BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0193600 Os07g0193600|AK070547
         (592 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G18950.1  | chr1:6546539-6551549 FORWARD LENGTH=751            455   e-128
AT5G25580.1  | chr5:8903550-8906108 FORWARD LENGTH=406            189   3e-48

>AT1G18950.1 | chr1:6546539-6551549 FORWARD LENGTH=751
          Length = 750

 Score =  455 bits (1171), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 281/621 (45%), Positives = 358/621 (57%), Gaps = 67/621 (10%)

Query: 2   ALITPNSTLDDVHMPLLKSIPPVTRMAMGRGTWVTVLCRKLRDWWHWVAEGDIPIVASHG 61
           AL+TPN TL D+H+PLLK+IPPVTRMA+ R TWVTVLCRK+RD WHWVAEGD+PIVA  G
Sbjct: 167 ALLTPNDTLSDIHIPLLKAIPPVTRMALTRDTWVTVLCRKIRDCWHWVAEGDLPIVALQG 226

Query: 62  TEIEAYKVLEPATRLIILKAICDIRVEQEDIRNFIDSSLKHGYDLSTFRKERIGGDAYGI 121
            EIE YK L+PA R++ILKA+CDIRVEQEDIR++ID+SLK G  LS FRK+R+GGD++G+
Sbjct: 227 REIEVYKNLDPAIRVVILKALCDIRVEQEDIRSYIDNSLKTGVHLSVFRKDRVGGDSHGV 286

Query: 122 SYWYEDDPILGHRLYREIRRVEQLKKEPGKRSRGKGGSIILPVVSYQWETVASNFDEFDD 181
           ++WYE+DP++GHRLYREIR+ E LK +         GS ILP ++YQWETVA+NFDEF D
Sbjct: 287 NFWYEEDPLIGHRLYREIRKAEVLKVK-------TKGSKILPNITYQWETVATNFDEFQD 339

Query: 182 VAEKLFSSRNRTEANLGKKLKIEYLPDIEKIHXXXXXXXXXXXXXALLIDSFLAPDGFTT 241
           V+EKL  S +R E +LGKKL  + LP+IEK H             ALL+D+F+  DG   
Sbjct: 340 VSEKLLQSSSRIEVSLGKKLVKDMLPEIEKEHKRKEKLLKKQHRQALLLDNFVVVDGL-A 398

Query: 242 GRSLRDRKPVTYTFDEYDRSISEAIKITKKGENSAEPAAPANRRILTPRPEASSNGK-VN 300
           GRSLRDRKPV YTFD+YD+SI++AIKITKK   S  P  P +RR  + R +A +NG+  +
Sbjct: 399 GRSLRDRKPVRYTFDDYDKSINDAIKITKKKHPS--PEHPLHRR-ESARLDALANGRSTS 455

Query: 301 GLSPTTNEYDGNSSKSDDYRDSD--GEEESETLDXXXXXXXXXXXXXXDFVEAVSDIDPN 358
              PT    D  S +S D+ D D   E   E+LD              DFVE VSD +  
Sbjct: 456 STHPTEPVNDTASGRSSDFADYDDFDEHRDESLD-RRRRQRPQRYSATDFVETVSDNEVE 514

Query: 359 FDSDDEIMGEAVYDEEYLRTRKQQKTSXXX-------------XXXXXXXXXXXXXXXXX 405
           F SDD+I GEAVYDEEYL+ RKQ+K S                                 
Sbjct: 515 FQSDDDIYGEAVYDEEYLKKRKQKKLSSGSEGDEEKGDEEYKWDEDNAEYEEEEEEEEEE 574

Query: 406 XXXXXXXXXXXXPQQRKKLQTRGRRGAKLRS-VDEIQTGLRRSKRSSRQRINYQQYDYSD 464
                       P++ KK+    RR  KLRS  ++ + GLRRSKR++  RI+YQQY++SD
Sbjct: 575 DSLSASEEDSDEPRRAKKMP---RRETKLRSRSNDFRPGLRRSKRAT--RIDYQQYEFSD 629

Query: 465 TDTEG-GKEGKSDASDPDAGFD---------AENDTXXXXXXXXXXXXXXXXXXXXKDNS 514
           +D E  G   +    +PD   D            D+                     DN+
Sbjct: 630 SDKEATGLAKRKRFVEPDEPSDETGNGDFTMGSQDSEENANDPETKSGEEEEPRDVNDNA 689

Query: 515 DDNKMDEDHVMVENKXXXXXXXXXXXXXXXXXXXKMEAPSREIETV--GRTFLDLNELAP 572
           D     E++ +  NK                          E+E V   R +LDLNELAP
Sbjct: 690 DTTNGKENNQL--NKSNGTTD------------------QEEVEGVVGKRRYLDLNELAP 729

Query: 573 GGGFDDGPSLTMKDED-MDNS 592
             GFDDGPS  +KD+D  DNS
Sbjct: 730 VSGFDDGPSTVLKDDDKTDNS 750



>AT5G25580.1 | chr5:8903550-8906108 FORWARD LENGTH=406
          Length = 405

 Score =  189 bits (480), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 16/270 (5%)

Query: 2   ALITPNSTLDDVHMPLLKSIPPVTRMAMGRGTWVTVLCRKLRDWWHWVAEGDIPIVASHG 61
            LI  N+T   +H+ LLK IPPV +       W+TVLC+KL  WW W+A+G+I I  + G
Sbjct: 82  GLIESNTTNAQLHIALLKGIPPVNKTLDDANAWITVLCKKLAPWWPWIAKGEIHITVNKG 141

Query: 62  TEIEAYKVLEPATRLIILKAICDIRVEQEDIRNFIDSSLKHGYDLSTFRKERIGGDAYGI 121
            EI  Y+ L+   RL ILKA+C++RV+Q+D R++I  + K G   S+ RK ++GGD    
Sbjct: 142 EEISEYQGLDSINRLKILKALCELRVQQDDARSYIQENTKEGDWDSSLRKRKLGGDGKKT 201

Query: 122 SYWYEDDPILGHRLYREIRRVEQLKKEPGKRSRGKGGSIILPVVSYQWETVASNFDEFDD 181
           SYW++ + I G+RLYRE+  +          S+   GS    +    WET A+N DEF  
Sbjct: 202 SYWFDGNDIQGYRLYREVNGI----------SKKNAGS---DLSCLSWETEATNLDEFQS 248

Query: 182 VAEKLFSSRNRTEANLGKKLKIEYLPDIEKIHXXXXXXXXXXXXXALLID-SFLAPDGFT 240
           VA +L SS+  + A  G+ ++ E +P +EK H              ++++ +F  P    
Sbjct: 249 VARELSSSKASSLAATGQMIETEAIPVVEKYHKKRERAIKKKMKEEMVVNVNFSRP--LR 306

Query: 241 TGRSLRDRKPVTYTFDEYDRSISEAIKITK 270
           T RS R+  P TYTFDEYD+ IS+A++ T+
Sbjct: 307 TTRSCRNHMPATYTFDEYDKMISDAVEETE 336



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.133    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,600,825
Number of extensions: 465003
Number of successful extensions: 1174
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1168
Number of HSP's successfully gapped: 2
Length of query: 592
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 488
Effective length of database: 8,255,305
Effective search space: 4028588840
Effective search space used: 4028588840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 114 (48.5 bits)