BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0443500 Os07g0443500|Os07g0443500
(75 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127 77 3e-15
AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101 75 7e-15
AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102 70 2e-13
AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101 68 1e-12
AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216 63 4e-11
AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78 61 1e-10
AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264 60 2e-10
AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59 60 3e-10
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 58 9e-10
AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315 57 1e-09
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 54 2e-08
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 53 2e-08
AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299 50 2e-07
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 49 8e-07
AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288 48 1e-06
>AT1G75250.1 | chr1:28245073-28245453 REVERSE LENGTH=127
Length = 126
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 3 SEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARR 62
S W+ +NK+FE+A+A Y + PD WH V++A+GG KT +EV+ H++ILV+D+ IE R
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGG-KTVEEVKRHYDILVEDLINIETGR 68
Query: 63 VPFPKYNT 70
VP P Y T
Sbjct: 69 VPLPNYKT 76
>AT4G39250.1 | chr4:18271457-18271857 REVERSE LENGTH=101
Length = 100
Score = 75.1 bits (183), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 5 WSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVP 64
W+ ++NK FEQA+A Y + P+ W V++ +GG KT +EV+ H+E+LV DI IE VP
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGG-KTTEEVKRHYELLVQDINSIENGHVP 72
Query: 65 FPKYNTQGA 73
FP Y T G
Sbjct: 73 FPNYRTSGG 81
>AT2G21650.1 | chr2:9259654-9260419 FORWARD LENGTH=102
Length = 101
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 5 WSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVP 64
W+ ++NK FE+A+A Y + PD WH V+RA+GG KT +E + +++LV DI+ IE VP
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGG-KTPEEAKRQYDLLVRDIESIENGHVP 72
Query: 65 FPKYNT 70
FP Y T
Sbjct: 73 FPDYKT 78
>AT1G19510.1 | chr1:6756483-6757290 REVERSE LENGTH=101
Length = 100
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 8 EENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVPFPK 67
++NK+FE+A+A Y + PD W V++A+ G+K+A+EV+ H++ILV+D+ IE VP PK
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYDILVEDLMNIEQDLVPLPK 73
Query: 68 YNT 70
Y T
Sbjct: 74 YKT 76
>AT5G04760.1 | chr5:1373752-1374529 REVERSE LENGTH=216
Length = 215
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 2 ASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEAR 61
+S+W++ E+K+FEQA+ + EG+P+ W +++ + K+A EVR H+E+LV D+ I++
Sbjct: 3 SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQL--HKSAGEVREHYEVLVHDVFEIDSG 60
Query: 62 RVPFPKY 68
RV P Y
Sbjct: 61 RVDVPDY 67
>AT2G18328.1 | chr2:7964478-7964711 FORWARD LENGTH=78
Length = 77
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 9 ENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVPFPKY 68
E+K FE A+A + + PD W K++RA+GG K+ +EV+ H+E+L+ D+ IE+ R P P+Y
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGG-KSTEEVKRHYELLLRDVNDIESGRYPQPRY 73
>AT3G11280.1 | chr3:3533477-3534393 REVERSE LENGTH=264
Length = 263
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 5 WSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRVP 64
W+KEENK+FE+A+A Y E +PD W KV+ + G KT +V + L +D+ IEA RVP
Sbjct: 33 WTKEENKMFERALAIYAEDSPDRWFKVASMIPG-KTVFDVMKQYSKLEEDVFDIEAGRVP 91
Query: 65 FPKY 68
P Y
Sbjct: 92 IPGY 95
>AT4G36570.1 | chr4:17254660-17254836 FORWARD LENGTH=59
Length = 58
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Query: 5 WSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFE 49
W+++ENKLFE+A+A Y + PD WH V+RA+GG K+A+EVR H+E
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGG-KSAEEVRRHYE 55
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 58.2 bits (139), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 2 ASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEAR 61
+S W+KEENK FE+A+A Y + PD W KV+ + G KT +V + L +D+ IEA
Sbjct: 28 SSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPG-KTISDVMRQYSKLEEDLFDIEAG 86
Query: 62 RVPFPKYNT 70
VP P Y +
Sbjct: 87 LVPIPGYRS 95
>AT1G49010.1 | chr1:18132714-18133778 FORWARD LENGTH=315
Length = 314
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 1 MASEWSKEENKLFEQAIAYYG---EGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKL 57
+ + WS+EE K FE AIA + E D W+K+S +M +K +EV+ H++IL++D+K
Sbjct: 4 VVATWSREEEKAFENAIALHCVEEEITEDQWNKMS-SMVPSKALEEVKKHYQILLEDVKA 62
Query: 58 IEARRVPFPKYN 69
IE +VP P+Y+
Sbjct: 63 IENGQVPLPRYH 74
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 2 ASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEAR 61
++W+ EENK FE A+A+Y + PD W +V+ + G KT +V + L +D+ IEA
Sbjct: 26 GTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPG-KTVGDVIKQYRELEEDVSDIEAG 84
Query: 62 RVPFPKY 68
+P P Y
Sbjct: 85 LIPIPGY 91
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 53.1 bits (126), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 2 ASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEAR 61
+ W+ ENK FE A+A Y + PD W KV+ + G +D +R + L D+ IEA
Sbjct: 31 GATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIR-QYNDLEADVSSIEAG 89
Query: 62 RVPFPKYNT 70
+P P Y T
Sbjct: 90 LIPVPGYIT 98
>AT5G08520.1 | chr5:2755470-2757741 REVERSE LENGTH=299
Length = 298
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 2 ASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEAR 61
S WS+E++ FE+A+A + + + W K++ + G K+ ++++ H+E+LV+D+ IE+
Sbjct: 9 GSVWSREDDIAFERALANNTDESEERWEKIAADVPG-KSVEQIKEHYELLVEDVTRIESG 67
Query: 62 RVPFPKYNTQGAWN 75
VP P Y + N
Sbjct: 68 CVPLPAYGSPEGSN 81
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MASEWSKEENKLFEQAIAYYGEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEA 60
+ S WSK+++ FE+A+A Y + W K++ + G KT ++V H+ IL D+ LIE+
Sbjct: 9 VGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPG-KTLEQVIEHYNILARDVMLIES 67
Query: 61 RRVPFPKYN 69
V P Y+
Sbjct: 68 GCVRLPDYD 76
>AT3G10580.1 | chr3:3307083-3308230 REVERSE LENGTH=288
Length = 287
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 5 WSKEENKLFEQAIAYY-GEGAPDLWHKVSRAMGGTKTADEVRLHFEILVDDIKLIEARRV 63
W ++++K FE A+ + EG+PD +++ + K EV +++ LVDD+ LIE+ +
Sbjct: 8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFL--QKPLKEVYSYYQALVDDVTLIESGKY 65
Query: 64 PFPKY 68
P PKY
Sbjct: 66 PLPKY 70
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,771,972
Number of extensions: 56411
Number of successful extensions: 217
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 207
Number of HSP's successfully gapped: 16
Length of query: 75
Length of database: 11,106,569
Length adjustment: 47
Effective length of query: 28
Effective length of database: 9,818,017
Effective search space: 274904476
Effective search space used: 274904476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 104 (44.7 bits)