BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0233300 Os07g0233300|AK073637
(244 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242 296 5e-81
AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247 289 9e-79
AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251 256 7e-69
AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257 253 5e-68
AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253 251 2e-67
AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261 247 4e-66
AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256 223 7e-59
>AT5G05610.1 | chr5:1677331-1678942 REVERSE LENGTH=242
Length = 241
Score = 296 bits (759), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/243 (61%), Positives = 176/243 (72%), Gaps = 3/243 (1%)
Query: 3 MAAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXX 62
MAA S PRTVE+IFKDFSGRR+G +RAL+VDVD+FY CDPE ENLCLYGHPNG W
Sbjct: 1 MAAE-SSNPRTVEEIFKDFSGRRSGFLRALSVDVDKFYSLCDPEMENLCLYGHPNGTWEV 59
Query: 63 XXXXXXXXXXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNERKR 122
GINFARDGM R+DWLSLVAVHSD WLLSV+ +FGARLN NERKR
Sbjct: 60 NLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSSYFGARLNRNERKR 119
Query: 123 LFSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGKRANDVQTK-TSRPAVVDDGYD 181
LFSLIND PT+ E ++ RK +D K D GSKSR+ KR+ + QTK T + +
Sbjct: 120 LFSLINDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVKRSIEGQTKSTPKLMEESYEDE 179
Query: 182 EEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSKK 241
++EH +TLCG+CGG Y +EFWI CD+CERW+HGKCV+ITPAKAE IK YKCP C +KK
Sbjct: 180 DDEHGDTLCGSCGGNYTNDEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPSC-CTKK 238
Query: 242 SRQ 244
RQ
Sbjct: 239 GRQ 241
>AT3G11200.1 | chr3:3508387-3510418 REVERSE LENGTH=247
Length = 246
Score = 289 bits (739), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 182/245 (74%), Gaps = 5/245 (2%)
Query: 4 AAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXXX 63
AA VS PRTVE+IFKD+S RRA L+RALT DVD+FY CDPEKENLCLYGHPN W
Sbjct: 3 AAAVSSNPRTVEEIFKDYSARRAALLRALTKDVDDFYSQCDPEKENLCLYGHPNESWEVN 62
Query: 64 XXXXXXXXXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNERKRL 123
GINFARDGM R+DWLSLVAVHSD WLLSV+F+FGARLN NERKRL
Sbjct: 63 LPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRL 122
Query: 124 FSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGKRANDVQTKTSRPAVV----DDG 179
FSLIND PT+ + ++ RK +DNK +D+GSKSR+ KR+ D QTK+S P ++ ++
Sbjct: 123 FSLINDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEE 182
Query: 180 YDEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSS 239
+E+EH +TLCG+CGG Y EFWI CD+CERW+HGKCV+ITPAKAE IK YKCP C +
Sbjct: 183 EEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPC-CA 241
Query: 240 KKSRQ 244
KK RQ
Sbjct: 242 KKGRQ 246
>AT3G42790.1 | chr3:14878128-14879618 REVERSE LENGTH=251
Length = 250
Score = 256 bits (654), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 162/238 (68%), Gaps = 8/238 (3%)
Query: 11 PRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXXXXXXXXXX 70
PRTVE++FKDF GRR +V+ALT DV EFY CDPEKENLCLYG PN W
Sbjct: 10 PRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWEVNLPAEEVP 69
Query: 71 XXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLN--GNERKRLFSLIN 128
GINFARDG+ ++WLSLVA+HSD+WLLSV+F+FG+R + ERKRLF++IN
Sbjct: 70 PELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEERKRLFNMIN 129
Query: 129 DHPTVLEALSDRKHGRDNKSGAD-NGSKSRHSGK--RANDVQTKTSRP---AVVDDGYDE 182
D PT+ E ++ +D S A+ NG+KS+ + K + +KT +P D DE
Sbjct: 130 DVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDE 189
Query: 183 EEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSK 240
++H ETLCG CG A+EFWI CD+CE+WFHGKCV+ITPA+AEHIK YKCP CS+ +
Sbjct: 190 DDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 247
>AT2G02470.1 | chr2:652837-654621 FORWARD LENGTH=257
Length = 256
Score = 253 bits (647), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/253 (50%), Positives = 158/253 (62%), Gaps = 15/253 (5%)
Query: 3 MAAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXX 62
M P PRTVE++F DF GRRAGL++ALT D+ +FY CDPEKENLCLYG PN W
Sbjct: 1 MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60
Query: 63 XXXXXXXXXXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLN--GNER 120
GINFARDGM +DW+SLVAVHSDSWLLSVAF+FGAR NER
Sbjct: 61 NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120
Query: 121 KRLFSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGKRANDVQT-----KTSRP-- 173
KRLF +IN+ PT+ E +S + S +N SKS+ SG ++ ++ K S P
Sbjct: 121 KRLFQMINELPTIFEVVSGNAKQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPPP 180
Query: 174 ------AVVDDGYDEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEH 227
+ E++ +CG CG Y +EFWI CD CE+WFHGKCV+ITPAKAEH
Sbjct: 181 KEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAEH 240
Query: 228 IKHYKCPDCSSSK 240
IKHYKCP CS+ +
Sbjct: 241 IKHYKCPTCSNKR 253
>AT1G14510.1 | chr1:4962171-4964154 REVERSE LENGTH=253
Length = 252
Score = 251 bits (642), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/245 (53%), Positives = 160/245 (65%), Gaps = 10/245 (4%)
Query: 9 PAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXXXXXXXX 68
P PRTVE++F DF GRRAGL++AL+ DV +FY CDPEKENLCLYG PN W
Sbjct: 7 PIPRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEE 66
Query: 69 XXXXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLN--GNERKRLFSL 126
GINFARDGM +DW+SLVAVHSDSWL+SVAF+FGAR NERKRLF +
Sbjct: 67 VPPELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQM 126
Query: 127 INDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGK--RANDVQTKTS------RPAVVDD 178
IND PT+ E ++ ++S N S+S+ SG R ++ TK S R
Sbjct: 127 INDLPTIFEVVTGNAKQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESG 186
Query: 179 GYDEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSS 238
DE++ +CG CG Y +EFWI CD CE+WFHGKCV+ITPAKAEHIKHYKCP C++
Sbjct: 187 DEDEDDEQGAVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTT 246
Query: 239 SKKSR 243
SKK +
Sbjct: 247 SKKMK 251
>AT5G20510.1 | chr5:6939991-6942846 REVERSE LENGTH=261
Length = 260
Score = 247 bits (631), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/249 (48%), Positives = 165/249 (66%), Gaps = 18/249 (7%)
Query: 10 APRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXXXXXXXXX 69
+PRTVE++F+DF GRRAG+++ALT DV++F+ CDPEK+NLCLYG PN W
Sbjct: 9 SPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWEVNLPAEEV 68
Query: 70 XXXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGN--ERKRLFSLI 127
GINFARDGM R+WLSLVAVHSD+WLLSV+F+FG+R + +RKRLFS+I
Sbjct: 69 PPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRADRKRLFSMI 128
Query: 128 NDHPTVLEALSD--RKHGRDNKSGADNGSKSRHSGKRANDVQTKTSRP------------ 173
N+ PTV E ++ K ++ S A+ S + +++K+S+
Sbjct: 129 NEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRGLESKSSKTIHAKDEEEGLEL 188
Query: 174 --AVVDDGYDEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHY 231
++ DE+EH ETLCG CG Y ++EFWI CD+CE+WFHG+CV+ITPA+AEHIKHY
Sbjct: 189 EEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITPARAEHIKHY 248
Query: 232 KCPDCSSSK 240
KCP CS+ +
Sbjct: 249 KCPTCSNKR 257
>AT5G26210.1 | chr5:9158566-9160221 REVERSE LENGTH=256
Length = 255
Score = 223 bits (568), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 160/244 (65%), Gaps = 14/244 (5%)
Query: 11 PRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRWXXXXXXXXXX 70
PRTVE++F+DF GRRAG+++ALT DV EF+ CDPEKENLCLYGHPN W
Sbjct: 9 PRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEVNLPAEEVP 68
Query: 71 XXXXXXXXGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGN--ERKRLFSLIN 128
GINFARDGM +DWLSLVAVHSD+WLL+VAFFFGAR + +RKRLF+++N
Sbjct: 69 PELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADRKRLFNMVN 128
Query: 129 DHPTVLEAL--SDRKHGRDNKSGADNGSKSRHSGKRANDVQ-TKTSRP---------AVV 176
D PT+ E + + +K G+D S ++N S S + K S+P
Sbjct: 129 DLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKDDEEEEEEG 188
Query: 177 DDGYDEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDC 236
+ DE+E ET CG CG Y A+EFWI CD+CE WFHGKCV+ITPA+AEHIK YKCP C
Sbjct: 189 VEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSC 248
Query: 237 SSSK 240
S+ +
Sbjct: 249 SNKR 252
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,774,397
Number of extensions: 241760
Number of successful extensions: 872
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 856
Number of HSP's successfully gapped: 8
Length of query: 244
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 148
Effective length of database: 8,474,633
Effective search space: 1254245684
Effective search space used: 1254245684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)