BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0174400 Os07g0174400|J065082K24
(131 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171 96 4e-21
AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157 87 3e-18
AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184 80 2e-16
AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172 72 7e-14
AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194 65 9e-12
AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159 60 3e-10
AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228 59 7e-10
AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170 57 2e-09
AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205 57 2e-09
AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209 57 3e-09
AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177 57 4e-09
AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183 56 5e-09
AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206 55 9e-09
AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257 50 3e-07
AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194 47 4e-06
>AT3G22600.1 | chr3:8006711-8007397 REVERSE LENGTH=171
Length = 170
Score = 96.3 bits (238), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINNTR 98
C +IS++ CL Y++GNS++P CC LS VV S P CLC VL GG S LG+ +N T+
Sbjct: 28 CTNALISMSPCLNYITGNSTSPNQQCCNQLSRVVQSSPDCLCQVLNGGGSQLGINVNQTQ 87
Query: 99 ALELPAACNVKTPPASQCSSKSISFHSSGES 129
AL LP ACNV+TPP S+C++ S+ +S
Sbjct: 88 ALGLPRACNVQTPPVSRCNTGGGGGGSTSDS 118
>AT4G14815.1 | chr4:8505122-8505760 FORWARD LENGTH=157
Length = 156
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINNTR 98
C +IS+A CL +++ N+S P CC L+ VV CLC VL GG S LG+ +N T+
Sbjct: 26 CTNVLISMAPCLSFITQNTSLPSQQCCNQLAHVVRYSSECLCQVLDGGGSQLGINVNETQ 85
Query: 99 ALELPAACNVKTPPASQCSSKS 120
AL LP AC+V+TPPAS+C S S
Sbjct: 86 ALALPKACHVETPPASRCHSGS 107
>AT2G48130.1 | chr2:19685263-19685977 REVERSE LENGTH=184
Length = 183
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 57/80 (71%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINNTR 98
C++ + +L+ CL Y++GNS+ P CC+ L SV+ S P C+C+ + ++G+ IN T+
Sbjct: 30 CVSTLTTLSPCLSYITGNSTTPSQPCCSRLDSVIKSSPQCICSAVNSPIPNIGLNINRTQ 89
Query: 99 ALELPAACNVKTPPASQCSS 118
AL+LP ACN++TPP +QC++
Sbjct: 90 ALQLPNACNIQTPPLTQCNA 109
>AT1G03103.1 | chr1:747219-747955 FORWARD LENGTH=172
Length = 171
Score = 72.0 bits (175), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSL-GVTINNT 97
C + SL+ CL Y++G SS+P SCC S+VV S P CLC+V+ SS G N T
Sbjct: 25 CRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSSPECLCSVVNSNESSFYGFKFNRT 84
Query: 98 RALELPAACNVKTPPASQCSS 118
AL LP ACNV+TP S C++
Sbjct: 85 LALNLPTACNVQTPSPSLCNT 105
>AT3G43720.1 | chr3:15615549-15617099 REVERSE LENGTH=194
Length = 193
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 39 CMTEIISLASCLGYMS----GNSSAPKPSCCTALSSVVTSKPACLCAVLGGG-ASSLGVT 93
CM ++++ CL Y++ G ++ P +CC AL+ +V S P CLC +L G A+ LG+
Sbjct: 38 CMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGIK 97
Query: 94 INNTRALELPAACNVKTPPASQCSSKSI 121
I+ +AL+LP C V TP S CS I
Sbjct: 98 IDKAKALKLPGVCGVITPDPSLCSLFGI 125
>AT5G09370.1 | chr5:2909450-2910475 REVERSE LENGTH=159
Length = 158
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 39 CMTEIISLASCLGYMS--GNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
C T +I+L CL ++S G + P SCC++L +++ +KP CLC G + LG+ +N
Sbjct: 28 CDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICLCE--GLKKAPLGIKLNV 85
Query: 97 TRALELPAACNVKTPPASQCSS 118
T++ LP AC + PP S C S
Sbjct: 86 TKSATLPVACKLNAPPVSACDS 107
>AT1G55260.1 | chr1:20614663-20616158 FORWARD LENGTH=228
Length = 227
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGAS-SLGVTINNT 97
C ++I L++C+ Y+ G++ AP CC V+ C+C ++ LG+ IN T
Sbjct: 76 CTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGIKINAT 135
Query: 98 RALELPAACNVKTPPASQCSS 118
A LP+AC++ P + C S
Sbjct: 136 LAAHLPSACHITAPNITDCIS 156
>AT2G13820.1 | chr2:5774295-5776279 REVERSE LENGTH=170
Length = 169
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKP--SCCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
C + I+++A CL +++ S+ KP +CC+ L +VV + P CLC + SLG+T++
Sbjct: 27 CSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKN-SGSLGLTLDL 85
Query: 97 TRALELPAACNVKTPPASQC 116
++A LP+ C V PP+++C
Sbjct: 86 SKAASLPSVCKVAAPPSARC 105
>AT2G44300.1 | chr2:18307468-18308286 REVERSE LENGTH=205
Length = 204
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGAS-SLGVTINNT 97
C +++ +A+CL Y+ G + +P P CC+ L V+ S CLC ++ LG+ IN +
Sbjct: 35 CTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVS 94
Query: 98 RALELPAACN 107
AL LP+ C+
Sbjct: 95 LALALPSVCH 104
>AT4G08670.1 | chr4:5536765-5538210 REVERSE LENGTH=209
Length = 208
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 39 CMTEIISLASCLGYMS--GNSSAPKPSCCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
C T I S+ CLGY+ N + P+ SCCT + +V+ P C+CA L A +G+ +N+
Sbjct: 48 CSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGL-VSAGEMGIELNS 106
Query: 97 TRALELPAACNVKTPP 112
TRAL P AC + P
Sbjct: 107 TRALATPKACKLSIAP 122
>AT2G27130.1 | chr2:11595379-11596395 FORWARD LENGTH=177
Length = 176
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 39 CMTEIISLASCLGYMS--GNSSAPKPSCCTALSSVVTSKPACLCAVLGGGAS-SLGVTIN 95
C+ +++++ C Y+ N P+ +CC L+ +V S P C+C + GGGAS GV ++
Sbjct: 40 CLVSMLNVSDCFSYVQVGSNEIKPEAACCPELAGMVQSSPECVCNLYGGGASPRFGVKLD 99
Query: 96 NTRALELPAACNVKTPPASQCS 117
RA +L C VK P S CS
Sbjct: 100 KQRAEQLSTICGVKAPSPSLCS 121
>AT5G64080.1 | chr5:25645475-25646638 REVERSE LENGTH=183
Length = 182
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKP--SCCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
C T I+++A CL ++S + KP +CC+ L +V+ + CLC AS LGVT+N
Sbjct: 43 CSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSAS-LGVTLNI 101
Query: 97 TRALELPAACNVKTPPASQC 116
T+A LPAAC + P + C
Sbjct: 102 TKASTLPAACKLHAPSIATC 121
>AT2G44290.1 | chr2:18305418-18306202 REVERSE LENGTH=206
Length = 205
Score = 55.1 bits (131), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGAS-SLGVTINNT 97
C +++ +A+CL Y+ G + +P P CC+ L V+ S CLC ++ LG+ +N +
Sbjct: 36 CTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGLQVNVS 95
Query: 98 RALELPAACN 107
AL LP+ C+
Sbjct: 96 LALALPSVCH 105
>AT1G36150.1 | chr1:13528257-13529470 FORWARD LENGTH=257
Length = 256
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPS--CCTALSSVVTSKPACLCAVLGGGASSLGVTINN 96
C + I S+ CL +++ S+ P P+ CC + +V+ P CLC+ L + +G +++
Sbjct: 45 CSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSAL-ESSREMGFVLDD 103
Query: 97 TRALELPAACNVKTPP 112
T+AL +P CNV P
Sbjct: 104 TKALAMPKICNVPIDP 119
>AT1G73890.1 | chr1:27787903-27788658 REVERSE LENGTH=194
Length = 193
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 39 CMTEIISLASCLGYMSGNSSAPKPSCCTALSSVVTSKPACLCAVLGGGAS-SLGVTINNT 97
C + ++SLA C ++ G + P CC +L+ + + + CLC L ++ S IN T
Sbjct: 30 CASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYSQEATCLCLFLNNTSTLSPAFPINQT 89
Query: 98 RALELPAACNV 108
AL+LP CN+
Sbjct: 90 LALQLPPLCNI 100
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.123 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,128,141
Number of extensions: 74308
Number of successful extensions: 273
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 259
Number of HSP's successfully gapped: 19
Length of query: 131
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 44
Effective length of database: 8,721,377
Effective search space: 383740588
Effective search space used: 383740588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 106 (45.4 bits)