BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0281000 Os07g0281000|AK111689
(486 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07360.1 | chr1:2260562-2262795 REVERSE LENGTH=482 588 e-168
AT2G29580.1 | chr2:12652011-12654158 FORWARD LENGTH=484 572 e-163
AT5G07060.1 | chr5:2194394-2195872 REVERSE LENGTH=364 409 e-114
AT5G04210.1 | chr5:1155055-1155724 REVERSE LENGTH=194 98 1e-20
AT1G47490.1 | chr1:17424801-17427182 FORWARD LENGTH=433 61 1e-09
AT1G47500.1 | chr1:17432682-17434805 FORWARD LENGTH=435 61 1e-09
AT1G11650.2 | chr1:3914895-3917941 FORWARD LENGTH=406 51 1e-06
>AT1G07360.1 | chr1:2260562-2262795 REVERSE LENGTH=482
Length = 481
Score = 588 bits (1517), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/387 (71%), Positives = 314/387 (81%), Gaps = 16/387 (4%)
Query: 1 MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60
MAHR+LRD +ADGWERSDFPIICESCLGDNPYVRM +A YDKECKIC RPFTVFRWRPGR
Sbjct: 1 MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60
Query: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120
DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL+ +++D+IP+SDVNREYFAE
Sbjct: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREYFAE 120
Query: 121 EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180
EHDR+ARAG+DY+SS GK R NDTILKLQRT PYYKRNRAHVCSF++RGECTRGAECPYR
Sbjct: 121 EHDRKARAGLDYESSFGKMRPNDTILKLQRTTPYYKRNRAHVCSFFIRGECTRGAECPYR 180
Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT 240
HEMPETGELSQQNIKDRYYGVNDPVA+KLL KAGEM +L PDDESI+TLY+GGL+SR+
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVAMKLLGKAGEMGTLESPDDESIKTLYVGGLNSRIL 240
Query: 241 EQDLRDQFYAHGEIETIRMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGVRLKLMWGK 300
EQD+RDQFYAHGEIE+IR++ +ACAFVTYT+R N+LVI G RLKL WG+
Sbjct: 241 EQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLVINGQRLKLTWGR 300
Query: 301 PQAPKPEEDEAGRQGHVAHGGMLPRAVIXXXXXXXXXXXXXXXXXXXXASASYYFNIPAP 360
PKP++D A +QG VAH G+LPRAVI Y+ P P
Sbjct: 301 ---PKPDQDGANQQGGVAHSGLLPRAVISQQHNQPPPMQQ-------------YYMHPPP 344
Query: 361 PAAERTLYPSMDPQRMGALVESQEGDG 387
++ YPSMDPQRMGA++ +QE G
Sbjct: 345 ANQDKPYYPSMDPQRMGAVISTQEAGG 371
>AT2G29580.1 | chr2:12652011-12654158 FORWARD LENGTH=484
Length = 483
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/381 (71%), Positives = 309/381 (81%), Gaps = 14/381 (3%)
Query: 1 MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60
MAHR+LRD +ADGWERSDFPIICESCLGDNPYVRM +A YDKECKIC RPFTVFRWRPGR
Sbjct: 1 MAHRILRDHEADGWERSDFPIICESCLGDNPYVRMTKANYDKECKICTRPFTVFRWRPGR 60
Query: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120
DARYKKTE+CQTCCKLKNVCQVCLLDLEYGLPVQVRDTAL+ +++D+IP+SDVNRE+FAE
Sbjct: 61 DARYKKTEVCQTCCKLKNVCQVCLLDLEYGLPVQVRDTALNISTHDSIPKSDVNREFFAE 120
Query: 121 EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180
EHDR+ RAG+DY+SS GK R NDTI LQRT PYYKRNRAH+CSF++RGECTRG ECPYR
Sbjct: 121 EHDRKTRAGLDYESSFGKIRPNDTIRMLQRTTPYYKRNRAHICSFFIRGECTRGDECPYR 180
Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT 240
HEMPETGELSQQNIKDRYYGVNDPVALKLL KAGEM +L P+D+SIRTLY+GGL+SRV
Sbjct: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMGTLESPEDQSIRTLYVGGLNSRVL 240
Query: 241 EQDLRDQFYAHGEIETIRMVLQRACAFVTYTTRXXXXXXXXXXXNKLVIKGVRLKLMWGK 300
EQD+RDQFYAHGEIE+IR++ ++ACAFVTYTTR N+LV+ G RLKL WG+
Sbjct: 241 EQDIRDQFYAHGEIESIRILAEKACAFVTYTTREGAEKAAEELSNRLVVNGQRLKLTWGR 300
Query: 301 PQAPKPEEDEAGRQGHVAHGGMLPRAVIXXXXXXXXXXXXXXXXXXXXASASYYF--NIP 358
PQ PKP++D + +QG VAH G+LPRAVI YY P
Sbjct: 301 PQVPKPDQDGSNQQGSVAHSGLLPRAVISQQQNQPPPML------------QYYMHPPPP 348
Query: 359 APPAAERTLYPSMDPQRMGAL 379
PP +R YPSMDPQRMGA+
Sbjct: 349 QPPHQDRPFYPSMDPQRMGAV 369
>AT5G07060.1 | chr5:2194394-2195872 REVERSE LENGTH=364
Length = 363
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 223/262 (85%), Gaps = 3/262 (1%)
Query: 1 MAHRLLRDAQADGWERSDFPIICESCLGDNPYVRMLRAEYDKECKICARPFTVFRWRPGR 60
M+HR D ADGWE +DFPI CESC GDNPY+RM RA+YDKECKIC+RPFT FRWRPGR
Sbjct: 1 MSHR---DHGADGWESADFPITCESCFGDNPYMRMTRADYDKECKICSRPFTAFRWRPGR 57
Query: 61 DARYKKTEICQTCCKLKNVCQVCLLDLEYGLPVQVRDTALSTNSNDAIPRSDVNREYFAE 120
+AR+KKTEICQTC KLKNVCQVCLLDL +GLPVQVRD+AL+ NS+ ++P S VNREYFA+
Sbjct: 58 NARFKKTEICQTCSKLKNVCQVCLLDLGFGLPVQVRDSALNINSHYSVPMSHVNREYFAD 117
Query: 121 EHDRRARAGIDYDSSNGKARANDTILKLQRTAPYYKRNRAHVCSFYVRGECTRGAECPYR 180
EHD + RAG+DY+SS GK + NDTILKLQR P Y++NR +CSFY G+C RGAEC +R
Sbjct: 118 EHDPKTRAGLDYESSFGKMQPNDTILKLQRRTPSYEKNRPKICSFYTIGQCKRGAECSFR 177
Query: 181 HEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVT 240
HEMPETGELS QNI+DRYY VNDPVA+KLL KAGEM +L PP+DESI+TLY+GGL+SR+
Sbjct: 178 HEMPETGELSHQNIRDRYYSVNDPVAMKLLRKAGEMGTLEPPEDESIKTLYVGGLNSRIF 237
Query: 241 EQDLRDQFYAHGEIETIRMVLQ 262
EQD+ D FYA+GE+E+IR++ +
Sbjct: 238 EQDIHDHFYAYGEMESIRVMAE 259
>AT5G04210.1 | chr5:1155055-1155724 REVERSE LENGTH=194
Length = 193
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 162 VCSFYVRG-ECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLSKAGEMPSLT 220
+C + G +CTRG C YRHE+ + ++ G+ +P L++L++A L
Sbjct: 16 ICPLFDAGRQCTRGTMCLYRHEINRGLDCHGRS------GLENPFVLEVLARACNTGPLK 69
Query: 221 PPDDESIRTLYIGGL-DSRVTEQDLRDQFYAHGEIETIRMVLQRA---CAFVTYTTRXXX 276
PP+D+SI+TLYI L +S V EQD+RD F +GEIE+I + R CAF+TYTTR
Sbjct: 70 PPEDQSIKTLYIRRLINSSVLEQDIRDHFCPYGEIESIVIFPHRGGGTCAFLTYTTRLAA 129
Query: 277 XXXXXXXXNKLVIKGVRLKLMWG 299
+ IKG R+KL+WG
Sbjct: 130 EKAMLELSSWTDIKGQRVKLLWG 152
>AT1G47490.1 | chr1:17424801-17427182 FORWARD LENGTH=433
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 212 KAGEMP--SLTPPDDESIRT-LYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFV 268
+ G MP +LT P+ + + T +++GGLDS VT++DL+ F GEI ++++ + + C FV
Sbjct: 285 QGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFV 344
Query: 269 TYTTRXXXXXXXXXXXNKLVIKGVRLKLMWGKPQAPKPEEDEAGRQ 314
+ R N VI ++L WG+ A K D+ G Q
Sbjct: 345 QFVNR-PNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQ 389
>AT1G47500.1 | chr1:17432682-17434805 FORWARD LENGTH=435
Length = 434
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 212 KAGEMPS--LTPPDDESIRT-LYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFV 268
+ G MPS T + ++I T +++GGLDS VT++DL+ F GEI ++++ + + C FV
Sbjct: 287 QGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFV 346
Query: 269 TYTTRXXXXXXXXXXXNKLVIKGVRLKLMWGKPQAPKPEEDEAGRQ 314
+ R N VI ++L WG+ A K D+ G Q
Sbjct: 347 QFVNR-PNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQ 391
>AT1G11650.2 | chr1:3914895-3917941 FORWARD LENGTH=406
Length = 405
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 219 LTPPDDESIRTLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTRXXXXX 278
+T +D + T+++GGLD+ VT+ L++ F +GEI +++ + C FV ++ +
Sbjct: 252 VTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEK-SCAE 310
Query: 279 XXXXXXNKLVIKGVRLKLMWGKPQAPKPEEDEAGRQGHVAHGG 321
N + + G ++L WG+ P ++G +GG
Sbjct: 311 EALRMLNGVQLGGTTVRLSWGR----SPSNKQSGDPSQFYYGG 349
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,251,947
Number of extensions: 314315
Number of successful extensions: 910
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 906
Number of HSP's successfully gapped: 7
Length of query: 486
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 384
Effective length of database: 8,310,137
Effective search space: 3191092608
Effective search space used: 3191092608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)