BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0200700 Os07g0200700|AK063341
         (410 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34640.1  | chr4:16538489-16541655 FORWARD LENGTH=411          547   e-156
AT4G34650.1  | chr4:16542377-16544915 FORWARD LENGTH=414          508   e-144

>AT4G34640.1 | chr4:16538489-16541655 FORWARD LENGTH=411
          Length = 410

 Score =  547 bits (1409), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 255/345 (73%), Positives = 296/345 (85%), Gaps = 2/345 (0%)

Query: 36  DEHWAFAYSMLHRVSRSFAIVIQQLGPDLRNAVCVFYLVLRALDTVEDDTSIPTEIKVPI 95
           + HW F YSMLH+VSRSF++VIQQL  +LRNAVCVFYLVLRALDTVEDDTSIPT+ KVPI
Sbjct: 34  EPHWGFCYSMLHKVSRSFSLVIQQLNTELRNAVCVFYLVLRALDTVEDDTSIPTDEKVPI 93

Query: 96  LQEFHRHIYNRDWHFSCGTKDCKILMDKFHYVLTAFLELGSGYQEAIEEITRRMGAGMAK 155
           L  FHRHIY+ DWH+SCGTK+ KILMD+FH+V  AFLEL  GYQEAIEEITRRMGAGMAK
Sbjct: 94  LIAFHRHIYDTDWHYSCGTKEYKILMDQFHHVSAAFLELEKGYQEAIEEITRRMGAGMAK 153

Query: 156 FICKEVETVDDYDEYCHYVAGLVGIGLSRLFHAAGLEDLAP--ESLSNSMGLFLQKVNIT 213
           FIC+EVETVDDYDEYCHYVAGLVG+GLS+LF AAG E L P  E++SNSMGLFLQK NI 
Sbjct: 154 FICQEVETVDDYDEYCHYVAGLVGLGLSKLFLAAGSEVLTPDWEAISNSMGLFLQKTNII 213

Query: 214 RDYLEDINEIPKSRMFWPREIWSKYVDKLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCL 273
           RDYLEDINEIPKSRMFWPREIW KY DKLEDLKYE N+ K+V+CLNEMVTN L+H EDCL
Sbjct: 214 RDYLEDINEIPKSRMFWPREIWGKYADKLEDLKYEENTNKSVQCLNEMVTNALMHIEDCL 273

Query: 274 RYMSALKDITILRFCAIPQVMALATYALCYNNVNVFRGVVKLRRGLTARIINETNSMADV 333
           +YM +L+D +I RFCAIPQ+MA+ T ALCYNN  VFRGVVKLRRGLTA++I+ T +MADV
Sbjct: 274 KYMVSLRDPSIFRFCAIPQIMAIGTLALCYNNEQVFRGVVKLRRGLTAKVIDRTKTMADV 333

Query: 334 YTAFYEFSSLLAEKIDDNDPNASLTRKRVNAIKETCKSSGLLKIR 378
           Y AFY+FS +L  K+D NDPNAS T  R+ A+++ C+ +G+L+ R
Sbjct: 334 YGAFYDFSCMLKTKVDKNDPNASKTLNRLEAVQKLCRDAGVLQNR 378



>AT4G34650.1 | chr4:16542377-16544915 FORWARD LENGTH=414
          Length = 413

 Score =  508 bits (1307), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 236/345 (68%), Positives = 284/345 (82%), Gaps = 2/345 (0%)

Query: 36  DEHWAFAYSMLHRVSRSFAIVIQQLGPDLRNAVCVFYLVLRALDTVEDDTSIPTEIKVPI 95
           + H AF YS+LH+VS+SF++VIQQLG +LRNAVCVFYL+LRALDTVEDDTS+P EIKVPI
Sbjct: 34  EPHLAFCYSILHKVSKSFSLVIQQLGTELRNAVCVFYLILRALDTVEDDTSVPVEIKVPI 93

Query: 96  LQEFHRHIYNRDWHFSCGTKDCKILMDKFHYVLTAFLELGSGYQEAIEEITRRMGAGMAK 155
           L  FHRHIY+ DWHFSCGTK+ K+LMD+FH+V  AFL+L  GYQEAIE+IT+RMGAGMAK
Sbjct: 94  LIAFHRHIYDGDWHFSCGTKEYKLLMDQFHHVSAAFLKLEKGYQEAIEDITKRMGAGMAK 153

Query: 156 FICKEVETVDDYDEYCHYVAGLVGIGLSRLFHAAGLEDLAPE--SLSNSMGLFLQKVNIT 213
           FICKEVET+DDYDEYCHY AGLVG+GLS++F A+ LE L P+   +SNS GLFLQK NI 
Sbjct: 154 FICKEVETIDDYDEYCHYAAGLVGLGLSKIFIASELEILTPDWKQISNSTGLFLQKTNII 213

Query: 214 RDYLEDINEIPKSRMFWPREIWSKYVDKLEDLKYENNSVKAVKCLNEMVTNGLIHTEDCL 273
           +DYLEDINE PKSRMFWPREIW KYVDKLED K E  + KAV+CLNEMVTN L H EDCL
Sbjct: 214 KDYLEDINERPKSRMFWPREIWGKYVDKLEDFKNEEKATKAVQCLNEMVTNALNHVEDCL 273

Query: 274 RYMSALKDITILRFCAIPQVMALATYALCYNNVNVFRGVVKLRRGLTARIINETNSMADV 333
           + +++L+D  I + CAIPQ++A+ T ALCYNNV VFRGVV+LRRGL A++I+ T +M DV
Sbjct: 274 KSLASLRDPAIFQSCAIPQIVAIGTLALCYNNVQVFRGVVRLRRGLIAKVIDRTKTMDDV 333

Query: 334 YTAFYEFSSLLAEKIDDNDPNASLTRKRVNAIKETCKSSGLLKIR 378
           Y AFY+FS +L  K+D+NDPNA  T  R+  IK+ CK +G L  R
Sbjct: 334 YGAFYDFSCMLQTKVDNNDPNAMKTLNRLETIKKFCKENGGLHKR 378



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.138    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,880,044
Number of extensions: 322686
Number of successful extensions: 783
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 781
Number of HSP's successfully gapped: 2
Length of query: 410
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 309
Effective length of database: 8,337,553
Effective search space: 2576303877
Effective search space used: 2576303877
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)