BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0446100 Os07g0446100|AK100927
(513 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463 320 1e-87
AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377 262 3e-70
AT4G35450.5 | chr4:16839862-16841759 FORWARD LENGTH=351 65 6e-11
AT2G17390.1 | chr2:7555870-7557743 FORWARD LENGTH=345 64 2e-10
AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448 63 3e-10
AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864 57 2e-08
AT1G63900.2 | chr1:23717056-23719086 FORWARD LENGTH=348 57 3e-08
AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400 56 4e-08
AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405 55 1e-07
AT1G59560.1 | chr1:21881741-21883632 FORWARD LENGTH=339 55 1e-07
AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379 52 8e-07
AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731 51 1e-06
AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653 51 2e-06
AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389 49 7e-06
>AT3G23280.1 | chr3:8321588-8324109 FORWARD LENGTH=463
Length = 462
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/274 (56%), Positives = 188/274 (68%), Gaps = 24/274 (8%)
Query: 1 MGLQQSKEELVYQQVNYGNADGIRALRAQGAGLEWIDKEGKTPLMVASMRPDLINVVQVL 60
MG QQSK EL+YQQV+YGN++GIRAL G LEW+D+EGKTPL++A M +L +V + L
Sbjct: 1 MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTL 60
Query: 61 IELGANVNAYRPGSYCGTALHHAAKKGLEQTVHLLLSHGANPFITNDDCHTALDLAREKG 120
IELG+NVNAYRPG + GT LHHAAK+GLE TV LLLSHGANP + NDDC T L++AR KG
Sbjct: 61 IELGSNVNAYRPGRHAGTPLHHAAKRGLENTVKLLLSHGANPLVLNDDCQTPLEVARVKG 120
Query: 121 HVNVVRAIEGRISLFCGWMRENYGPGFLEAFAPQFLTRKIWAVILPREARNQTRPLKLEL 180
NVVRAIE I LF GWMRE YGP FL+ FAPQ L+R++W VI+P +RN T+P KLEL
Sbjct: 121 FSNVVRAIEKHICLFSGWMREFYGPTFLDLFAPQLLSRRVWVVIVPTGSRNPTKPFKLEL 180
Query: 181 TIYPELQASKPQAVIKLWKCQLEEPKFNQANPSVTIFDKGT------------------- 221
+Y LQ ++P+ V+ LWK LEEPK Q++ SV I D T
Sbjct: 181 VVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVCASHGRRR 240
Query: 222 -----RTRYKLLPVCEGDKQQLQWFYSACCGIPQ 250
+TR K P EGD QQL+WF AC GIPQ
Sbjct: 241 PQVVRQTRLKFAPSTEGDSQQLKWFCDACKGIPQ 274
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 85/125 (68%), Gaps = 23/125 (18%)
Query: 392 PTAPPLA---VGTFYDGPIQYPSIDSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESD 448
P+APPL + T DGPI YPSIDSTPVD +PSA ++ PA EG+ K
Sbjct: 358 PSAPPLTDDDIATVDDGPIHYPSIDSTPVD--LPSA-------ASLPASTEGERK----- 403
Query: 449 ANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQII 508
GNT GTC ICLDAP E C+PCGH+AGCMSCLK+I+SK WGCP+CRAKI+Q+I
Sbjct: 404 ----EDGNT--GTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVI 457
Query: 509 RLYAV 513
+LY V
Sbjct: 458 KLYRV 462
>AT4G14365.1 | chr4:8271660-8273685 REVERSE LENGTH=377
Length = 376
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/277 (48%), Positives = 177/277 (63%), Gaps = 27/277 (9%)
Query: 1 MGLQQS--KEELVYQQVNYGNADGIRALRAQGAGLEWIDKEGKTPLMVASMRPDLINVVQ 58
MG QQS K+E+++Q+V+ N +GI++L +GAGLE +DK G+TPL++A DL +V +
Sbjct: 1 MGQQQSQSKDEMLFQEVSNNNVEGIKSLHHEGAGLEGVDKLGRTPLILACTNDDLYDVAK 60
Query: 59 VLIELGANVNAYRPGSYCGTALHHAAKKGLEQTVHLLLSHGANPFITNDDCHTALDLARE 118
L+ELG+NVNAYR G GT LHHAAK+GL TV LLLSHGANP + +DD TAL++AR+
Sbjct: 61 TLLELGSNVNAYRSGCNGGTPLHHAAKRGLVHTVKLLLSHGANPLVLDDDVKTALEVARD 120
Query: 119 KGHVNVVRAIEGRISLFCGWMRENYGPGFLEAFAPQFLTRKIWAVILPREARNQTRPLKL 178
+G+ NVVRAIE I LF G MRE G L FAPQ L+RK+W V++P +RN T+PLKL
Sbjct: 121 EGYSNVVRAIESHICLFSGCMREYSGSSLLNLFAPQLLSRKVWVVVVPTGSRNPTKPLKL 180
Query: 179 ELTIYPELQASKPQAVIKLWKCQLEEPKFNQANPSVTIFDKG------------------ 220
EL +Y +Q ++P+ VI LWK LEEPK + + SV I D
Sbjct: 181 ELVLYDSIQDAQPRMVIPLWKANLEEPKSFRCDDSVMIIDDSRSPKSMRQRRESGFISQA 240
Query: 221 -------TRTRYKLLPVCEGDKQQLQWFYSACCGIPQ 250
+ R KL +GD +Q+ WF AC G+PQ
Sbjct: 241 RRWAQVDRQIRLKLAAEIKGDMKQMNWFSEACKGVPQ 277
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 454 SGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 513
+ N G CVIC+DAP E C+PCGH+AGC+SCLK+IE+KK GCP+CRA I+Q+I+LY V
Sbjct: 317 TANKEDGLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376
>AT4G35450.5 | chr4:16839862-16841759 FORWARD LENGTH=351
Length = 350
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 10 LVYQQVNYGNADGIRALRAQGAGLEWIDKEGKTPLMVASMRPDLINVVQVLIELGANVNA 69
+V+Q + G+ +G++A A G + D EG+T L A +L QVLI+ GA+VNA
Sbjct: 229 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 287
Query: 70 YRPGSYCGTALHHAAKKGLEQTVHLLLSHGANPFITNDDCHTALDLAREKGHVNVVRAIE 129
T LH+AA G ++ V LLL +GA + N D T +D+A+ + VV+ +E
Sbjct: 288 VDKNK--NTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 345
>AT2G17390.1 | chr2:7555870-7557743 FORWARD LENGTH=345
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 10 LVYQQVNYGNADGIRALRAQGAGLEWIDKEGKTPLMVASMRPDLINVVQVLIELGANVNA 69
+V+Q + G+ +G++A A G + D EG+T L A + + QVL++ GAN NA
Sbjct: 223 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGE-VRCAQVLLDAGANANA 281
Query: 70 YRPGSYCGTALHHAAKKGLEQTVHLLLSHGANPFITNDDCHTALDLAREKGHVNVVRAIE 129
T LH+AA G ++ V LLL +GA N D +D+AR ++VV+ +E
Sbjct: 282 IDKNK--NTPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVARLNNQLDVVKLLE 339
>AT2G38185.4 | chr2:16000155-16002699 FORWARD LENGTH=448
Length = 447
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%)
Query: 413 DSTPVDVTMPSADGGTAVSSAKPAENEGDAKPAESDANASNSGNTPPGTCVICLDAPVEG 472
DS + D G+++ S + DA E N + N C IC D P +
Sbjct: 347 DSARTRLLADKDDDGSSMGSCDDSYANDDADLEEFMGNDGEASNRSRRLCAICFDVPRDC 406
Query: 473 ACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 513
+PCGH C C ++ CPICR K+ ++ R+Y V
Sbjct: 407 FFLPCGHSVSCYECGTTMQEADGSCPICRRKMKKVKRIYTV 447
>AT5G04460.1 | chr5:1260009-1263695 FORWARD LENGTH=864
Length = 863
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 445 AESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKI 504
AE+ + S + GTC +C D ++ CGHM C C ++ CP+CRA I
Sbjct: 794 AETSEDGSRWSHVSKGTCCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKCPLCRAPI 853
Query: 505 NQIIRLYAV 513
++IR Y++
Sbjct: 854 IEVIRAYSI 862
>AT1G63900.2 | chr1:23717056-23719086 FORWARD LENGTH=348
Length = 347
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 431 SSAKPAE--NEGDAKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLK 488
++AK AE +EG ES ++++ + P CVICL+ +PCGHM C +C
Sbjct: 267 AAAKRAELESEGSNGTRESISDSTKKEDAVPDLCVICLEQEYNAVFVPCGHMCCCTACSS 326
Query: 489 DIESKKWGCPICRAKINQIIRLY 511
+ S CP+CR +I+ ++ Y
Sbjct: 327 HLTS----CPLCRRRIDLAVKTY 345
>AT2G38195.1 | chr2:16003836-16006261 FORWARD LENGTH=400
Length = 399
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 447 SDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQ 506
+D ASN C IC DAP + +PCGH C C I+ K CPICR KI
Sbjct: 338 NDVEASNKS-----LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMH 392
Query: 507 IIRLYA 512
+ R+Y
Sbjct: 393 VKRIYT 398
>AT2G38220.1 | chr2:16008112-16010538 FORWARD LENGTH=405
Length = 404
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 447 SDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQ 506
+D ASN C IC DAP + +PCGH C C I+ K CPICR K+
Sbjct: 343 NDVEASNKS-----LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIH 397
Query: 507 IIRLYA 512
+ R+Y
Sbjct: 398 VKRIYT 403
>AT1G59560.1 | chr1:21881741-21883632 FORWARD LENGTH=339
Length = 338
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 442 AKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICR 501
AKP + S G+TP CV+CLD A + CGHM C C + + CP+CR
Sbjct: 273 AKPV-TGGGTSRDGDTPD-LCVVCLDQKYNTAFVECGHMCCCTPCSLQLRT----CPLCR 326
Query: 502 AKINQIIRLY 511
+I Q++++Y
Sbjct: 327 ERIQQVLKIY 336
>AT5G19080.1 | chr5:6378400-6380287 FORWARD LENGTH=379
Length = 378
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 451 ASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRL 510
AS +T CVICL P + A +PC H+ C C +++ + CPICR I++++++
Sbjct: 310 ASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKI 369
>AT1G30860.1 | chr1:10986696-10989246 REVERSE LENGTH=731
Length = 730
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 448 DANAS-----NSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRA 502
DANAS + N C +C + VE CGHM C+ C ++ CPICRA
Sbjct: 657 DANASLQHKAHQENPMKRKCCVCDETQVEAVLYRCGHMCMCLKCANELHWSGGKCPICRA 716
Query: 503 KINQIIRL 510
+I ++R+
Sbjct: 717 QIVDVVRV 724
>AT2G34920.1 | chr2:14728375-14730816 REVERSE LENGTH=653
Length = 652
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 462 CVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLY 511
C +C + VE CGHM C+ C +++ CPIC AKI ++R++
Sbjct: 598 CCVCNETQVETLLYRCGHMCTCLRCANELQYNGGKCPICHAKILDVVRVF 647
>AT3G09770.1 | chr3:2996402-2997835 REVERSE LENGTH=389
Length = 388
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 458 PPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRL 510
P CVICL P + +PC HM C C K + + CPICR + +++ +
Sbjct: 315 PGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 367
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,999,227
Number of extensions: 465107
Number of successful extensions: 1848
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 1871
Number of HSP's successfully gapped: 19
Length of query: 513
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 410
Effective length of database: 8,282,721
Effective search space: 3395915610
Effective search space used: 3395915610
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)