BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0173200 Os07g0173200|AK061624
(453 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14900.1 | chr4:8521759-8523607 REVERSE LENGTH=533 305 4e-83
AT3G22440.1 | chr3:7959854-7961886 FORWARD LENGTH=533 303 1e-82
AT5G48385.1 | chr5:19609471-19611712 FORWARD LENGTH=559 115 5e-26
AT5G16320.1 | chr5:5344507-5345919 FORWARD LENGTH=471 71 1e-12
AT1G31814.1 | chr1:11412985-11414406 REVERSE LENGTH=474 68 1e-11
AT5G27230.1 | chr5:9584255-9587838 FORWARD LENGTH=949 54 2e-07
>AT4G14900.1 | chr4:8521759-8523607 REVERSE LENGTH=533
Length = 532
Score = 305 bits (780), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 156/375 (41%), Positives = 220/375 (58%), Gaps = 16/375 (4%)
Query: 15 FAELERQQQLLASCTRLYKQLEEHFASLERGLAARSDSLRHKXXXXXXXXXXXMDSLRRR 74
F E ++Q L+ SC L+K+L EHF S+E+ L +S++LR ++ L+ R
Sbjct: 18 FFEFQKQASLMTSCNLLWKELSEHFTSMEQNLMKKSEALRQMIETLDNQTQSSIELLKHR 77
Query: 75 EASIDGSVS-----------RALDHLDXXXXXXXXXXXXXXXXXXXXXXXXXMCARMDSA 123
E +ID SV ALD L+ +C +MD+
Sbjct: 78 EVTIDHSVEIAEGKVEERVRAALDSLEKARDCGDEDTGEVDDGDGLLSALKSLCLKMDAR 137
Query: 124 GFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPVDRREA--KNPTDLAWA 181
GF+GFV+AR+KE++ LR+++P AL CVDP K V++AV++VFPVD+R K D WA
Sbjct: 138 GFWGFVIARKKELENLRSQIPVALVDCVDPPKLVLEAVSEVFPVDKRGGGEKVSNDFGWA 197
Query: 182 CVLILEAAVPALADPDPEIGAARLLVPXXXXXXXXXXXXXWKEAAERKGGVEWTKPPDAH 241
CV+ILE+ +P + DP +G +RLLV WK + E +GG+E K PD H
Sbjct: 198 CVVILESLIPVMVDP--VMGKSRLLVTPSVKEKAKEIAETWKASLEERGGIENVKTPDVH 255
Query: 242 AFLQHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEEDMADIIEELIAKGQQL 301
FLQH+ TF + +++D +YR++VV +WR+QMP+LA+++GL + M D+IEELI +GQQL
Sbjct: 256 TFLQHLVTFGIVKKDDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELIIRGQQL 315
Query: 302 DAVNFAYEAGLQEKFPPVPLLKSYLADSKKXXXXXXXXXXXXXXXXXXXXXKKEQSVLRA 361
DAV+F +E GL FPPVPLLK+YL D+KK +KEQS LRA
Sbjct: 316 DAVHFTFEVGLVHLFPPVPLLKAYLRDAKK-ATALITDDSNNSGRSAHLVARKEQSALRA 374
Query: 362 VIKCIEDRKLEAEFP 376
V+KCIE+ KLE EFP
Sbjct: 375 VLKCIEEYKLEEEFP 389
>AT3G22440.1 | chr3:7959854-7961886 FORWARD LENGTH=533
Length = 532
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/377 (41%), Positives = 221/377 (58%), Gaps = 18/377 (4%)
Query: 15 FAELERQQQLLASCTRLYKQLEEHFASLERGLAARSDSLRHKXXXXXXXXXXXMDSLRRR 74
F E ++Q L+ SCT L+++L +HF SLE+ L +S++L+ ++SL+RR
Sbjct: 18 FEEFQKQTSLMTSCTLLWQELSDHFTSLEQNLMKKSEALKQMIETLDNQTQTSLESLKRR 77
Query: 75 EASIDGSVS-----------RALDHL----DXXXXXXXXXXXXXXXXXXXXXXXXXMCAR 119
E +ID SV AL+ L D +C +
Sbjct: 78 EVTIDHSVEIVAGKVGERARAALESLEKARDGCGDGSNDDSGDVDDEEGLLSALKSLCLK 137
Query: 120 MDSAGFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPVDRREAKNPTDLA 179
MD+ GF+ FV AR+KE++ LR+++P AL CVDPA V++A+++VFPVD R K D
Sbjct: 138 MDARGFWNFVTARKKELENLRSKIPAALVDCVDPAMLVLEAISEVFPVDTRGDKVSNDYG 197
Query: 180 WACVLILEAAVPALADPDPEIGAARLLVPXXXXXXXXXXXXXWKEAAERKGGVEWTKPPD 239
WACV+ILE+ P + DP IG +RLLV WK++ E +G +E K PD
Sbjct: 198 WACVVILESLTPVIVDP--VIGKSRLLVTPSVKEKAKEIAETWKKSLEERGRIENVKTPD 255
Query: 240 AHAFLQHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEEDMADIIEELIAKGQ 299
H FLQH+ TF + + ED +YR++VV +WR+QMP+LA+++GL + M D+IEELI++GQ
Sbjct: 256 VHTFLQHLVTFGIVKSEDLALYRKLVVGSAWRKQMPKLAVSVGLGDQMPDMIEELISRGQ 315
Query: 300 QLDAVNFAYEAGLQEKFPPVPLLKSYLADSKKXXXXXXXXXXXXXXXXXXXXXKKEQSVL 359
QLDAV+F YE GL +KFPPVPLLK+YL D+KK +KEQS L
Sbjct: 316 QLDAVHFTYEVGLVDKFPPVPLLKAYLRDAKK-SAASIMEDSSNTGRATHLVARKEQSAL 374
Query: 360 RAVIKCIEDRKLEAEFP 376
+AV+KCIE+ KLE EFP
Sbjct: 375 KAVLKCIEEYKLEEEFP 391
>AT5G48385.1 | chr5:19609471-19611712 FORWARD LENGTH=559
Length = 558
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 116 MCARMDSAGFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPV-----DRR 170
+C MDS G FV RK + +L+ E+P A + +PA V+D++ +P+ D +
Sbjct: 178 LCGDMDSTGLHKFVSDNRKNLASLKEEIPMAFRAAANPASLVLDSLEGFYPMEAPTADGK 237
Query: 171 EAKNPTDLAWACVLILEAAVPALADPDPEIGAARLLVPXXXXXXXXXXXXXWKEAAERKG 230
+ N + C++++E L+ D A +++ W E
Sbjct: 238 KDANLLGMRRTCIMLMECLSILLSGLDRNCLA--VVLSQNVKHRAKTIAEGWNPLLESLD 295
Query: 231 GVEWT-KPPDAHAFLQHVATFAVAE--REDRGIYRRIVVSFSWRRQMPRLALTLGLEEDM 287
+AHAFLQ +ATFA+ +ED + +++ S RRQ L +LGL E M
Sbjct: 296 MDACNGNSLEAHAFLQLLATFAIVADFKEDELL--KLIPMVSRRRQAAELCRSLGLAEKM 353
Query: 288 ADIIEELIAKGQQLDAVNFAYEAGLQEKFPPVPLLKSYLADSKKXXXXXXXXXXXXXXXX 347
+IE L+ G+Q+DAVN A+ L E+F PV LLKSYL ++++
Sbjct: 354 PGVIEVLVNSGKQIDAVNLAFAFELTEQFSPVSLLKSYLIEARR--SSPQGRPGNASPAV 411
Query: 348 XXXXXKKEQSVLRAVIKCIEDRKLEAEFP 376
++E L+ VIKCIE+ LE ++P
Sbjct: 412 QDEFNERELIGLKTVIKCIEEHSLEEQYP 440
>AT5G16320.1 | chr5:5344507-5345919 FORWARD LENGTH=471
Length = 470
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 37/269 (13%)
Query: 116 MCARMDSAGFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPVDRREAKNP 175
+C ++D G +++ + L E+ A++ D A V+DA+ E N
Sbjct: 104 LCEKIDGIGLIKYLIRIWDDETPLNQEVSAAIRYSPDTASMVLDAI---------EGSNY 154
Query: 176 T--------DLAWACVLILEAAVPALADPDPEIGAARLLVPXXXXXXXXXXXXXWKEAAE 227
T D+ VL++E + EI A + WK
Sbjct: 155 TPSSSGRSFDVRRVFVLLMEVLI--------EINAN---ITVDTRNRAKKLAYHWKS--- 200
Query: 228 RKGGVEWTKPPDAHAFLQHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEED- 286
K GV KP +A FL VA F + D V + +Q + +G++
Sbjct: 201 -KVGV---KPFEALVFLHLVAAFELGSEFDTEELSDYVFMIAKYKQATLVCNKIGVDRKR 256
Query: 287 MADIIEELIAKGQQLDAVNFAYEAGLQEKFPPVPLLKSYLADSKKXXXXXXXXXXXXXXX 346
+ +I+ L+ G+ + AV F YE G+ ++F P+P+LKSY+ D ++
Sbjct: 257 VGKLIKTLLDSGKPILAVKFMYECGMTDEFEPIPVLKSYIKDCRE-AALRVCVEDNYSLK 315
Query: 347 XXXXXXKKEQSVLRAVIKCIEDRKLEAEF 375
KE S L+ +IK I+D+ LE+EF
Sbjct: 316 SQNEASDKEVSALKPLIKIIKDQNLESEF 344
>AT1G31814.1 | chr1:11412985-11414406 REVERSE LENGTH=474
Length = 473
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 23/264 (8%)
Query: 116 MCARMDSAGFFGFVVARRKEVDALRAEMPPALKCCVDPAKFVMDAVADVFPVDRREAKN- 174
C + D G +++ ++ ++ E+P A++C +PA V+DA+ + + +
Sbjct: 93 FCEKNDGKGLGNYMIENSRKRLSINEELPNAIRCSENPAPLVLDAIEGSYHCSSPSSSSS 152
Query: 175 --PTDLAWACVLILEAAVPALADPDPEIGAARLLVPXXXXXXXXXXXXXWKEAAERKGGV 232
D+ VL+LEA + EI A + WK
Sbjct: 153 ARAIDVKRIFVLLLEALI--------EINAN---LTNDLRERARTIAYDWKPNI------ 195
Query: 233 EWTKPPDAHAFLQHVATFAVAEREDRGIYRRIVVSFSWRRQMPRLALTLGLEED-MADII 291
KP +A FL VA F + + S +Q + +GL+ + + ++
Sbjct: 196 -GNKPSEALGFLHLVAAFELGSLFSTEEICDYIFLISKYKQATTICKKIGLDRNRIGVLV 254
Query: 292 EELIAKGQQLDAVNFAYEAGLQEKFPPVPLLKSYLADSKKXXXXXXXXXXXXXXXXXXXX 351
++ + G+ L A+ F YE + +F PV +LK+ L +S++
Sbjct: 255 QKFLDTGRLLVAIRFIYENEMVGEFEPVSILKTSLKNSRE-AAKRVCAEGNYSLKVQNEA 313
Query: 352 XKKEQSVLRAVIKCIEDRKLEAEF 375
KE S LRAVIK ++++ +E+EF
Sbjct: 314 TDKELSALRAVIKVVKEKNIESEF 337
>AT5G27230.1 | chr5:9584255-9587838 FORWARD LENGTH=949
Length = 948
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 90/234 (38%), Gaps = 13/234 (5%)
Query: 142 EMPPALKCCVDPAKFVMDAVADVFPVDRREAKNPTDLAWACVLILEAAVPALADPDPEIG 201
++ ALKC DPAK +D + P + T+ + +++ +A +L +
Sbjct: 567 DLSNALKCTPDPAKLFLDTSMALCPTN-------TEGGYEFKMLITSASCSLLLNQLKKL 619
Query: 202 AARLLVPXXXXXXXXXXXXXWKEAAERKGGVEWTKPPDAHAFLQHVATFAVAEREDRGIY 261
++ P K A ++ +E FLQ + F +
Sbjct: 620 LPKIGHPVKGDAKKLAVYWKDKIAKSKRDQLE------VICFLQFLGIFGIVSEFKADDL 673
Query: 262 RRIVVSFSWRRQMPRLALTLGLEEDMADIIEELIAKGQQLDAVNFAYEAGLQEKFPPVPL 321
++ + W+ P L LGL++ + I+ LI G ++ A+++ Y G+ +F PV
Sbjct: 674 LGLLDNSYWQTVSPDLCQFLGLDDAIPGFIQNLIKTGHRIKAIDYIYSFGMVHRFQPVSA 733
Query: 322 LKSYLADSKKXXXXXXXXXXXXXXXXXXXXXKKEQSVLRAVIKCIEDRKLEAEF 375
+ + K ++ LRA IKCI KLE+EF
Sbjct: 734 IINDSLRITKESAEKSYREAKNESTTQVAAIDRQVRALRAAIKCISCHKLESEF 787
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,624,389
Number of extensions: 206336
Number of successful extensions: 462
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 452
Number of HSP's successfully gapped: 7
Length of query: 453
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 351
Effective length of database: 8,310,137
Effective search space: 2916858087
Effective search space used: 2916858087
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)