BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0185200 Os07g0185200|AK066157
(395 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14500.1 | chr4:8334391-8337022 FORWARD LENGTH=434 392 e-109
AT3G23080.1 | chr3:8207612-8209181 REVERSE LENGTH=420 380 e-106
AT1G64720.1 | chr1:24046887-24048537 REVERSE LENGTH=386 311 4e-85
AT5G54170.1 | chr5:21985056-21987039 REVERSE LENGTH=450 303 2e-82
AT3G13062.2 | chr3:4184777-4187268 FORWARD LENGTH=441 140 1e-33
AT1G55960.1 | chr1:20927962-20929825 REVERSE LENGTH=404 131 7e-31
>AT4G14500.1 | chr4:8334391-8337022 FORWARD LENGTH=434
Length = 433
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/301 (63%), Positives = 231/301 (76%), Gaps = 8/301 (2%)
Query: 91 VVTEKDLEHLVQLLDNKESGDTTWQHLMERTTSNMTYKAWRREPEVGPIMYCSRTIFEDA 150
+VTE DLEHL+QLL+ + WQ +M++TT NM+Y+AWR EPE GP++Y SRT+FEDA
Sbjct: 136 IVTENDLEHLLQLLEVGNAA-LEWQSMMDKTTPNMSYQAWRHEPETGPVIYRSRTVFEDA 194
Query: 151 TPELVRDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIFGRRI 210
TP++VRDFFWDDEFR KWD MLA FK LEE Q GTMI+ W KKFPFFCSDREYI GRRI
Sbjct: 195 TPDIVRDFFWDDEFRPKWDFMLANFKTLEEDTQTGTMIVQWRKKFPFFCSDREYIIGRRI 254
Query: 211 WESGKTYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVTLVHYE 270
WESGK YYCVTKGVPYPALPK++KPRRVELYFSSW IRAV+S K DGQQ+ACEV+LVHYE
Sbjct: 255 WESGKKYYCVTKGVPYPALPKRDKPRRVELYFSSWVIRAVESRKGDGQQTACEVSLVHYE 314
Query: 271 DMGIPKDVAKVGVRHGMWGAVKKFQSGFRAYQQMRDTENTLSRSAIMARVTTKTSIASS- 329
DMGIPKDVAK+GVRHGMWGAVKK SG RAYQ R ++++LSR A MAR+TTK ++ S+
Sbjct: 315 DMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKSDSSLSRIAQMARITTKLNMDSAE 374
Query: 330 SCPLDQEPSNAAKTIDESENSRAVQPGFDWKWXXXXXXXXXXXXLNTGLVGKALLIGAAS 389
S D++ S A + + ++ R DWKW L++G++GKALL GA
Sbjct: 375 SSSRDEDRSRAMEYARQRDHLR-----MDWKW-VVVGGVALACGLHSGIIGKALLAGAGQ 428
Query: 390 R 390
R
Sbjct: 429 R 429
>AT3G23080.1 | chr3:8207612-8209181 REVERSE LENGTH=420
Length = 419
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/417 (50%), Positives = 256/417 (61%), Gaps = 45/417 (10%)
Query: 11 LLRRPAVAEMAVDVLLCAVPIWAAVMIGLVM-----PRLLSTAF-GSRGKHQ-------- 56
+P+V E VDVLLCAVPIW VMIGL++ PR S + G R K +
Sbjct: 7 FFNKPSVTETFVDVLLCAVPIWVTVMIGLLIGWSWRPRWTSLVYLGFRSKLRFLCTVPPG 66
Query: 57 -------------------RKXXXXXXXXXXXXXXXXXXXXXXXRTFFEGGHHVVTEKDL 97
E VVTEKDL
Sbjct: 67 FGARRIWLAFTALSAFSVCSTSNKSSVNNGSSKPVEEEAFSRASDKVTEKEKDVVTEKDL 126
Query: 98 EHLVQLLDNKESGDTT--WQHLMERTTSNMTYKAWRREPEVGPIMYCSRTIFEDATPELV 155
EHL+ E+G+ + WQ +M+++T NM+Y+AWR EPE+GP++Y SRT+FED TP++V
Sbjct: 127 EHLLH---LLEAGNASFEWQSMMDKSTPNMSYQAWRHEPEIGPVVYRSRTVFEDVTPDIV 183
Query: 156 RDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIFGRRIWESGK 215
RDFFWDDEFR KWD MLAYFK LEE P+ GT I+HWIKKFPFFCSDREYI GRRIWESG+
Sbjct: 184 RDFFWDDEFRPKWDTMLAYFKTLEEDPKTGTTIVHWIKKFPFFCSDREYIIGRRIWESGR 243
Query: 216 TYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVTLVHYEDMGIP 275
YY VTKGVPY AL K++KPRRVELYFSSW I AV+S K DGQ +ACEV+LVHYEDMGIP
Sbjct: 244 KYYAVTKGVPYKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYEDMGIP 303
Query: 276 KDVAKVGVRHGMWGAVKKFQSGFRAYQQMRDTENTLSRSAIMARVTTKTS--IASSSCPL 333
KDVAK+GVRHGMWGAVKK SG RAYQ R +LSRSA MA +TTK + + +S
Sbjct: 304 KDVAKLGVRHGMWGAVKKLNSGLRAYQSARKPGTSLSRSAQMASITTKLNMDLVETSGAE 363
Query: 334 DQEPSNAAKTIDESENSRAVQPGFDWKWXXXXXXXXXXXXLNTGLVGKALLIGAASR 390
D+E A E+ + Q G DWKW L++ +GKAL++GA R
Sbjct: 364 DEERGRAV----ENARKQNDQFGVDWKW-IVVGGVALACGLHSSAIGKALMVGAGQR 415
>AT1G64720.1 | chr1:24046887-24048537 REVERSE LENGTH=386
Length = 385
Score = 311 bits (797), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/299 (50%), Positives = 199/299 (66%), Gaps = 10/299 (3%)
Query: 92 VTEKDLEHLVQLLDNKESGDTTWQHLMERTTSNMTYKAWRREPEVGPIMYCSRTIFEDAT 151
VT+ D HL +L++ K+ G W +M+R+T +Y+AWRR+PE GP Y SRT+FEDAT
Sbjct: 89 VTDDDFRHLWKLVEVKDGG-PCWIQMMDRSTPTFSYQAWRRDPENGPPQYRSRTVFEDAT 147
Query: 152 PELVRDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIFGRRIW 211
PE+VRDFFWDDEFR KWD ML Y LE GTM++ W++KFPFFCSDREYI GRRIW
Sbjct: 148 PEMVRDFFWDDEFRSKWDDMLLYSSTLERCKDTGTMVVQWVRKFPFFCSDREYIIGRRIW 207
Query: 212 ESGKTYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVTLVHYED 271
++G+ +YC+TKGV YP++P++ KPRRV+LY+SSW IRAV+S + DG+ ++CEV L H+ED
Sbjct: 208 DAGRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWCIRAVESKRGDGEMTSCEVLLFHHED 267
Query: 272 MGIPKDVAKVGVRHGMWGAVKKFQSGFRAYQQMRDTENTLSRSAIMARVTTKTSIASSSC 331
MGIP ++AK+GVR GMWGAVKK + G RAYQ+ + LS SAIMA + TK S
Sbjct: 268 MGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQRAKAAGAGLSPSAIMAHINTKVSA----- 322
Query: 332 PLDQEPSNAAKTIDESENSRAVQPGFDWKWXXXXXXXXXXXXLNTGLVGKALLIGAASR 390
+E N +I E + K L+ GL+ KA++ G A R
Sbjct: 323 ---EEFMNERGSIAEVTGDKPTGKNIP-KILVVGGAIALACTLDKGLLTKAVIFGVARR 377
>AT5G54170.1 | chr5:21985056-21987039 REVERSE LENGTH=450
Length = 449
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 142/256 (55%), Positives = 182/256 (71%), Gaps = 9/256 (3%)
Query: 90 HVVTEKDLEHLVQLLDNKESGDTTWQHLMERTTSNMTYKAWRREPEVGPIMYCSRTIFED 149
+ VTE DL HLVQL++ K+ G W +M+R T M Y+AW REP+ GP Y SRT+FED
Sbjct: 127 NTVTELDLRHLVQLVERKDGGQA-WIQMMDRFTPGMRYQAWLREPKNGPTEYRSRTVFED 185
Query: 150 ATPELVRDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIFGRR 209
ATP ++RDFFWDDEFR WD ML+ +EE P GTMI+ WI+KFPFFCSDREY+ GRR
Sbjct: 186 ATPVMLRDFFWDDEFRPTWDTMLSNSTTVEECPSTGTMIVRWIRKFPFFCSDREYVIGRR 245
Query: 210 IWESGKTYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVTLVHY 269
IW G +YYCVTKGV P++P K +RV+L++SSW IR V+S + DG SACEV L H+
Sbjct: 246 IWNCGNSYYCVTKGVSVPSIPPNNKQKRVDLFYSSWCIRPVESRRDDGVTSACEVLLFHH 305
Query: 270 EDMGIPKDVAKVGVRHGMWGAVKKFQSGFRAYQQMR--DTENTLSRSAIMARVTTK---- 323
EDMGIP+++AK+GV+ GMWGAVKK + G RAYQ R D LSRSA MA++ TK
Sbjct: 306 EDMGIPREIAKLGVKRGMWGAVKKMEPGLRAYQTHRLSDGGTKLSRSAFMAQINTKITQD 365
Query: 324 --TSIASSSCPLDQEP 337
S+++ + P+ + P
Sbjct: 366 HLISLSNGASPVTETP 381
>AT3G13062.2 | chr3:4184777-4187268 FORWARD LENGTH=441
Length = 440
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 129/233 (55%), Gaps = 10/233 (4%)
Query: 91 VVTEKDLEHLVQLLDNKESGDTTWQHLMERTTSNMTYKAWRREPEVG-PIMYCSRTIFED 149
+V+++DL+ L+Q L + W+ +++++ ++Y A +P G P+ Y S T+FED
Sbjct: 83 LVSDEDLKGLIQKLGERSEDAEIWEDVIKKSNPRISYTAKCCKPTDGSPMKYLSTTVFED 142
Query: 150 ATPELVRDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIFGRR 209
+PE++RDF+ D+E+R +WD + + L+ +G I IKKFP + REY+ +
Sbjct: 143 CSPEVLRDFYMDNEYRKQWDKTVVEHEQLQVDSNSGIEIGRTIKKFPLL-TPREYVLAWK 201
Query: 210 IWESGKTYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVTLVHY 269
+WE +YC K + +P++ K RV + S WRIR V ++ACE+ +VH
Sbjct: 202 LWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVPG------RNACEIHMVHQ 255
Query: 270 EDMGIPKDVAKVGVRHGMWGAVKKFQSGFRAY--QQMRDTENTLSRSAIMARV 320
ED G+ ++AK+ G+W V K ++ R Y R TLS ++M ++
Sbjct: 256 EDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGPTLSAVSLMKKI 308
>AT1G55960.1 | chr1:20927962-20929825 REVERSE LENGTH=404
Length = 403
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 13/216 (6%)
Query: 91 VVTEKDLEHLVQLLDNKESGDTT--WQHLMERTTSNMTYKAWRREPEVG--PIMYCSRTI 146
+V+++DL+ L++ L+ +E+ D+T W+H++ ++ ++Y A R +P+ G P+ Y S T+
Sbjct: 82 LVSDEDLKFLIENLE-EETNDSTEIWEHVIHKSNDRISYSAKRCKPKDGGGPMKYLSVTV 140
Query: 147 FEDATPELVRDFFWDDEFRLKWDPMLAYFKILEEFPQNGTMIIHWIKKFPFFCSDREYIF 206
FE + E+VRDF+ D+++R WD + + L+ G I IKKFP S REY+
Sbjct: 141 FEGFSAEIVRDFYMDNDYRKLWDKTVVEHEQLQVDSNTGIEIGRTIKKFPLLTS-REYVL 199
Query: 207 GRRIWESG-KTYYCVTKGVPYPALPKKEKPRRVELYFSSWRIRAVQSPKQDGQQSACEVT 265
R+W+ K +YC TK + +P++ K RV + S WRIR V ++ACE+
Sbjct: 200 AWRLWQGKEKKFYCFTKECDHNMVPQQRKYVRVSYFRSGWRIRQVPG------RNACEIK 253
Query: 266 LVHYEDMGIPKDVAKVGVRHGMWGAVKKFQSGFRAY 301
+ H E+ G+ ++AK+ G+W V K ++ Y
Sbjct: 254 MFHQENAGLNVEMAKLAFSKGIWSYVCKMENALCKY 289
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,155,970
Number of extensions: 326657
Number of successful extensions: 687
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 676
Number of HSP's successfully gapped: 6
Length of query: 395
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 294
Effective length of database: 8,337,553
Effective search space: 2451240582
Effective search space used: 2451240582
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)