BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0174900 Os07g0174900|Os07g0174900
(171 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171 101 2e-22
AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157 95 2e-20
AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172 86 1e-17
AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184 84 3e-17
AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194 71 3e-13
AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177 68 2e-12
AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159 64 3e-11
AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228 64 5e-11
AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205 62 1e-10
AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206 62 2e-10
AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183 59 2e-09
AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170 58 3e-09
AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209 56 1e-08
AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194 52 1e-07
AT5G13900.1 | chr5:4481346-4481876 REVERSE LENGTH=152 52 2e-07
AT3G22580.1 | chr3:8002762-8003145 REVERSE LENGTH=128 51 3e-07
AT1G27950.1 | chr1:9740740-9741991 FORWARD LENGTH=194 50 9e-07
AT1G05450.2 | chr1:1600004-1601086 FORWARD LENGTH=206 49 1e-06
>AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171
Length = 170
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%)
Query: 28 QSGCTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVN 87
QS CT+ ++S++PCL+Y+ GN++ P CC LS VV+S P+CLC VL GG S LG+ VN
Sbjct: 25 QSSCTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVN 84
Query: 88 TTRALELPAACGVKTPPPSECS 109
T+AL LP AC V+TPP S C+
Sbjct: 85 QTQALGLPRACNVQTPPVSRCN 106
>AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157
Length = 156
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 55/81 (67%)
Query: 28 QSGCTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVN 87
QS CT+ ++S+APCL ++ N S P+ CC L+ VV+ ECLC VL GG S LG+ VN
Sbjct: 23 QSSCTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINVN 82
Query: 88 TTRALELPAACGVKTPPPSEC 108
T+AL LP AC V+TPP S C
Sbjct: 83 ETQALALPKACHVETPPASRC 103
>AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172
Length = 171
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 28 QSGCTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSL-GVTV 86
Q+GC + SL+PCL Y+ G +S P+ SCC S+VV+S PECLC+V+ SS G
Sbjct: 22 QAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKF 81
Query: 87 NTTRALELPAACGVKTPPPSECS 109
N T AL LP AC V+TP PS C+
Sbjct: 82 NRTLALNLPTACNVQTPSPSLCN 104
>AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184
Length = 183
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 58/81 (71%)
Query: 29 SGCTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVNT 88
S C S + +L+PCL Y+ GN++ P+ CC+ L SV+KS P+C+C+ + ++G+ +N
Sbjct: 28 SSCVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINR 87
Query: 89 TRALELPAACGVKTPPPSECS 109
T+AL+LP AC ++TPP ++C+
Sbjct: 88 TQALQLPNACNIQTPPLTQCN 108
>AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194
Length = 193
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 31 CTSEMVSLAPCLDYMQ----GNASRPTASCCAALSSVVKSRPECLCAVLGGG-ASSLGVT 85
C + ++++ CL Y+ G A++P +CC AL+ +V+S P+CLC +L G A+ LG+
Sbjct: 38 CMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIK 97
Query: 86 VNTTRALELPAACGVKTPPPSECS 109
++ +AL+LP CGV TP PS CS
Sbjct: 98 IDKAKALKLPGVCGVITPDPSLCS 121
>AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177
Length = 176
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 31 CTSEMVSLAPCLDYMQ--GNASRPTASCCAALSSVVKSRPECLCAVLGGGAS-SLGVTVN 87
C M++++ C Y+Q N +P A+CC L+ +V+S PEC+C + GGGAS GV ++
Sbjct: 40 CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLD 99
Query: 88 TTRALELPAACGVKTPPPSECS 109
RA +L CGVK P PS CS
Sbjct: 100 KQRAEQLSTICGVKAPSPSLCS 121
>AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159
Length = 158
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 29 SGCTSEMVSLAPCLDYMQ--GNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTV 86
S C + +++L PCL ++ G A PTASCC++L +++ ++P CLC G + LG+ +
Sbjct: 26 SDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCE--GLKKAPLGIKL 83
Query: 87 NTTRALELPAACGVKTPPPSECSKV 111
N T++ LP AC + PP S C +
Sbjct: 84 NVTKSATLPVACKLNAPPVSACDSL 108
>AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228
Length = 227
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 31 CTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGAS-SLGVTVNTT 89
CT++++ L+ C+ Y+ G+A PT CCA V++ +C+C ++ LG+ +N T
Sbjct: 76 CTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGIKINAT 135
Query: 90 RALELPAACGVKTPPPSECSKV 111
A LP+AC + P ++C +
Sbjct: 136 LAAHLPSACHITAPNITDCISI 157
>AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205
Length = 204
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 31 CTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGG-GASSLGVTVNTT 89
CT ++V +A CL Y+QG A PT CC+ L V+ S +CLC ++ LG+ +N +
Sbjct: 35 CTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVS 94
Query: 90 RALELPAAC 98
AL LP+ C
Sbjct: 95 LALALPSVC 103
>AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206
Length = 205
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 31 CTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGG-GASSLGVTVNTT 89
CT+++V +A CL Y+QG A PT CC+ L V+ S +CLC ++ LG+ VN +
Sbjct: 36 CTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNVS 95
Query: 90 RALELPAAC 98
AL LP+ C
Sbjct: 96 LALALPSVC 104
>AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183
Length = 182
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 31 CTSEMVSLAPCLDYMQ--GNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVNT 88
C++ ++++A CL ++ G ++P +CC+ L +V+K+ +CLC A SLGVT+N
Sbjct: 43 CSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSA-SLGVTLNI 101
Query: 89 TRALELPAACGVKTPPPSEC 108
T+A LPAAC + P + C
Sbjct: 102 TKASTLPAACKLHAPSIATC 121
>AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170
Length = 169
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 31 CTSEMVSLAPCLDYMQGNAS--RPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVNT 88
C+S ++++A CL ++ ++ +P +CC+ L +VV++ PECLC + SLG+T++
Sbjct: 27 CSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAF-KNSGSLGLTLDL 85
Query: 89 TRALELPAACGVKTPPPSEC 108
++A LP+ C V PP + C
Sbjct: 86 SKAASLPSVCKVAAPPSARC 105
>AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209
Length = 208
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 29 SGCTSEMVSLAPCLDYMQ--GNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTV 86
S C++ + S+ CL Y+ N ++P SCC + +V++ P+C+CA L A +G+ +
Sbjct: 46 SDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGL-VSAGEMGIEL 104
Query: 87 NTTRALELPAACGVKTPPP 105
N+TRAL P AC + PP
Sbjct: 105 NSTRALATPKACKLSIAPP 123
>AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194
Length = 193
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 31 CTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGAS-SLGVTVNTT 89
C S ++SLAPC ++QG A P CC +L+ + CLC L ++ S +N T
Sbjct: 30 CASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQT 89
Query: 90 RALELPAACGV 100
AL+LP C +
Sbjct: 90 LALQLPPLCNI 100
>AT5G13900.1 | chr5:4481346-4481876 REVERSE LENGTH=152
Length = 151
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 38 LAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSL----GVTVNTTRALE 93
LAPCL+Y+ G P CC L SV+++ PECLC ++ SS G+ VN A
Sbjct: 36 LAPCLNYLNGTKEVPQV-CCNPLKSVIRNNPECLCRMISNRWSSQAERAGIDVND--AQM 92
Query: 94 LPAACGVKTPP 104
LPA CG P
Sbjct: 93 LPARCGEHVNP 103
>AT3G22580.1 | chr3:8002762-8003145 REVERSE LENGTH=128
Length = 127
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 28 QSGCTSEMV-SLAPCLDYMQGNA-SRPTAS-CCAALSSVVKSRPECLCAVLGGGASSLGV 84
QS C +E+ SL PC Y+ + S P S CC +L + K+ +C C L G S L +
Sbjct: 27 QSNCKNELKKSLKPCFSYLTSSYPSLPDDSDCCPSLLDISKTSVDCFCQYLNSGGSILDI 86
Query: 85 TVNTTRALELPAACGVKTPPPSECSK 110
N +A LP CGV S C++
Sbjct: 87 NANFIQARRLPEICGVDPYLASVCNE 112
>AT1G27950.1 | chr1:9740740-9741991 FORWARD LENGTH=194
Length = 193
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 31 CTSEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLG----GGASSLGVTV 86
C + + CLD+ G A+ P+ CC A+ + + P+CLC V+ GG + + V
Sbjct: 35 CNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGV 94
Query: 87 NTTRALELPAACGVKTPPPSECSKV 111
+ ++LP +C + + C K+
Sbjct: 95 QEDKLIQLPTSCQLHNASITNCPKL 119
>AT1G05450.2 | chr1:1600004-1601086 FORWARD LENGTH=206
Length = 205
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 33 SEMVSLAPCLDYMQGNASRPTASCCAALSSVVKSRPECLCAVLGGGASSLGVTVNTTRAL 92
S + S+ C ++ G S PT+ CC AL S+ + +CLC ++ G + + +N T A+
Sbjct: 36 SMLSSVTGCTSFLTGGGSFPTSDCCGALKSLTGTGMDCLCLIVTAGV-PISIPINRTLAI 94
Query: 93 ELPAACGV 100
LP ACG+
Sbjct: 95 SLPRACGI 102
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.123 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,332,148
Number of extensions: 68211
Number of successful extensions: 217
Number of sequences better than 1.0e-05: 23
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 23
Length of query: 171
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 80
Effective length of database: 8,611,713
Effective search space: 688937040
Effective search space used: 688937040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 108 (46.2 bits)