BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0194500 Os07g0194500|AK121816
(319 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289 350 4e-97
AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299 340 7e-94
AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300 337 7e-93
AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325 335 3e-92
AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288 233 1e-61
AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290 233 1e-61
AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291 232 2e-61
AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292 223 1e-58
AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284 202 3e-52
AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292 188 3e-48
AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273 163 9e-41
AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275 159 2e-39
AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289 153 1e-37
>AT3G28490.1 | chr3:10679150-10680654 REVERSE LENGTH=289
Length = 288
Score = 350 bits (899), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 205/264 (77%), Gaps = 6/264 (2%)
Query: 55 SRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMV-ADNKSGKSVMSEVRTSSGM 113
+R+ +SW PR F+YKGFLSD+ECDHL+KL K K+++SMV AD SG+S SEVRTSSGM
Sbjct: 30 TRITQLSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESEDSEVRTSSGM 89
Query: 114 FLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGH 173
FL KRQD +V+ +E ++AAWTFLPEEN E +QIL YE+GQKY+PHFDYF+DK LGGH
Sbjct: 90 FLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGH 149
Query: 174 RYATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHI 233
R ATVLMYLS V KGGETVFPN +G Q KDD++S+CA++G AVKP KGD +LFF+LH+
Sbjct: 150 RIATVLMYLSNVTKGGETVFPNWKGKTPQLKDDSWSKCAKQGYAVKPRKGDALLFFNLHL 209
Query: 234 DGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNSARCAKWAEAGEC 293
+G DP SLHGSCPVIEGEKWSA +WI +RS+ + C D+ C +WA+AGEC
Sbjct: 210 NGTTDPNSLHGSCPVIEGEKWSATRWIHVRSFGKKKLV-----CVDDHESCQEWADAGEC 264
Query: 294 EKNPVYMVGAEGLPGNCRKSCGVC 317
EKNP+YMVG+E G CRKSC C
Sbjct: 265 EKNPMYMVGSETSLGFCRKSCKAC 288
>AT5G18900.1 | chr5:6304409-6306166 REVERSE LENGTH=299
Length = 298
Score = 340 bits (871), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 162/269 (60%), Positives = 202/269 (75%), Gaps = 7/269 (2%)
Query: 53 NASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSG 112
N S+V+ VS +PR FVY+GFL++ ECDH+V L K ++RS VADN SG+S SEVRTSSG
Sbjct: 33 NPSKVKQVSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVRTSSG 92
Query: 113 MFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGG 172
F+ K +DP+VS IE +I+ WTFLP+EN E+IQ+LRYEHGQKY+ HFDYFHDKVN GG
Sbjct: 93 TFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGG 152
Query: 173 HRYATVLMYLSTVEKGGETVFPNAE----GWENQPKDDTFSECAQKGLAVKPVKGDTVLF 228
HR AT+LMYLS V KGGETVFP+AE ++ K+D S+CA++G+AVKP KGD +LF
Sbjct: 153 HRMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKED-LSDCAKRGIAVKPRKGDALLF 211
Query: 229 FSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNSARCAKWA 288
F+LH D +PDPLSLHG CPVIEGEKWSA KWI + S++ + + C+D + C +WA
Sbjct: 212 FNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSFDR--IVTPSGNCTDMNESCERWA 269
Query: 289 EAGECEKNPVYMVGAEGLPGNCRKSCGVC 317
GEC KNP YMVG LPG CR+SC C
Sbjct: 270 VLGECTKNPEYMVGTTELPGYCRRSCKAC 298
>AT3G06300.1 | chr3:1907744-1909675 FORWARD LENGTH=300
Length = 299
Score = 337 bits (863), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 157/266 (59%), Positives = 201/266 (75%), Gaps = 7/266 (2%)
Query: 56 RVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFL 115
+V+ VS +PR FVY+GFL+D ECDHL+ L K +QRS VADN +G+S +S+VRTSSG F+
Sbjct: 37 KVKQVSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFI 96
Query: 116 DKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRY 175
K +DP+VS IE +++ WTFLP+EN E++Q+LRYEHGQKY+ HFDYFHDKVN A GGHR
Sbjct: 97 SKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRI 156
Query: 176 ATVLMYLSTVEKGGETVFPNAEGWE----NQPKDDTFSECAQKGLAVKPVKGDTVLFFSL 231
ATVL+YLS V KGGETVFP+A+ + ++ KDD S+CA+KG+AVKP KG+ +LFF+L
Sbjct: 157 ATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDD-LSDCAKKGIAVKPKKGNALLFFNL 215
Query: 232 HIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNSARCAKWAEAG 291
D +PDP SLHG CPVIEGEKWSA KWI + S++ + C+D + C +WA G
Sbjct: 216 QQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSFD--KILTHDGNCTDVNESCERWAVLG 273
Query: 292 ECEKNPVYMVGAEGLPGNCRKSCGVC 317
EC KNP YMVG +PGNCR+SC C
Sbjct: 274 ECGKNPEYMVGTPEIPGNCRRSCKAC 299
>AT3G28480.2 | chr3:10676266-10678262 REVERSE LENGTH=325
Length = 324
Score = 335 bits (858), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/276 (58%), Positives = 202/276 (73%), Gaps = 10/276 (3%)
Query: 52 FNASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSE----V 107
F+ +RV +SW PRVF+Y+GFLSD+ECDH +KL K K+++SMVADN SG+SV SE V
Sbjct: 51 FDPTRVTQLSWTPRVFLYEGFLSDEECDHFIKLAKGKLEKSMVADNDSGESVESEDSVSV 110
Query: 108 RTSSGMFLDKRQ----DPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFH 163
S F+ D +VS +E ++AAWTFLPEEN E++QIL YE+GQKYEPHFDYFH
Sbjct: 111 VRQSSSFIANMDSLEIDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFH 170
Query: 164 DKVNQALGGHRYATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKG 223
D+ N LGGHR ATVLMYLS VEKGGETVFP +G Q KDD+++ECA++G AVKP KG
Sbjct: 171 DQANLELGGHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAKQGYAVKPRKG 230
Query: 224 DTVLFFSLHIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEGCSDNSAR 283
D +LFF+LH + D SLHGSCPV+EGEKWSA +WI ++S+E + GC D +
Sbjct: 231 DALLFFNLHPNATTDSNSLHGSCPVVEGEKWSATRWIHVKSFERAFNKQ--SGCMDENVS 288
Query: 284 CAKWAEAGECEKNPVYMVGAEGLPGNCRKSCGVCDS 319
C KWA+AGEC+KNP YMVG++ G CRKSC C S
Sbjct: 289 CEKWAKAGECQKNPTYMVGSDKDHGYCRKSCKACSS 324
>AT1G20270.1 | chr1:7021383-7022923 REVERSE LENGTH=288
Length = 287
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 146/209 (69%), Gaps = 1/209 (0%)
Query: 59 AVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFLDKR 118
+SW PR FVY FLS +EC++L+ L K M +S V D+++GKS S VRTSSG FL +
Sbjct: 78 VLSWEPRAFVYHNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRG 137
Query: 119 QDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRYATV 178
+D ++ IEKRIA +TF+P ++ E +Q+L YE GQKYEPH+DYF D+ N GG R AT+
Sbjct: 138 RDKIIKTIEKRIADYTFIPADHGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATM 197
Query: 179 LMYLSTVEKGGETVFPNAE-GWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHIDGVP 237
LMYLS VE+GGETVFP A + + P + SEC +KGL+VKP GD +LF+S+ D
Sbjct: 198 LMYLSDVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATL 257
Query: 238 DPLSLHGSCPVIEGEKWSAPKWIRIRSYE 266
DP SLHG CPVI G KWS+ KW+ + Y+
Sbjct: 258 DPTSLHGGCPVIRGNKWSSTKWMHVGEYK 286
>AT5G66060.1 | chr5:26419481-26421118 FORWARD LENGTH=290
Length = 289
Score = 233 bits (593), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 53 NASRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSG 112
N V +SW PR VY FL+ +EC +L++L K M++S V D K+GKS S VRTSSG
Sbjct: 74 NERWVEIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSG 133
Query: 113 MFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGG 172
FL + +D + IEKRI+ +TF+P E+ E +Q+L YE GQKYEPH+DYF D+ N GG
Sbjct: 134 TFLARGRDKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGG 193
Query: 173 HRYATVLMYLSTVEKGGETVFPNAEG-WENQPKDDTFSECAQKGLAVKPVKGDTVLFFSL 231
R ATVLMYLS VE+GGETVFP A+G + P + SEC + GL+VKP GD +LF+S+
Sbjct: 194 QRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSM 253
Query: 232 HIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYE 266
D DP SLHG C VI+G KWS+ KW+R+ Y+
Sbjct: 254 TPDATLDPSSLHGGCAVIKGNKWSSTKWLRVHEYK 288
>AT4G35810.1 | chr4:16968921-16970358 FORWARD LENGTH=291
Length = 290
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 145/210 (69%), Gaps = 1/210 (0%)
Query: 57 VRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFLD 116
+ +SW PR FVY FL+++EC+HL+ L K M +S V D K+GKS+ S VRTSSG FL+
Sbjct: 80 LEVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLN 139
Query: 117 KRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRYA 176
+ D +V IE RI+ +TF+P EN E +Q+L YE GQ+YEPH DYF D+ N GG R A
Sbjct: 140 RGHDEIVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDYFFDEFNVRKGGQRIA 199
Query: 177 TVLMYLSTVEKGGETVFPNAEG-WENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHIDG 235
TVLMYLS V++GGETVFP A+G + P D S+C ++GL+V P K D +LF+S+ D
Sbjct: 200 TVLMYLSDVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFWSMKPDA 259
Query: 236 VPDPLSLHGSCPVIEGEKWSAPKWIRIRSY 265
DP SLHG CPVI+G KWS+ KW + Y
Sbjct: 260 SLDPSSLHGGCPVIKGNKWSSTKWFHVHEY 289
>AT2G17720.1 | chr2:7697513-7699174 FORWARD LENGTH=292
Length = 291
Score = 223 bits (567), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 142/216 (65%), Gaps = 11/216 (5%)
Query: 57 VRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFLD 116
V +SW PR VY FL+++EC+HL+ L K M +S V D K+G S S VRTSSG FL
Sbjct: 80 VEVISWEPRAVVYHNFLTNEECEHLISLAKPSMVKSTVVDEKTGGSKDSRVRTSSGTFLR 139
Query: 117 KRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRYA 176
+ D VV IEKRI+ +TF+P EN E +Q+L Y+ GQKYEPH+DYF D+ N GG R A
Sbjct: 140 RGHDEVVEVIEKRISDFTFIPVENGEGLQVLHYQVGQKYEPHYDYFLDEFNTKNGGQRIA 199
Query: 177 TVLMYLSTVEKGGETVFPNAEG------WENQPKDDTFSECAQKGLAVKPVKGDTVLFFS 230
TVLMYLS V+ GGETVFP A G W N+ S+C ++GL+V P K D +LF++
Sbjct: 200 TVLMYLSDVDDGGETVFPAARGNISAVPWWNE-----LSKCGKEGLSVLPKKRDALLFWN 254
Query: 231 LHIDGVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYE 266
+ D DP SLHG CPV++G KWS+ KW + ++
Sbjct: 255 MRPDASLDPSSLHGGCPVVKGNKWSSTKWFHVHEFK 290
>AT2G43080.1 | chr2:17915755-17918599 FORWARD LENGTH=284
Length = 283
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 59 AVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFLD-- 116
VSW PR+ V FLS +EC++L + + ++Q S V D K+GK V S+VRTSSGMFL
Sbjct: 79 VVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVRTSSGMFLTHV 138
Query: 117 KRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRYA 176
+R P++ IEKRIA ++ +P EN E IQ+LRYE Q Y+PH DYF D N GG R A
Sbjct: 139 ERSYPIIQAIEKRIAVFSQVPAENGELIQVLRYEPQQFYKPHHDYFADTFNLKRGGQRVA 198
Query: 177 TVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHIDGV 236
T+LMYL+ +GGET FP A D T KG++VKP KGD VLF+S+ +DG
Sbjct: 199 TMLMYLTDDVEGGETYFPLA-----GDGDCTCGGKIMKGISVKPTKGDAVLFWSMGLDGQ 253
Query: 237 PDPLSLHGSCPVIEGEKWSAPKWIR 261
DP S+HG C V+ GEKWSA KW+R
Sbjct: 254 SDPRSIHGGCEVLSGEKWSATKWMR 278
>AT4G25600.1 | chr4:13060712-13062359 FORWARD LENGTH=292
Length = 291
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 153/265 (57%), Gaps = 32/265 (12%)
Query: 55 SRVRAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMF 114
+RV +SW PRVF+Y+GFLS++ECDHL+ L RK + + + GK+ +
Sbjct: 57 TRVLQLSWLPRVFLYRGFLSEEECDHLISL--RKETTEVYSVDADGKTQL---------- 104
Query: 115 LDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHR 174
DPVV+ IE++++AWTFLP EN +I++ Y +K DYF ++ + L
Sbjct: 105 -----DPVVAGIEEKVSAWTFLPGENGGSIKVRSYTS-EKSGKKLDYFGEEPSSVLHESL 158
Query: 175 YATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHID 234
ATV++YLS +GGE +FPN+E +PK+ C + G ++PVKG+ +LFF+ ++
Sbjct: 159 LATVVLYLSNTTQGGELLFPNSE---MKPKNS----CLEGGNILRPVKGNAILFFTRLLN 211
Query: 235 GVPDPLSLHGSCPVIEGEKWSAPKWIRIRSYEHPPVSKVTEG--CSDNSARCAKWAEAGE 292
D S H CPV++GE A K I + +++ E CSD C +WA+ GE
Sbjct: 212 ASLDGKSTHLRCPVVKGELLVATKLIYAKKQ-----ARIEESGECSDEDENCGRWAKLGE 266
Query: 293 CEKNPVYMVGAEGLPGNCRKSCGVC 317
C+KNPVYM+G+ G CRKSC C
Sbjct: 267 CKKNPVYMIGSPDYYGTCRKSCNAC 291
>AT4G35820.1 | chr4:16971221-16972429 FORWARD LENGTH=273
Length = 272
Score = 163 bits (413), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 118/196 (60%), Gaps = 29/196 (14%)
Query: 57 VRAVSWRPRVFVYKGFL--------SDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVR 108
+ ++ PR FVY FL +++ECDHL+ L K M RS V + +G S R
Sbjct: 88 LEVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSR 147
Query: 109 TSSGMFLDKRQDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQ 168
TSSG F+ D +V IEKRI+ +TF+P+EN E +Q++ YE GQK+EPHFD
Sbjct: 148 TSSGTFIRSGHDKIVKEIEKRISEFTFIPQENGETLQVINYEVGQKFEPHFD-------- 199
Query: 169 ALGGHRYATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLF 228
G R ATVLMYLS V+KGGETVFP A+G + ++KG++V+P KGD +LF
Sbjct: 200 --GFQRIATVLMYLSDVDKGGETVFPEAKGIK-----------SKKGVSVRPKKGDALLF 246
Query: 229 FSLHIDGVPDPLSLHG 244
+S+ DG DP S HG
Sbjct: 247 WSMRPDGSRDPSSKHG 262
>AT2G23096.1 | chr2:9834766-9836235 REVERSE LENGTH=275
Length = 274
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Query: 59 AVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSEVRTSSGMFLDKR 118
+SW PRVF F + +C+ ++ + K K++ S +A K + ++ S D+
Sbjct: 70 GLSWNPRVFYLPNFATKQQCEAVIDMAKPKLKPSTLALRKGETAETTQNYRSLHQHTDED 129
Query: 119 QDPVVSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHRYATV 178
+ V++ IE++IA T P++ E+ ILRY+ GQKY+ H+D FH L R T
Sbjct: 130 ESGVLAAIEEKIALATRFPKDYYESFNILRYQLGQKYDSHYDAFHSAEYGPLISQRVVTF 189
Query: 179 LMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHIDGVPD 238
L++LS+VE+GGET+FP G + D + +C GL VKP +GD + F++L +G D
Sbjct: 190 LLFLSSVEEGGETMFPFENGRNMNGRYD-YEKCV--GLKVKPRQGDAIFFYNLFPNGTID 246
Query: 239 PLSLHGSCPVIEGEKWSAPKWIRIRSYE 266
SLHGSCPVI+GEKW A KWIR ++Y+
Sbjct: 247 QTSLHGSCPVIKGEKWVATKWIRDQTYD 274
>AT4G33910.1 | chr4:16256943-16258614 REVERSE LENGTH=289
Length = 288
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 121/207 (58%), Gaps = 6/207 (2%)
Query: 58 RAVSWRPRVFVYKGFLSDDECDHLVKLGKRKMQRSMVADNKSGKSVMSE-VRTSSGMFLD 116
+ +SWRPR + F + ++C +++ K ++ S +A K + ++ RTSSG F+
Sbjct: 79 QVLSWRPRAIYFPNFATAEQCQAIIERAKVNLKPSALALRKGETAENTKGTRTSSGTFIS 138
Query: 117 KRQDPV--VSRIEKRIAAWTFLPEENAENIQILRYEHGQKYEPHFDYFHDKVNQALGGHR 174
++ + +E++IA T +P + E+ ILRYE GQKY+ H+D F+ R
Sbjct: 139 ASEESTGALDFVERKIARATMIPRSHGESFNILRYELGQKYDSHYDVFNPTEYGPQSSQR 198
Query: 175 YATVLMYLSTVEKGGETVFPNAEGWENQPKDDTFSECAQKGLAVKPVKGDTVLFFSLHID 234
A+ L+YLS VE+GGET+FP G N + +C GL VKP KGD +LF+S+ +
Sbjct: 199 IASFLLYLSDVEEGGETMFPFENG-SNMGIGYDYKQCI--GLKVKPRKGDGLLFYSVFPN 255
Query: 235 GVPDPLSLHGSCPVIEGEKWSAPKWIR 261
G D SLHGSCPV +GEKW A KWIR
Sbjct: 256 GTIDQTSLHGSCPVTKGEKWVATKWIR 282
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.134 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,602,742
Number of extensions: 280370
Number of successful extensions: 652
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 628
Number of HSP's successfully gapped: 13
Length of query: 319
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 220
Effective length of database: 8,392,385
Effective search space: 1846324700
Effective search space used: 1846324700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)