BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0191000 Os07g0191000|AK071379
         (340 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G39120.1  | chr4:18225578-18227988 REVERSE LENGTH=376          419   e-118
AT1G31190.1  | chr1:11144861-11146800 FORWARD LENGTH=372           97   2e-20
AT3G02870.1  | chr3:627742-629682 REVERSE LENGTH=272               91   1e-18

>AT4G39120.1 | chr4:18225578-18227988 REVERSE LENGTH=376
          Length = 375

 Score =  419 bits (1078), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/341 (59%), Positives = 253/341 (74%), Gaps = 17/341 (4%)

Query: 8   VPPTSPL-----PHSRAAPRRHLRAGLLHGSVATAAVV---RACGVTTGHRRRMGSVRAS 59
           +PP SP      P  R +            S A A  V   R C     + +R      S
Sbjct: 44  IPPQSPALRSANPSLRISSSYSNSRLSFLSSSAIAVPVSRRRFCLTMASNSKRPNISNES 103

Query: 60  PRAGGWEVAMADKEGVGVERLVEVAQRAADAAGEVLRKYFRQRVEIIDKEDQSPVTIADR 119
           P        ++D E   ++R   V    ADA+GEV+RKYFR++ +I+DK+D SPVTIAD+
Sbjct: 104 PSE------LSDTE---LDRFAAVGNALADASGEVIRKYFRKKFDIVDKDDMSPVTIADQ 154

Query: 120 EAEEAMVSVILKSFPSHAVFGEENGWRCVEKSADYVWVLDPIDGTKSFITGKPLFGTLIS 179
            AEEAMVS+I ++ PSHA++GEE GWRC E+SADYVWVLDPIDGTKSFITGKP+FGTLI+
Sbjct: 155 MAEEAMVSIIFQNLPSHAIYGEEKGWRCKEESADYVWVLDPIDGTKSFITGKPVFGTLIA 214

Query: 180 LLYKGKPVIGIIDQPILRERWVGVDGMKTTLNGQEISVRPCNVLAQAYLYTTSPHLFAGE 239
           LLYKGKP++G+IDQPIL+ERW+G++G +T LNG++IS R C  L+QAYLYTTSPHLF+ E
Sbjct: 215 LLYKGKPILGLIDQPILKERWIGMNGRRTKLNGEDISTRSCPKLSQAYLYTTSPHLFSEE 274

Query: 240 AEDAFIRVRDKVKVPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSIT 299
           AE A+ RVRDKVKVPLYGCDCYAYALLASGFVDLV+ESGLKPYDFL+LVPVIEGAGG+IT
Sbjct: 275 AEKAYSRVRDKVKVPLYGCDCYAYALLASGFVDLVIESGLKPYDFLALVPVIEGAGGTIT 334

Query: 300 DWKGNKLHWPVSAESRPESFNVVASGDARVHKQALDALQWH 340
           DW G +  W  S+ +   SFNVVA+GD+ +H+QAL++L+WH
Sbjct: 335 DWTGKRFLWEASSSAVATSFNVVAAGDSDIHQQALESLEWH 375



>AT1G31190.1 | chr1:11144861-11146800 FORWARD LENGTH=372
          Length = 371

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 19/241 (7%)

Query: 80  LVEVAQRAADAAGEVLRKYFRQRVEIIDKEDQSPVTIADREAEEAMVSVILKSFPSHAVF 139
           L+EV + AA    EV+ +   +   I  K     VT  D+ +E A++ V+ K+F  H + 
Sbjct: 87  LLEVVELAAKTGAEVVMEAVNKPRNITYKGLSDLVTDTDKASEAAILEVVKKNFSDHLIL 146

Query: 140 GEENGWRCVEKSADYVWVLDPIDGTKSFITGKPLFGTLISLLYKGKP----VIGIIDQPI 195
           GEE G    + S+DY+W +DP+DGT +F  G P F   + +LY+G P    V+  +  P+
Sbjct: 147 GEEGGI-IGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLYRGNPAAASVVEFVGGPM 205

Query: 196 L--RERWVGVDGMKTTLNGQEISVRPCNVLAQAYLYTTSPHLFAGEAEDAFIRVRDKVK- 252
                 +    G     NGQ+I V   + + +A L T     F  E +DA+    +  K 
Sbjct: 206 CWNTRTFSATAGGGALCNGQKIHVSKTDAVERALLITG----FGYEHDDAWSTNMELFKE 261

Query: 253 -------VPLYGCDCYAYALLASGFVDLVVESGLKPYDFLSLVPVIEGAGGSITDWKGNK 305
                  V   G        +A G  +   E  LKP+D  + V ++E AGG++T   G K
Sbjct: 262 FTDVSRGVRRLGAAAVDMCHVALGIAESYWEYRLKPWDMAAGVLIVEEAGGAVTRMDGGK 321

Query: 306 L 306
            
Sbjct: 322 F 322



>AT3G02870.1 | chr3:627742-629682 REVERSE LENGTH=272
          Length = 271

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 118/246 (47%), Gaps = 10/246 (4%)

Query: 69  MADKEGVGVERLVEVAQRAADAAGEVLRKYFRQRVEIIDKEDQSPVTIADREAEEAMVSV 128
           MAD + +  ++ +  A  AA  AG+++RK F +   +  K     VT  D+  EE + + 
Sbjct: 1   MADNDSL--DQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNH 58

Query: 129 ILKSFPSHAVFGEEN--GWRCVEKSADYVWVLDPIDGTKSFITGKPLFGTLISLLYKGKP 186
           + + FP+H   GEE    +   E + +  W++DP+DGT +F+ G P     I L     P
Sbjct: 59  LKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVP 118

Query: 187 VIGIIDQPILRERWVGVDGMKTTLNGQEISVRPCNVLAQAYLYTTS-PHLFAGEAEDAFI 245
           V+G++  PI+ E + GV G    LNG+ I V   + L  A L T +         +D   
Sbjct: 119 VVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTN 178

Query: 246 RVRD---KVK-VPLYGCDCYAYALLASGFVDLVVESGL-KPYDFLSLVPVIEGAGGSITD 300
           R+     KV+ + + G        +A G VD+  E G   P+D  + + +++ AGG I D
Sbjct: 179 RINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVKEAGGLIFD 238

Query: 301 WKGNKL 306
             G  L
Sbjct: 239 PSGKDL 244



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,418,321
Number of extensions: 314147
Number of successful extensions: 827
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 828
Number of HSP's successfully gapped: 3
Length of query: 340
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 241
Effective length of database: 8,392,385
Effective search space: 2022564785
Effective search space used: 2022564785
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)