BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0168800 Os07g0168800|AK121813
(161 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162 146 5e-36
AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176 138 1e-33
AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169 138 2e-33
AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164 135 1e-32
AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177 126 6e-30
AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174 125 1e-29
AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171 123 4e-29
AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161 117 2e-27
AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126 102 6e-23
AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131 96 9e-21
>AT2G36320.1 | chr2:15229388-15229873 FORWARD LENGTH=162
Length = 161
Score = 146 bits (368), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 94/168 (55%), Gaps = 27/168 (16%)
Query: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---------------KVTTMAAP 55
E TPE LCVNNCGFFGSS T N+CS CY D ++ + AP
Sbjct: 4 EHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAP 63
Query: 56 VVEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPS--NRCLSCRKKVGLTG 113
V+E A + E KP ++P E P PP NRC CRK+VGLTG
Sbjct: 64 VLENYAAELEIPTTKKTEEKKPIQIPT----------EQPSPPQRPNRCTVCRKRVGLTG 113
Query: 114 FQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
F CRCG TFC +HRY E H CTFD+K AGR++IAK NP+VIA K+ KI
Sbjct: 114 FMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161
>AT4G12040.1 | chr4:7215341-7215868 FORWARD LENGTH=176
Length = 175
Score = 138 bits (347), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 100/174 (57%), Gaps = 24/174 (13%)
Query: 9 ESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV---KVTTMAAPVVEKKAFTPA 65
E+ T P P LC N CGFFGS N+CSKCYR T +A V+ P+
Sbjct: 5 ENNSTSFPPTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAAVKNSLKLPS 64
Query: 66 SS-----SKTPLE-----------PAKPDEVPAAAVEDKQAAQEPPKP--PSNRCLSCRK 107
S K PLE A+P VP AA +D+ EP +P P+NRC SC K
Sbjct: 65 CSIIAPGQKHPLEIKPAHLETVVVTAEPSSVPVAAEQDEA---EPSRPVRPNNRCFSCNK 121
Query: 108 KVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
KVG+ GF+C+CG TFC +HRY E H+C+FD+K+ GRD IAK NP+V A+K+ +I
Sbjct: 122 KVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175
>AT1G12440.1 | chr1:4241816-4242322 REVERSE LENGTH=169
Length = 168
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 17/167 (10%)
Query: 9 ESEETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDF--VKVTTMAAPVVEKKAFTPAS 66
+++ T +P P LCV CGFFGS N+CSKCYRD + T +A +K+ P
Sbjct: 5 QNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNP-- 62
Query: 67 SSKTPLEPAKPDEVPAAAVEDKQ------------AAQEPPKPPSNRCLSCRKKVGLTGF 114
+K +P + E+ + A +PPK + RCLSC KKVG+TGF
Sbjct: 63 -NKPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAPLDPPKSTATRCLSCNKKVGVTGF 121
Query: 115 QCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
+CRCG TFC THRY E+H+C FD+K R+ IAK NPVV A+K+++I
Sbjct: 122 KCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168
>AT2G27580.1 | chr2:11776640-11777131 REVERSE LENGTH=164
Length = 163
Score = 135 bits (339), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 101/159 (63%), Gaps = 12/159 (7%)
Query: 15 HTPEAPILCVNNCGFFGSSMTNNMCSKCYRDFV----KVTTMAAPVVEKKAFTPASSSKT 70
H + P LC NNCGFFGS+ T N+CSKC+RD +T + + A A++S +
Sbjct: 5 HRLQEPRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHALTQSLAAVGAAASSS 64
Query: 71 PLEPAKPDEVPAAAVE---DKQAAQEPPK---PPSN--RCLSCRKKVGLTGFQCRCGGTF 122
P P VE +K+AA EP + PP + RCL+CR++VG+TGF+CRCG F
Sbjct: 65 VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVF 124
Query: 123 CSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
C THRY E H+C+FD+K+ G+D+IAK NP+V A+K+ KI
Sbjct: 125 CGTHRYAEQHECSFDFKRMGKDKIAKANPIVKADKLEKI 163
>AT4G22820.1 | chr4:11987871-11988401 REVERSE LENGTH=177
Length = 176
Score = 126 bits (316), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 91/159 (57%), Gaps = 18/159 (11%)
Query: 20 PILCVNNCGFFGSSMTNNMCSKCYRDFV--KVTTMAAPVVEKKAFTP--------ASSSK 69
P LCV CGFFGS ++CSKCYR + T A +K+F P A
Sbjct: 19 PKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPA 78
Query: 70 TPLEPAKPDEVPAAAVEDKQA------AQEPPKPP-SNRCLSCRKKVGLTGFQCRCGGTF 122
+EP KP++ V + + A EP +P +NRCL C KKVG+ GF+C+CG TF
Sbjct: 79 VVVEP-KPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTF 137
Query: 123 CSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
C HRY E HDC+FD+K+ GR +IAK NPVV A+KI +
Sbjct: 138 CGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQRF 176
>AT1G51200.1 | chr1:18985690-18986211 FORWARD LENGTH=174
Length = 173
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 99/169 (58%), Gaps = 31/169 (18%)
Query: 17 PEAPILCVNNCGFFGSSMTNNMCSKCYRD-----------------------FVKVTTMA 53
PE P LC NNCGFFGS+ T NMCSKC++D +K T A
Sbjct: 12 PEGPKLCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTA 71
Query: 54 APV-VEKKAFTPASSSKTPLEPAKPDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLT 112
A V +E K+ P + S P +V A V ++AA+ PK PS RC +C K+VGLT
Sbjct: 72 ALVDIETKSVEPMTVSVQP----SSVQVVAEVVAPEEAAK--PKGPS-RCTTCNKRVGLT 124
Query: 113 GFQCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
GF+CRCG FC THRY + HDC+F+Y A ++ IAK NPVV AEK++KI
Sbjct: 125 GFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173
>AT3G52800.1 | chr3:19569806-19570318 FORWARD LENGTH=171
Length = 170
Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 92/167 (55%), Gaps = 16/167 (9%)
Query: 11 EETVHTPEAPILCVNNCGFFGSSMTNNMCSKCYRDF--------------VKVTTMAAPV 56
E TPE+ LCVNNCGF GSS T N+CS CY D V+ + +P
Sbjct: 4 EHRCQTPESNRLCVNNCGFLGSSATMNLCSNCYGDLCLKQQQQSSSIKSTVESSLSVSPP 63
Query: 57 VEKKAFTPASSSKTPLE-PAKPDEVP-AAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGF 114
+ + L+ P+ EVP AV ++ + NRC +CRK+VGLTGF
Sbjct: 64 SSSSSEISSPIIPPLLKNPSVKLEVPEKKAVISLPTTEQNQQQRPNRCTTCRKRVGLTGF 123
Query: 115 QCRCGGTFCSTHRYTEAHDCTFDYKKAGRDQIAKQNPVVIAEKINKI 161
+CRCG FC HRY E H C++D+K AGR++IAK NP+V A K+ KI
Sbjct: 124 KCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170
>AT3G12630.1 | chr3:4012707-4013189 FORWARD LENGTH=161
Length = 160
Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 82/140 (58%), Gaps = 16/140 (11%)
Query: 28 GFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLE--PAK----PDEVP 81
G + TNNMC KC+ + + AA VVE + S+ L PAK P E+
Sbjct: 31 GVTANPATNNMCQKCFN--ASLVSAAAGVVESGSILKRSARSVNLRSSPAKVVIRPREID 88
Query: 82 AAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKA 141
A D+Q NRC CRKKVGLTGF+CRCG FCS HRY++ HDC++DYK A
Sbjct: 89 AVKKRDQQIV--------NRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTA 140
Query: 142 GRDQIAKQNPVVIAEKINKI 161
GR+ IA++NPVV A K+ K+
Sbjct: 141 GREAIARENPVVKAAKMVKV 160
>AT4G14225.1 | chr4:8198777-8199202 FORWARD LENGTH=126
Length = 125
Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 75/145 (51%), Gaps = 27/145 (18%)
Query: 20 PILCVNNCGFFGSSMTNNMCSKCYRDFVK---VTTMAAPVVEKKAFTPASSSKTPLEPAK 76
P LC+ CGFF +S T N+CSKCY DF+K +A V KA
Sbjct: 5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLATFNVNTKA--------------- 49
Query: 77 PDEVPAAAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTF 136
+EV AQE S +C+KKVGL GF CRCG F ++HRY E H C
Sbjct: 50 AEEV---------TAQEATVLGSKGGCACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPS 100
Query: 137 DYKKAGRDQIAKQNPVVIAEKINKI 161
DYK A D +AKQNPVV +K+ ++
Sbjct: 101 DYKSAAIDVLAKQNPVVKGDKLFRL 125
>AT4G25380.1 | chr4:12975936-12976328 REVERSE LENGTH=131
Length = 130
Score = 95.5 bits (236), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 23 CVNNCGFFGSSMTNNMCSKCYRDFVKVTTMAAPVVEKKAFTPASSSKTPLEPAKPDEVPA 82
C CG +G+ + NN+CS CY+ K +P + F P + P +
Sbjct: 10 CEGGCGLYGTRVNNNLCSLCYK---KSVLQHSPALR---FEPETEQSQCCPPTN-----S 58
Query: 83 AAVEDKQAAQEPPKPPSNRCLSCRKKVGLTGFQCRCGGTFCSTHRYTEAHDCTFDYKKAG 142
AVE+ EP K RC C++KVG+ GF+CRCG FC +HRY E H C FDYK++G
Sbjct: 59 PAVEE-----EPVK--KRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSG 111
Query: 143 RDQIAKQNPVVIAEKINKI 161
R +A Q P++ A+K+ +
Sbjct: 112 RLALATQLPLIRADKLQRF 130
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.128 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,138,936
Number of extensions: 176971
Number of successful extensions: 816
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 806
Number of HSP's successfully gapped: 11
Length of query: 161
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 70
Effective length of database: 8,611,713
Effective search space: 602819910
Effective search space used: 602819910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)