BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0255200 Os07g0255200|AK062290
         (215 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G28780.1  | chr5:10812907-10814173 REVERSE LENGTH=338          126   8e-30
AT3G51700.1  | chr3:19179443-19181145 REVERSE LENGTH=345          110   7e-25
AT3G51690.1  | chr3:19176731-19178107 REVERSE LENGTH=332          102   2e-22

>AT5G28780.1 | chr5:10812907-10814173 REVERSE LENGTH=338
          Length = 337

 Score =  126 bits (317), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 7/186 (3%)

Query: 36  KGNETDLERLIDTVFPNLNDNLTDPNYITCRAILSTRNEFADRINVKMIERFRWDVMTY- 94
           K N   L+++    +   + +  +  Y+T R IL+  NE+ D IN  M+ +   D   Y 
Sbjct: 88  KHNGNRLQQVTKGAYVQFSVSQPNFQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYL 147

Query: 95  --HSFDRAKDDPHNY---YPPEFLNSLTPNGLPPHVLKLKINCPIMLLRSIDPANGLCNG 149
             +S  +A     +Y   Y  ++LNSL    LP H + LK   PIM +R+ +   GLCNG
Sbjct: 148 SSYSIGKADTIGADYEALYHVKYLNSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNG 207

Query: 150 TRLVVHQFGKNAIDAEIVVGKHAGKRVFLPRIPLCPSDDEMFPFRFKRKQFPVRLSFAFT 209
           TRL+V   G+  I+A+IV G HAGK V +PR  L P   E  PF  +R+QFP+R+ +A T
Sbjct: 208 TRLIVTNLGEQVIEAQIVTGTHAGKMVSIPRFILSPPQSE-HPFTLRRQQFPMRVCYAMT 266

Query: 210 INKAQG 215
           I K QG
Sbjct: 267 IIKNQG 272



>AT3G51700.1 | chr3:19179443-19181145 REVERSE LENGTH=345
          Length = 344

 Score =  110 bits (274), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 18/212 (8%)

Query: 15  GTEEVNK----EGLIGLPSDICVS-CKGNETDLERLIDTVFPNLNDNLTDPNYITCRAIL 69
           G E +NK    E  I +  D+ ++ CK     ++ ++D V+        +P++   RAIL
Sbjct: 68  GGENINKPNDGETKIDIHEDLLITECKD---PIKTIVDEVYGESFTESYNPDFYQERAIL 124

Query: 70  STRNEFADRINVKMIERFRWDVMTYHSFD-----RAKDDPHNYYPPEFLNSLTPNGLPPH 124
              N+ AD IN  M+ + + +    +  D      A  +    YP EFLNS+   G P  
Sbjct: 125 CHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHASPNDKMLYPLEFLNSIKIPGFPDF 184

Query: 125 VLKLKINCPIMLLRSIDPANGLCNGTRLVVHQFGKNAIDAEIVVGKHAGKRVFLPRIPLC 184
            L+LK+  P+MLLR + P   L  GTRL + +     ++A I+ G + G++V +PRI   
Sbjct: 185 KLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVETFVLEAMIITGNNHGEKVLIPRI--- 241

Query: 185 PSD--DEMFPFRFKRKQFPVRLSFAFTINKAQ 214
           PSD  +  FP + +R+QFPV+L+FA TI+++Q
Sbjct: 242 PSDLREAKFPIKMRRRQFPVKLAFAMTIDESQ 273



>AT3G51690.1 | chr3:19176731-19178107 REVERSE LENGTH=332
          Length = 331

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 3/158 (1%)

Query: 59  DPNYITCRAILSTRNEFADRINVKMIERFRWDVMTYHSFDRAKDDPHN--YYPPEFLNSL 116
           +P++    AIL  R++  D+IN  M+     +     S D     P++  + P E LNS+
Sbjct: 113 NPDFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSISPSPNDDMFVPLEVLNSI 172

Query: 117 TPNGLPPHVLKLKINCPIMLLRSIDPANGLCNGTRLVVHQFGKNAIDAEIVVGKHAGKRV 176
              GLP   L+LK+  P+MLLR +DP+ G   GTRL + +     ++A I+ G   GK++
Sbjct: 173 KVPGLPDFKLRLKVGAPVMLLRDLDPSRGFFTGTRLQITRLCGFLLEAMIIAGNKHGKKI 232

Query: 177 FLPRIPLCPSDDEMFPFRFKRKQFPVRLSFAFTINKAQ 214
           ++PRI   P++   FP + +R Q+P++L+FA TI+++Q
Sbjct: 233 WIPRIASYPTETN-FPLQMRRTQYPLKLAFAMTIDESQ 269



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.142    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,336,417
Number of extensions: 238633
Number of successful extensions: 461
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 457
Number of HSP's successfully gapped: 3
Length of query: 215
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 121
Effective length of database: 8,529,465
Effective search space: 1032065265
Effective search space used: 1032065265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 109 (46.6 bits)