BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0182200 Os07g0182200|AK066623
(136 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02590.1 | chr4:1137968-1140306 REVERSE LENGTH=311 169 3e-43
AT1G03040.1 | chr1:704279-706457 REVERSE LENGTH=303 160 1e-40
AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351 127 2e-30
AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311 121 1e-28
AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298 119 4e-28
AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525 59 7e-10
AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374 57 2e-09
AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211 55 9e-09
AT2G20180.2 | chr2:8704525-8706538 REVERSE LENGTH=479 53 4e-08
AT2G46970.1 | chr2:19295617-19297678 REVERSE LENGTH=417 52 1e-07
AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400 51 2e-07
AT4G28790.1 | chr4:14218329-14220173 FORWARD LENGTH=414 50 3e-07
AT2G43010.1 | chr2:17887003-17888823 FORWARD LENGTH=431 50 3e-07
AT4G33880.1 | chr4:16239566-16241052 REVERSE LENGTH=353 50 3e-07
AT2G14760.3 | chr2:6321840-6323312 REVERSE LENGTH=342 49 6e-07
AT3G59060.2 | chr3:21828189-21829895 REVERSE LENGTH=445 49 8e-07
AT1G27740.1 | chr1:9654753-9655806 FORWARD LENGTH=259 48 1e-06
AT3G21330.1 | chr3:7507720-7508841 FORWARD LENGTH=374 48 2e-06
AT5G37800.1 | chr5:15036197-15037574 FORWARD LENGTH=308 47 3e-06
AT1G66470.1 | chr1:24795326-24796598 FORWARD LENGTH=299 46 5e-06
AT4G28811.1 | chr4:14225335-14227840 FORWARD LENGTH=545 46 5e-06
AT5G43175.1 | chr5:17334261-17335234 FORWARD LENGTH=224 46 7e-06
AT1G02340.1 | chr1:465933-467685 REVERSE LENGTH=293 45 9e-06
>AT4G02590.1 | chr4:1137968-1140306 REVERSE LENGTH=311
Length = 310
Score = 169 bits (429), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 99/135 (73%), Gaps = 3/135 (2%)
Query: 4 LQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDIPIS--VKG 61
LQ+LVP NKTDRAAM+DEI+DYVKFLRLQVKVLSMSR D+P+S V+
Sbjct: 175 LQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVED 234
Query: 62 EASDSG-SKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQ 120
E + G + Q WEKWS DGTE+QVAKLMEE++GAAMQ LQSKALCMMPISLAMAIY +Q
Sbjct: 235 ETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQ 294
Query: 121 HSQDGHSVKPEPNTP 135
VKPE N P
Sbjct: 295 PPDTSSVVKPENNPP 309
>AT1G03040.1 | chr1:704279-706457 REVERSE LENGTH=303
Length = 302
Score = 160 bits (406), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 98/134 (73%), Gaps = 5/134 (3%)
Query: 3 ALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDIPISVKGE 62
+LQ+LVP NKTDRAAM+DEI+DYVKFLRLQVKVLSMSR ++P+S
Sbjct: 172 SLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLS---- 227
Query: 63 ASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIYDTQHS 122
+S Q +WEKWS DGTE+QVAKLMEE++GAAMQ LQSKALC+MPISLAMAIY +Q
Sbjct: 228 SSVEDETQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPP 287
Query: 123 QDGHS-VKPEPNTP 135
S VKPE N P
Sbjct: 288 DTSSSIVKPEMNPP 301
>AT2G24260.1 | chr2:10319646-10322177 REVERSE LENGTH=351
Length = 350
Score = 127 bits (318), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 87/128 (67%), Gaps = 5/128 (3%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDIPISVK 60
M+ALQ+LVPN NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR + S
Sbjct: 164 MKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGS-H 222
Query: 61 GEASDS---GSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISLAMAIY 117
G AS + GS+ S TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA AI
Sbjct: 223 GNASSAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAIS 282
Query: 118 D-TQHSQD 124
T HS++
Sbjct: 283 TATCHSRN 290
>AT4G30980.1 | chr4:15079489-15081606 REVERSE LENGTH=311
Length = 310
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 79/124 (63%), Gaps = 25/124 (20%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDIPISVK 60
M++LQ+LVPN NKTD+A+MLDEI+DYVKFL+LQVKVLSMSR +
Sbjct: 156 MKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR-----------------LG 198
Query: 61 GEASDS--------GSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALCMMPISL 112
G AS S GS + TE QVAKLMEED+G+AMQ+LQ K LC+MPISL
Sbjct: 199 GAASASSQISEDAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISL 258
Query: 113 AMAI 116
A I
Sbjct: 259 ATTI 262
>AT5G58010.1 | chr5:23483670-23484889 REVERSE LENGTH=298
Length = 297
Score = 119 bits (298), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 87/138 (63%), Gaps = 20/138 (14%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRXXXXXXXXXXXXDIPI--- 57
M++LQ+LVPNTNKTD+A+MLDEI++YV+FL+LQVKVLSMSR +
Sbjct: 125 MKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLNGLSAEAG 184
Query: 58 -----------SVKGEASDSGSKQQIWEKWSTDGTEKQVAKLMEEDIGAAMQFLQSKALC 106
+ G + +GS + S TE++VAKLMEED+G+AMQ+LQ K LC
Sbjct: 185 GRLNALTAPCNGLNGNGNATGSSNE-----SLRSTEQRVAKLMEEDMGSAMQYLQGKGLC 239
Query: 107 MMPISLAMAI-YDTQHSQ 123
+MPISLA AI T HS+
Sbjct: 240 LMPISLATAISSSTTHSR 257
>AT1G09530.1 | chr1:3077216-3079367 FORWARD LENGTH=525
Length = 524
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 36/40 (90%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMS 40
MRALQ+L+PN NK D+A+MLDE ++Y+K L+LQV+++SM+
Sbjct: 363 MRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMA 402
>AT4G36930.1 | chr4:17414167-17415945 FORWARD LENGTH=374
Length = 373
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 36/39 (92%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
M+ALQ L+PN+NKTD+A+MLDE ++Y+K L+LQV++L+M
Sbjct: 217 MKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM 255
>AT5G67110.1 | chr5:26785332-26786338 REVERSE LENGTH=211
Length = 210
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 35/39 (89%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
M+ALQ L+PN+NKTD+A+MLDE ++Y+K L+LQV+ L++
Sbjct: 113 MKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAV 151
>AT2G20180.2 | chr2:8704525-8706538 REVERSE LENGTH=479
Length = 478
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 35/39 (89%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
M+ALQ+L+P NK+D+A+MLDE ++Y+K L+LQ++++SM
Sbjct: 304 MKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSM 342
>AT2G46970.1 | chr2:19295617-19297678 REVERSE LENGTH=417
Length = 416
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 33/39 (84%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
MRALQDL+PN K D+A++LDE + Y++ L+LQV+++SM
Sbjct: 249 MRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMMSM 287
>AT4G00050.1 | chr4:17863-19848 FORWARD LENGTH=400
Length = 399
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 33/38 (86%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
M+ LQ LVPN++KTD+A+MLDE+++Y+K L+ QV ++S
Sbjct: 233 MKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMS 270
>AT4G28790.1 | chr4:14218329-14220173 FORWARD LENGTH=414
Length = 413
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 33/39 (84%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
M+ALQ+L+P KTDR++MLD++++YVK L+ Q+++ SM
Sbjct: 297 MKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSM 335
>AT2G43010.1 | chr2:17887003-17888823 FORWARD LENGTH=431
Length = 430
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 34/37 (91%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 37
M+ALQ+L+P+ +KTD+A++LDE +DY+K L+LQ++V+
Sbjct: 277 MKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>AT4G33880.1 | chr4:16239566-16241052 REVERSE LENGTH=353
Length = 352
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
+R LQ+LVPN K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 292 LRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 329
>AT2G14760.3 | chr2:6321840-6323312 REVERSE LENGTH=342
Length = 341
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
+R LQ LVPN K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 276 LRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLS 313
>AT3G59060.2 | chr3:21828189-21829895 REVERSE LENGTH=445
Length = 444
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 35/39 (89%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSM 39
M+ALQ+L+P+ ++TD+A++LDE +DY+K L++Q++V+ M
Sbjct: 276 MKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWM 314
>AT1G27740.1 | chr1:9654753-9655806 FORWARD LENGTH=259
Length = 258
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
++ LQ+LVPN K D + ML+E + YVKFL+LQ+K+LS
Sbjct: 193 LKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLS 230
>AT3G21330.1 | chr3:7507720-7508841 FORWARD LENGTH=374
Length = 373
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 37
+R LQ LVP K D A+MLDE +Y+KFLR QVK L
Sbjct: 295 IRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKAL 331
>AT5G37800.1 | chr5:15036197-15037574 FORWARD LENGTH=308
Length = 307
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
++ LQ+LVPN K D ML++ + YVKFL++QVKVL+
Sbjct: 227 LKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLA 264
>AT1G66470.1 | chr1:24795326-24796598 FORWARD LENGTH=299
Length = 298
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
++ LQ+LVPN K D ML++ + YVKFL++QVKVL+
Sbjct: 221 LKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLA 258
>AT4G28811.1 | chr4:14225335-14227840 FORWARD LENGTH=545
Length = 544
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 32/38 (84%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
M+ LQ+L+P KTD+ +ML+++++YVK L+LQ++++S
Sbjct: 377 MKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMS 414
>AT5G43175.1 | chr5:17334261-17335234 FORWARD LENGTH=224
Length = 223
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
++ LQ LVPN K D + ML++ + YVKFL+LQ+K+LS
Sbjct: 158 LKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLS 195
>AT1G02340.1 | chr1:465933-467685 REVERSE LENGTH=293
Length = 292
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 32/38 (84%)
Query: 1 MRALQDLVPNTNKTDRAAMLDEILDYVKFLRLQVKVLS 38
MR LQ LVPN +KTD+ ++LD+ ++Y+K L+LQ++++S
Sbjct: 154 MRKLQQLVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMS 191
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,529,278
Number of extensions: 71442
Number of successful extensions: 301
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 312
Number of HSP's successfully gapped: 23
Length of query: 136
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 48
Effective length of database: 8,693,961
Effective search space: 417310128
Effective search space used: 417310128
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 106 (45.4 bits)