R + +S+Y MYL I +M+ G +R + + KG
Sbjct: 613 GGKMEKLSREGYDDREFSKIISDYMMYLLIMRPKLMSEVAGIGTIRFRDTKAEAERFFKG 672
Query: 608 ESGCDRRKVIEEIRNEDSSFFADNYYPVL---DRARRV-------SSDLLVLEEPGD--- 654
D R + +E +++ P+L DR++ V + +L L+E +
Sbjct: 673 RQIKDLRDMKRA--SETVLLVSNDIEPILVKGDRSKSVLFDASMLAKELQNLKESSNEDG 730
Query: 655 RWELIAAVWMEMLCHISYNCGAGFHAKQLTTGGEFVTHVKMLLFMLGV 702
+W +++ VW+E+LC+ + +C A H QL+ GGE + V +L+ G+
Sbjct: 731 KWRVLSKVWVELLCYAASHCKATEHVAQLSRGGELLNFVWLLMAHFGL 778
>AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867
Length = 866
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 161/354 (45%), Gaps = 41/354 (11%)
Query: 70 RKRHSSRVLSVLLWLAYLSAD---PVAVYVXXXXXXXXXXXXDPRNQQQLVLFWAPFLLL 126
RKR R+L VL+W +YL AD AV + DP ++++ WAPFLLL
Sbjct: 39 RKRTPRRLLIVLVWSSYLLADWSANFAVGLISKNQGKDLKPDDPPQDKKVMALWAPFLLL 98
Query: 127 HLGGQETMTAFSMEDNTLWKRHLLSLATQMATAIYVVSKQLRGDSRLVAPMVLVFVFGTA 186
HLGG +T+TAF++EDN LW RH+ L Q +YVV L + L +VLVFV GT
Sbjct: 99 HLGGPDTITAFALEDNALWLRHVFGLVFQAIAGVYVVVMSL--PNSLWVVIVLVFVSGTI 156
Query: 187 KYAERIWAL--------RRAGSVAPGTSSSTANLVS--RASSNAVWDTQGYYSQLCYVIE 236
KY ER AL R + AP + A L+ +A A T+ +I+
Sbjct: 157 KYLERTTALYSASLDKFRDSMIQAPDPGPNYAKLMEEYKAKKEARLPTK------IVLID 210
Query: 237 RKLERNFEFIL---AVANEGFRLSL----------GFFMDMTPSISLLPEDISEIKNSVE 283
+ N L A+A++ + L FF + L E S+E
Sbjct: 211 EPDKENRPKKLEHPALASKKRKKDLTDLEIVQYAYKFFNTFKGLVVNLIFSFRERDESLE 270
Query: 284 VFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIKIALISVALAL 343
+F++ D A ++ EI L +YD L+TK H I V VF L++ +
Sbjct: 271 IFENLND-PEEALRIIEIELGFLYDALFTKIAILHTGIGTVSRVF---ASGTLVAAFIIF 326
Query: 344 FMRARAGQKAHDVVDVIISYILLVGAIVLEICSVLMSFIS--SCWAYKTIITLP 395
+ G H DV+++Y L +VL+ S+L+ S +C AY ++ P
Sbjct: 327 HKKPNKGTDFHG-ADVVVTYTLFAVGLVLDFISILLFLFSDWTCAAYSSLKDDP 379
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 44/230 (19%)
Query: 502 RGQWAQWVVEAKEDHLRSAAQQVLQVSNIQGLEFVSSVLLWHIITDICLLVDEDE---DG 558
RG+W ++L A++ V + +++ S+L+WHI T++C E E +G
Sbjct: 633 RGEWTL------RENLPVDAEREKLVRYVTKVDYDQSLLMWHIATELCYQQHEKETIPEG 686
Query: 559 GAELRGPIRD------LSEYTMYL-IADCGVMA--GSEGHFVLRKGRHEVLSWLREKGES 609
E R + +S+Y MYL I G+M+ G R E + +
Sbjct: 687 YDEQRKHYSNREFSKIISDYMMYLLILQPGLMSEVAGIGKIRFRDTLAETHKFFQ----- 741
Query: 610 GCDRRKVIEEIRNEDSSFF---------------ADNYYPVLDRARRVSSDLLVLEEP-- 652
R+ IE R+ +++ D VL A R++ DL +E+
Sbjct: 742 ----RRHIENDRSVETATLNILDVESEIEPMGVKGDRSKSVLFDASRLAKDLAEMEKTHN 797
Query: 653 GDRWELIAAVWMEMLCHISYNCGAGFHAKQLTTGGEFVTHVKMLLFMLGV 702
D+WE+++ VW+E+LC+ + +C + H +QL+ GGE + V +L+ G+
Sbjct: 798 KDKWEILSKVWVELLCYAACHCDSTAHVEQLSRGGELINFVWLLMAHFGL 847
>AT5G45460.1 | chr5:18417154-18419265 REVERSE LENGTH=704
Length = 703
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 163/357 (45%), Gaps = 52/357 (14%)
Query: 70 RKRHSSRVLSVLLWLAYLSAD---PVAVYVXXXXXXXXXXXXDPRNQQQLVLFWAPFLLL 126
RKR R L +++W +YL AD AV + DP ++L+ WAPFLLL
Sbjct: 39 RKRTPRRHLIIVIWSSYLLADWSANFAVGLISKNQGKDLKPDDPPQDKKLMALWAPFLLL 98
Query: 127 HLGGQETMTAFSMEDNTLWKRHLLSLATQMATAIYVVSKQLRGDSRLVAPMVLVFVFGTA 186
HLGG +T+TAF++EDN LW R++ L Q +YVV + L + L ++LVF+ GT
Sbjct: 99 HLGGPDTITAFALEDNALWLRNVFGLVFQAIAGVYVVLQSL--PNSLWVTILLVFISGTI 156
Query: 187 KYAERIWAL--------RRAGSVAPGTSSSTANLVS--RASSNAVWDTQGYYSQLCYVIE 236
KY ER AL R + P + A L+ +A A T ++ + E
Sbjct: 157 KYLERTTALYSASLDKFRDSMIQGPDPGPNYAKLMEEYKAKKEAKLPT-----KIILIDE 211
Query: 237 -------RKLERNFEFILAVANEGFRLSL----------GFFMDMTPSISLLPEDISEIK 279
+KLE ++A+E R L FF + L E
Sbjct: 212 PDKEHRPKKLEHP-----SLASETKRKELTHLEIAQYAYKFFNTFKGLVVNLIFSFRERD 266
Query: 280 NSVEVFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIKIALISV 339
S+E+F++ ED A ++ EI L +YD L+TK H + V V +A S+
Sbjct: 267 QSIEIFQNLED-PEEALRIIEIELGFLYDALFTKNAVLHTVLGTVSRV------VASGSL 319
Query: 340 ALALFMRARAGQKAHDV--VDVIISYILLVGAIVLEICSVLMSFISSCWAYKTIITL 394
A + + K D DV+I+YIL +VL+ S+L+ F+ S W + +L
Sbjct: 320 VAAFIIFHKISNKGRDFHGADVVITYILFAVGLVLDFISILL-FLFSDWTCAALSSL 375
>AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804
Length = 803
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 56/347 (16%)
Query: 70 RKRHSSRVLSVLLWLAYLSADPVAVYVXXXXXXXXXXXXD---PRNQQQLVLFWAPFLLL 126
R+R + ++ VL+W AYL AD A Y + P ++L+ FW+PFLLL
Sbjct: 39 RRRTAKKLFLVLIWSAYLLADWAADYAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLL 98
Query: 127 HLGGQETMTAFSMEDNTLWKRHLLSLATQMATAIYVVSKQLRGDSRLVAPMVLVFVFGTA 186
HLGG +T+TA ++EDN LW RHL SL Q +YV+ L +RL+ P +++FV G
Sbjct: 99 HLGGPDTITALALEDNELWDRHLFSLVCQAVATVYVI--LLSIPNRLLTPTLIMFVGGVI 156
Query: 187 KYAERIWALRRAGSVA--------PGTSSSTANLV----SRASSNAVWDTQGYYSQLCYV 234
KY ER AL A P ++ A L+ +R N D +
Sbjct: 157 KYVERTAALFSASLDKFKDSMLDDPDPGANYAKLMEEYEARKKMNMPTDV---------I 207
Query: 235 IERKLERNFE--------------FILAVANEGFRLSLGFFMDMTPSISLLPEDISEIKN 280
+ + E+ E ++ A + F + G +D+ ++ E +
Sbjct: 208 VVKDPEKGREGNTPVRPDNELTALQVIQYAYKYFNIFKGLIVDLI----FTNQERDESRK 263
Query: 281 SVEVFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIKIALISVA 340
+ + E A ++ E+ L LIYD L+TK H V I + + +
Sbjct: 264 FFDKLTAEE-----ALRIIEVELGLIYDCLFTKAEILHNWTGAVFR----FIALGCLVAS 314
Query: 341 LALFMRARAGQKAHDVVDVIISYILLVGAIVLEICSVLMSFISSCWA 387
L LF + Q +D DV+++Y LL+ I L+ ++LM F S W
Sbjct: 315 LCLFKMNKKDQ--YDGFDVVLTYALLICGIALDSIALLM-FCVSDWT 358
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 47/244 (19%)
Query: 497 GVGKFRGQWAQWVVEAKEDHLRSAAQQVLQVSNIQGLEFVSSVLLWHIITDICLL----- 551
G+ RG W +K+ + ++LQ + ++ S+LLWHI T++
Sbjct: 556 GISSARGNWTLLETSSKKKEDGTDHTKLLQY--VTEKDYDQSILLWHIATELLYQKPIDK 613
Query: 552 -VDEDEDGGAEL-------RGPIRDLSEYTMYL-IADCGVMAGSEGHFVLRKGRHEVLSW 602
V E E+ R + LS+Y MYL I +M+ G +R
Sbjct: 614 KVTEKEEHSTNREKEEHSNREFSKILSDYMMYLLIVQPTLMSAVSGIAKIR--------- 664
Query: 603 LREKGESGCD--RRKVIEEIRNEDSSFFADNYYPVL-------------DRARRVSSDLL 647
R+ E D +R+ +++ R + + +L DR++ V D
Sbjct: 665 FRDTCEEAKDFFQRRHVDKSRYVKKNLMKEACRAILSVNTEIDPMAVKGDRSKSVLFDAS 724
Query: 648 VL-----EEPGDRWELIAAVWMEMLCHISYNCGAGFHAKQLTTGGEFVTHVKMLL--FML 700
VL E + WE+++ VW+E+LC+ S +C + HA QL+ GGE + V +L+ F L
Sbjct: 725 VLAKELMNEGENMWEVVSKVWVELLCYASLHCDSQEHASQLSKGGELINFVWLLMAHFGL 784
Query: 701 GVPF 704
G F
Sbjct: 785 GDQF 788
>AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878
Length = 877
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 154/343 (44%), Gaps = 46/343 (13%)
Query: 70 RKRHSSRVLSVLLWLAYLSADPVAVYVXXXXXXXX---XXXXDPRNQQQLVLFWAPFLLL 126
RKR S +VL +W AYL AD A + +P+ +L FW PFLLL
Sbjct: 39 RKRSSRKVLLSFIWSAYLLADWSANFAAGQISDSQGDDPEPGEPKKSAELFAFWVPFLLL 98
Query: 127 HLGGQETMTAFSMEDNTLWKRHLLSLATQMATAIYVVSKQLRGDSRLVAPMVLVFVFGTA 186
HLGG +T+TA ++EDN LW RHLL L Q +YV+ + L + L P++LVF G
Sbjct: 99 HLGGPDTITALALEDNELWLRHLLGLFFQSVATVYVLLQSL--PNALWKPILLVFATGVI 156
Query: 187 KYAERIWALRRAGSVA--------PGTSSSTANLVSRASSNAVWDTQGYYSQLCYVIERK 238
KY ER AL A P + A L+ ++ +Q+ V E +
Sbjct: 157 KYVERTLALYLASLDKFKDSMIQRPDPGPNYAKLMEEYAAKK---DMKMPTQIIKVGEPE 213
Query: 239 LERNFEF------------ILAVANEGFRLSLGFFMDMTPSISLLPEDISEIKNSVEVFK 286
+ + IL A + F + G +D+ + + +E K + K
Sbjct: 214 KDPRDDAPVKPPDGFTPLNILQYAYKYFNIFKGLVVDLIFTF----QQRAESKRFFDSLK 269
Query: 287 SSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIK-IALISVALALFM 345
+ E A ++ E+ L+ IY LYTK H N + + IAL +A AL +
Sbjct: 270 AEE-----ALRILEVELNFIYAALYTKAEILH-------NWIGFLFRFIALGCLAAALRI 317
Query: 346 RARAGQKAHDVVDVIISYILLVGAIVLEICSVLMSFISSCWAY 388
+K + DV ++Y LL+G I L+ C L+ F +S W +
Sbjct: 318 FQYKSKKDYSGFDVGLTYALLLGGIALD-CIALIMFCASDWTF 359
>AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752
Length = 751
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 134/285 (47%), Gaps = 28/285 (9%)
Query: 109 DPRNQQQLVLFWAPFLLLHLGGQETMTAFSMEDNTLWKRHLLSLATQMATAIYVVSKQLR 168
DP ++LV WAPFLLLHLGG +T+TAFS+EDN LW RH L L Q +YVV + L
Sbjct: 75 DPPQNKKLVALWAPFLLLHLGGPDTITAFSLEDNALWNRHFLGLVFQALAGVYVVVQSL- 133
Query: 169 GDSRLVAPMVLVFVFGTAKYAERIWALRRAGSVAPGTSSSTANLVSRASSNAVWDTQGYY 228
+ L ++L+F+ GT+KY ER AL A S S A SN+ +D Y
Sbjct: 134 -PNVLSVIILLLFIAGTSKYLERTIALYLASSDKYRNSMLQA-------SNSRFD---YT 182
Query: 229 SQLCYVIERKLERNFEFILAVANEGFRLSLGFFMDMTPSISLLPEDI------SEIKNSV 282
Q R L+ + + + + R + P L +I E+++
Sbjct: 183 DQ-----TRDLDMDTKLASEMNMKEHRGQPKPLKLLQPHKELTHLEILQYAFFLELRDES 237
Query: 283 EVFKSSEDIVHMAYKLAEINLSLIYDYLYTKFGTRHFHIVPVCNVFHLIIKIALISVALA 342
+ F S+ + A+ + E L IY+ LYTK H + V L +L+S
Sbjct: 238 KAFFSALQLKDEAFCIIEAELDFIYEGLYTKGSVLHSWVGLVSRFISL---GSLLSAFTI 294
Query: 343 LFMRARAGQKAHDVVDVIISYILLVGAIVLEICSVLMSFISSCWA 387
R Q+ H D++I+Y L + I L++ S+ M F+ S W
Sbjct: 295 YHYRHNKIQEFHK-ADIVITYTLFLVGIALDVISIHM-FMVSDWT 337
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 530 IQGLEFVSSVLLWHIITDICLLVDEDEDGGAEL---------RGPIRDLSEYTMYL-IAD 579
I +++ S+L+WHI T++C ++ED E R + +S+Y MYL I
Sbjct: 559 ITDVDYEHSLLIWHIATELCY---QEEDSAKENCDKSEYHTNRKISKIISDYMMYLLIMQ 615
Query: 580 CGVMA--GSEGHFVLRKGRHEVLSWLREKG--ESGCDRRKVIEEIRNEDSSF-----FAD 630
+M+ G R E + ++ G + + +EI + D+S +
Sbjct: 616 PKLMSEVAGIGKIRFRDTLAEADRFFKKMGIIRDSRNVKLASKEILSADTSIEPREVKGN 675
Query: 631 NYYPVLDRARRVSSDLLVLEEP--GDRWELIAAVWMEMLCHISYNCGAGFHAKQLTTGGE 688
+ VL A ++ +L +E+ D+W++++ VW+E L H + +C A + L+ GGE
Sbjct: 676 HSKSVLFEASSLAKELQRVEKNFGEDKWKILSKVWLEFLFHAASHCDATTRMELLSKGGE 735
Query: 689 FVTHVKMLLFMLGV 702
F+ V +L+ G+
Sbjct: 736 FINFVWLLMAHFGL 749
>AT4G19080.1 | chr4:10448813-10449796 REVERSE LENGTH=328
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 530 IQGLEFVSSVLLWHIITDICLLVDEDEDGGAELRGP--IRDLSEYTMYL-IADCGVMAGS 586
+ +E+ +L+WH+ T++ L E ++ +R + +S+Y MYL +A +M+
Sbjct: 108 VTEVEYDQGILVWHVATEL-LHQTEVDNAARNVRSKEYSKTISDYMMYLLVAQSSLMSTV 166
Query: 587 EGHFVLR--------KGRHEVLSWLREKGESGC-DRRKVIEEIRNEDSSFFADN------ 631
G ++ K E ++ G D +K I + + F N
Sbjct: 167 AGIDKIKFKDAIAEAKNSKEAKKLFQKMHVEGSRDAKKACAAIVDSFTEFELGNGNARRY 226
Query: 632 -YYPVLDRARRVSSDLL-VLEEPGDR--WELIAAVWMEMLCHISYNCGAGFHAKQLTTGG 687
+L +A ++ +LL + E G+ W++++ VW+EMLC+ + +C + HA QL GG
Sbjct: 227 QSKSMLFQASMLAKELLHITNERGNDAMWKVVSKVWVEMLCYAATHCDSKQHAAQLNKGG 286
Query: 688 EFVTHVKMLL--FMLGVPFLRDVKE 710
E + V +L+ F LG F R KE
Sbjct: 287 ELINFVWLLMAHFGLGEQF-RTTKE 310
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,081,927
Number of extensions: 536253
Number of successful extensions: 1663
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1648
Number of HSP's successfully gapped: 12
Length of query: 721
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 615
Effective length of database: 8,200,473
Effective search space: 5043290895
Effective search space used: 5043290895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 115 (48.9 bits)