BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0417200 Os07g0417200|AK105371
(382 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12120.1 | chr3:3860592-3861743 REVERSE LENGTH=384 472 e-133
AT2G29980.1 | chr2:12781787-12784946 REVERSE LENGTH=387 218 3e-57
AT3G11170.1 | chr3:3499959-3502126 FORWARD LENGTH=447 213 2e-55
AT5G05580.1 | chr5:1664331-1666345 FORWARD LENGTH=436 207 8e-54
AT4G30950.1 | chr4:15057278-15059673 REVERSE LENGTH=449 76 3e-14
>AT3G12120.1 | chr3:3860592-3861743 REVERSE LENGTH=384
Length = 383
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 221/372 (59%), Positives = 282/372 (75%), Gaps = 5/372 (1%)
Query: 14 RSGSSAAMQRSPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYFALVG 73
+ + +R P +KPPF++GD+KKAIPPHCF RS+ +SFSYL+ D+ IA+ Y A
Sbjct: 14 KKSETDTTKRVPCEKPPFSVGDLKKAIPPHCFKRSIPRSFSYLISDIIIASCFYYVATNY 73
Query: 74 IPALPSILRLVAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYXXXXXXXXXXXHSALLTP 133
LP L +AWPLYWA QG VLTG+WVI HECGHHAFSDY HS LL P
Sbjct: 74 FSLLPQPLSYLAWPLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVP 133
Query: 134 FFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRLVYIALQLTLAWPL 193
+FSWKYSHRRHH+NTGS+E+DEV+V K+KSA+ WY Y+ NP+GR++ + +Q L WPL
Sbjct: 134 YFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYL-NNPLGRIMMLTVQFVLGWPL 192
Query: 194 YLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLALHRLTAAYGLWWV 253
YLAFN+SG+PY CH+ P +P+++D+ER+Q+ +SDA ILAV L+R AA G+ +
Sbjct: 193 YLAFNVSGRPYDGF-ACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASM 251
Query: 254 VRVYGVPVMIVGALFVLITYLHHTHRALPHYDSSEWEWLRGSLATVDRDYGVLNRVLHNV 313
+ +YGVP++IV A VLITYL HTH +LPHYDSSEW+WLRG+LATVDRDYG+LN+V HN+
Sbjct: 252 ICLYGVPLLIVNAFLVLITYLQHTHPSLPHYDSSEWDWLRGALATVDRDYGILNKVFHNI 311
Query: 314 TDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYKFDRTPIIEATWREAKECMYVEP-RER 372
TDTHV HHLF +MPHY+AMEAT+A +P+LG+YY+FD TP A +REAKEC+YVEP RE
Sbjct: 312 TDTHVAHHLFSTMPHYNAMEATKAIKPILGDYYQFDGTPWYVAMYREAKECIYVEPDREG 371
Query: 373 D--GIYWYNNKF 382
D G+YWYNNK
Sbjct: 372 DKKGVYWYNNKL 383
>AT2G29980.1 | chr2:12781787-12784946 REVERSE LENGTH=387
Length = 386
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 187/340 (55%), Gaps = 21/340 (6%)
Query: 15 SGSSAAMQR-SPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYFALVG 73
+G +R P +PPF +GDI+ AIP HC+ +S ++S SY++ D+ A L A+
Sbjct: 17 AGDRKKEERFDPSAQPPFKIGDIRAAIPKHCWVKSPLRSMSYVVRDIIAVAALAIAAV-- 74
Query: 74 IPALPSILRLVAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYXXXXXXXXXXXHSALLTP 133
+ WPLYWAAQG++ ++V+GH+CGH +FSD HS +L P
Sbjct: 75 -----YVDSWFLWPLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVP 129
Query: 134 FFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRLVYIALQLTLAWPL 193
+ W+ SHR HH N G +E DE +V LP + L Y LA+PL
Sbjct: 130 YHGWRISHRTHHQNHGHVENDESWV-----PLPERVYKKLPHSTRMLRYTVPLPMLAYPL 184
Query: 194 YLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLALHRLTAAYGLWWV 253
YL + G+ H++PYS LF+ ER + S + ++L L+ +G V
Sbjct: 185 YLCYRSPGKE-----GSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAV 239
Query: 254 VRVYGVPVMIVGALFVLITYLHH--THRALPHYDSSEWEWLRGSLATVDRDYGVLNRVLH 311
++VYGVP +I +TYLHH LP Y EW +LRG L T+DRDYG+ N + H
Sbjct: 240 LKVYGVPYIIFVMWLDAVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTIDRDYGIFNNIHH 299
Query: 312 NVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYKFDRT 351
++ THV+HHLFP +PHYH ++AT+AA+ VLG YY+ +T
Sbjct: 300 DI-GTHVIHHLFPQIPHYHLVDATKAAKHVLGRYYREPKT 338
>AT3G11170.1 | chr3:3499959-3502126 FORWARD LENGTH=447
Length = 446
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 175/326 (53%), Gaps = 20/326 (6%)
Query: 24 SPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYFALVGIPALPSILRL 83
P PPF L DI+ AIP HC+ ++ KS SY++ D+AI FAL A +
Sbjct: 89 DPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIV-----FALAAGAAY--LNNW 141
Query: 84 VAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYXXXXXXXXXXXHSALLTPFFSWKYSHRR 143
+ WPLYW AQG++ ++V+GH+CGH +FS+ HS++L P+ W+ SHR
Sbjct: 142 IVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRT 201
Query: 144 HHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRLVYIALQLTLAWPLYLAFNLSGQP 203
HH N G +E DE + + P + + LA+P YL G+
Sbjct: 202 HHQNHGHVENDESWHPMSEKIY-----NTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKK 256
Query: 204 YPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLALHRLTAAYGLWWVVRVYGVPVMI 263
HY P S LF +ER VL S A A+ L L G ++++YG+P I
Sbjct: 257 -----GSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWI 311
Query: 264 VGALFVLITYLHH--THRALPHYDSSEWEWLRGSLATVDRDYGVLNRVLHNVTDTHVLHH 321
+TYLHH LP Y EW +LRG L T+DRDYG++N + H++ THV+HH
Sbjct: 312 NVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDI-GTHVIHH 370
Query: 322 LFPSMPHYHAMEATRAARPVLGEYYK 347
LFP +PHYH +EAT AA+PVLG+YY+
Sbjct: 371 LFPQIPHYHLVEATEAAKPVLGKYYR 396
>AT5G05580.1 | chr5:1664331-1666345 FORWARD LENGTH=436
Length = 435
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 181/342 (52%), Gaps = 23/342 (6%)
Query: 10 LLLRRSGSSAAMQR-SPVDKPPFTLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLY 68
L +S S +R P PPF L DI+ AIP HC+ ++ S SY++ D+AI GL
Sbjct: 67 LTTLQSPSEEDTERFDPGAPPPFNLADIRAAIPKHCWVKNPWMSMSYVVRDVAIVFGLAA 126
Query: 69 FALVGIPALPSILRLVAWPLYWAAQGSVLTGVWVIGHECGHHAFSDYXXXXXXXXXXXHS 128
A + WPLYW AQG++ ++V+GH+CGH +FS+ HS
Sbjct: 127 VAAY-------FNNWLLWPLYWFAQGTMFWALFVLGHDCGHGSFSNDPRLNSVAGHLLHS 179
Query: 129 ALLTPFFSWKYSHRRHHANTGSMEKDEVYVAKKKSALPWYTPYVFGNPVGRLVYIALQL- 187
++L P+ W+ SHR HH N G +E DE + +S Y ++ L
Sbjct: 180 SILVPYHGWRISHRTHHQNHGHVENDESWHPLPESI------YKNLEKTTQMFRFTLPFP 233
Query: 188 TLAWPLYLAFNLSGQPYPRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVLLALHRLTAA 247
LA+P YL +N S P HY P S LF +E+ VL S A A+ L L
Sbjct: 234 MLAYPFYL-WNRS----PGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFV 288
Query: 248 YGLWWVVRVYGVPVMIVGALFVLITYLHH--THRALPHYDSSEWEWLRGSLATVDRDYGV 305
G ++++YG+P I +TYLHH LP Y EW +LRG L T+DRDYG
Sbjct: 289 MGPIQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGW 348
Query: 306 LNRVLHNVTDTHVLHHLFPSMPHYHAMEATRAARPVLGEYYK 347
+N + H++ THV+HHLFP +PHYH +EAT AA+PVLG+YY+
Sbjct: 349 INNIHHDI-GTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYR 389
>AT4G30950.1 | chr4:15057278-15059673 REVERSE LENGTH=449
Length = 448
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 134/345 (38%), Gaps = 47/345 (13%)
Query: 32 TLGDIKKAIPPHCFHRSVIKSFSYLLHDLAIAAGLLYFALVGIPALPSILRLVAWPLYWA 91
TL DI +P F +K+ +L I+ L I P L PL WA
Sbjct: 106 TLKDIMDTLPKEVFEIDDLKALKSVL----ISVTSYTLGLFMIAKSPWYLL----PLAWA 157
Query: 92 AQGSVLTGVWVIGHECGHHAFSDYXXXXXXXXXXXHSALLTPFFSWKYSHRRHHANTGSM 151
G+ +TG +VIGH+C H +FS L+ P+ W++ H RHHA T +
Sbjct: 158 WTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNML 217
Query: 152 EKDEVYVAKKKSALPWYTPYVF-GNPVGRLVY------IALQLTLAWPLYLAFNLSGQPY 204
D + +P P F +PV R I L++A + FNL
Sbjct: 218 VHDTAW-----QPVP---PEEFESSPVMRKAIIFGYGPIRPWLSIAHWVNWHFNLKK--- 266
Query: 205 PRLVTCHYDPYSPLFSDQERVQVLVSDAAILAVL-LALHRLTAAYGLWWVVRVYGVPVMI 263
F E +V +S A + A + + + G+ V+ + +P +
Sbjct: 267 --------------FRASEVNRVKISLACVFAFMAVGWPLIVYKVGILGWVKFWLMPWLG 312
Query: 264 VGALFVLITYLHHTHRALPHYDSSEWEWLRGSL-ATVDRDYGVLNRVLHNVTDTHVLHHL 322
T +HHT +P + EW + L TV DY +L + + H+ HH+
Sbjct: 313 YHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHI 372
Query: 323 FPSMPHYHAMEATRAARPVLGEYYKFDRTPIIEATWREAKECMYV 367
P +P Y+ A + + G+Y T + WR K M V
Sbjct: 373 SPRIPSYNLRAAHESIQENWGKY-----TNLATWNWRLMKTIMTV 412
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,526,500
Number of extensions: 349530
Number of successful extensions: 927
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 908
Number of HSP's successfully gapped: 5
Length of query: 382
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 282
Effective length of database: 8,364,969
Effective search space: 2358921258
Effective search space used: 2358921258
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 112 (47.8 bits)