BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0406800 Os07g0406800|AK101812
         (463 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67320.3  | chr1:25205520-25208966 REVERSE LENGTH=491          646   0.0  

>AT1G67320.3 | chr1:25205520-25208966 REVERSE LENGTH=491
          Length = 490

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/493 (61%), Positives = 373/493 (75%), Gaps = 43/493 (8%)

Query: 1   MEIVRSHRQIXXXXXXXXXXXXXXXXLPTYRVAPQLEVRLEEFELFAIDRLRVLKGIADG 60
           ME++RS ++                 LP Y  AP +EVRLEEFELFAIDRLRVLKG++DG
Sbjct: 1   MEVIRSQKR------TVSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDG 54

Query: 61  LSRGKRPEEMEKLVKELWKAHMRHQDPTETLNKDIISHFVLRLVYCRTEELRKWFLSMET 120
           L+R + P EM+ LV+ LWK HMR  + +E +NKDIISHFVLRLVYCR++EL+KWFLSMET
Sbjct: 55  LARARNPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMET 114

Query: 121 TLFRYRFRLESPESQRMLMSEFRLPYKALPHSEFEAVKDKLSQVARTIGQ---------- 170
            LFR+RFRL+  E QR ++ EF LPYKA+  +E E++K++L  VAR+ GQ          
Sbjct: 115 ALFRHRFRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDGTCNML 174

Query: 171 ---------------------------SAAVESVFFKVPFEEVPDLVASRRVFLSKGYAY 203
                                      S AVE++++KVPFEEVPDLVASRRV L KG+A+
Sbjct: 175 YFDPMFTLSHLAVKLVPFLMEKFLSFLSFAVENIYYKVPFEEVPDLVASRRVLLQKGFAF 234

Query: 204 VAMSQVVSLVVTQFRCNISKALVLTNRKWTATIKEQEKDRLTPIVEALSNAYFGPDYSQP 263
           VA +Q+VSLVVTQFR ++SKAL+LTNRKWT TI+E+EKDRLTPIVEALS +Y GPDYSQ 
Sbjct: 235 VAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQS 294

Query: 264 KDAVEISLKDIDQLAKTSFPLCMRHMLEKLRENHHLKHGGRMQXXXXXXXXXXXXEDALA 323
            +  +ISLKDIDQ++K+SFPLCMRH+ EKLRE+HHLKHGGRMQ            +DALA
Sbjct: 295 NEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALA 354

Query: 324 FWRAEFSQKVGSERFDKEYAYSIRHNYGKEGKRTDYTPYSCQKIISATPGVGDHHGCPYR 383
           FWR EF++KVGSERFDKEYAY+IRHNYGKEGKRTDYTPY+C KII++ PG GDHHGCPYR
Sbjct: 355 FWREEFTKKVGSERFDKEYAYAIRHNYGKEGKRTDYTPYACSKIITSAPGAGDHHGCPYR 414

Query: 384 HFGEDNLRAALNKMGISGHPLEEIMDKVKNRHYQLACTMTFEAEHGVSCDTGINHPNQYF 443
           HF EDNL+AAL++MG+S   +E++MDKV+NRHYQLACT+TFEA +G SCDTGINHPNQYF
Sbjct: 415 HFSEDNLKAALSRMGLSSRGMEDVMDKVRNRHYQLACTLTFEAVYGTSCDTGINHPNQYF 474

Query: 444 SESQKVLKAKNQA 456
            ESQK+LK+K  A
Sbjct: 475 EESQKILKSKTPA 487



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,054,660
Number of extensions: 354924
Number of successful extensions: 825
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 825
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 361
Effective length of database: 8,310,137
Effective search space: 2999959457
Effective search space used: 2999959457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)