BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0160600 Os07g0160600|AK065047
(479 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446 496 e-140
AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437 493 e-139
AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459 483 e-136
AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463 456 e-128
AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126 112 3e-25
>AT2G35860.1 | chr2:15059859-15061810 FORWARD LENGTH=446
Length = 445
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 256/421 (60%), Positives = 298/421 (70%), Gaps = 22/421 (5%)
Query: 61 DSHYTXXXXXXXXXXXXQTLEDAVGKGNVTIFAPRNEALERDLDPEFRRFLLEPRNLRSL 120
DSHYT QTLE+AVGK N+TIFAPRN+ALER+LDP F+ FLLEPRNL+SL
Sbjct: 45 DSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFKSFLLEPRNLKSL 104
Query: 121 QRLLLFHVLPARLHAXXXXXXXXXXXHPTLSGERVDLSA--SPMRVGAAAVTRPDAVVRP 178
Q LL+FH+LP R+ + H TLS + + L+ + ++V +A + RPD V+RP
Sbjct: 105 QSLLMFHILPKRITSPQWPSLSHH--HRTLSNDHLHLTVDVNTLKVDSAEIIRPDDVIRP 162
Query: 179 DGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRXXXXXXXXXXXXXX 238
DG+IHGIERLL+PRSVQEDFNRRRSL +ISAV+P GAPEVDPRTHR
Sbjct: 163 DGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLKKPSPAVPAGAPP 222
Query: 239 XXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNELADILVNLTS 298
I+DAM + HF+G +QVKDFI TLL YGGYNE+ADILVNLTS
Sbjct: 223 VLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGYNEMADILVNLTS 282
Query: 299 LATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEYQTEESMYNA 358
LATEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH+IPEYQTEESMYNA
Sbjct: 283 LATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNA 342
Query: 359 VRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDGRISVQGIDAVLFP 418
VRRFGKV+YD+LR P+KV A+EADGSVKFGHG+GSAYLFDPDIYTDGRISVQGID VLFP
Sbjct: 343 VRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFP 402
Query: 419 PKDTATXXXXXXXXXXXXXXXXXXXXXXXHSKSKLRRGKLLEGACQVMGFLGRRSRFASC 478
++T SK RRGKL+E AC++MG SRF C
Sbjct: 403 KEETPATEIKPAAPVVKKV-------------SKSRRGKLMEVACRMMG-----SRFIPC 444
Query: 479 Q 479
Q
Sbjct: 445 Q 445
>AT3G52370.1 | chr3:19417549-19419549 FORWARD LENGTH=437
Length = 436
Score = 493 bits (1268), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/419 (58%), Positives = 295/419 (70%), Gaps = 23/419 (5%)
Query: 61 DSHYTXXXXXXXXXXXXQTLEDAVGKGNVTIFAPRNEALERDLDPEFRRFLLEPRNLRSL 120
DSHYT QTLE+AVG+ N+TIFAPRN+ALE++LDPEF+ FLL+P+NL+SL
Sbjct: 41 DSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALEKNLDPEFKSFLLQPKNLKSL 100
Query: 121 QRLLLFHVLPARLHAXXXXXXXXXXXHPTLSGERVDLSASPMRVGAAAVTRPDAVVRPDG 180
Q LL+FH+LP R+ + H TLS + + + +V +A +T+PD + RPDG
Sbjct: 101 QSLLMFHILPKRITSPQFSSAVVS--HRTLSNDHLHFTNG--KVNSAEITKPDDLTRPDG 156
Query: 181 VIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRXXXXXXXXXXXXXXXX 240
+IHGIERLL+PRSVQEDFNRRRSL +I+AVLP GAPEVDPRTHR
Sbjct: 157 IIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEVDPRTHRLKKKPAPIPAGAPPVL 216
Query: 241 XIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNELADILVNLTSLA 300
++DAM +HHF+G +QVKDFI TLL YGGYNE+ADILVNLTSLA
Sbjct: 217 PVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLA 276
Query: 301 TEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEYQTEESMYNAVR 360
TEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH+IPEYQTEESMYN+VR
Sbjct: 277 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNSVR 336
Query: 361 RFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDGRISVQGIDAVLFPPK 420
RFGK+RYD+LR P+KV A+EADGSVKFGHG+GSAYLFDPDIYTDGRISVQGID VLFP +
Sbjct: 337 RFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPEE 396
Query: 421 DTATXXXXXXXXXXXXXXXXXXXXXXXHSKSKLRRGKLLEGACQVMGFLGRRSRFASCQ 479
T K RRGKL+E AC ++G S+F +CQ
Sbjct: 397 KTPVEKKTGVPVVK--------------KAPKPRRGKLMEVACTMLG-----SQFPTCQ 436
>AT5G06390.1 | chr5:1952939-1955047 FORWARD LENGTH=459
Length = 458
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/422 (59%), Positives = 289/422 (68%), Gaps = 19/422 (4%)
Query: 61 DSHYTXXXXXXXXXXXXQTLEDAVGKGNVTIFAPRNEALERDLDPEFRRFLLEPRNLRSL 120
DS YT QTLEDAVG+ N+TIFAPRNEALERDLDPEF+RFLLEP NL+SL
Sbjct: 53 DSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPEFKRFLLEPGNLKSL 112
Query: 121 QRLLLFHVLPARLHAXXX-XXXXXXXXHPTLSGERVDLSASPMR--VGAAAVTRPDAVVR 177
Q LL+FH++P R+ + H TL ++V LS + V A + RPD + R
Sbjct: 113 QTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSNGQGKKMVDLAEIIRPDDLTR 172
Query: 178 PDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRXXXXXXXXXXXXX 237
PDG+IHGIERLL+PRSVQEDFNRRRSL +ISAVLP GAPEVDPRT+R
Sbjct: 173 PDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGAPEVDPRTNRLKKPAAPVPAGSP 232
Query: 238 XXXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNELADILVNLT 297
I AM +HHFDG +QVKDFI TLL YGGYNE+ADILVNLT
Sbjct: 233 PALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLT 292
Query: 298 SLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEYQTEESMYN 357
SLATEMGRLVSEGYVLTVLAPNDEAMA+LTTDQLSEPG+PE I+YYH+IPEYQTEESMYN
Sbjct: 293 SLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIVYYHIIPEYQTEESMYN 352
Query: 358 AVRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDGRISVQGIDAVLF 417
+VRRFGKV++DTLR P+KV A+EADGSVKFG GE SAYLFDPDIYTDGRISVQGID VLF
Sbjct: 353 SVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAYLFDPDIYTDGRISVQGIDGVLF 412
Query: 418 PPKDTATXXXXXXXXXXXXXXXXXXXXXXXHSKSKLRRGKLLEGACQVMGFLGRRSRFAS 477
P ++ + RRGKLLE AC ++G G+ + +
Sbjct: 413 PQEEEVVESVKKPVKKIV----------------QPRRGKLLEVACSMLGAFGKDTYLSK 456
Query: 478 CQ 479
C+
Sbjct: 457 CR 458
>AT3G11700.1 | chr3:3698992-3700971 FORWARD LENGTH=463
Length = 462
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/428 (57%), Positives = 287/428 (67%), Gaps = 25/428 (5%)
Query: 61 DSHYTXXXXXXXXXXXXQTLEDAVGKGNVTIFAPRNEALERDLDPEFRRFLLEPRNLRSL 120
DS YT QTLEDAVG+ N+TIFAPRNEALERDLDP+F+RFLL+P NL+SL
Sbjct: 50 DSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLDPDFKRFLLQPGNLKSL 109
Query: 121 QRLLLFHVLPARLHAXXX-XXXXXXXXHPTLSGERVDLSASPMR-------VGAAAVTRP 172
Q LLL H++P R+ + H TL ++V L S ++ V +A +TRP
Sbjct: 110 QTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQV-LHLSKLKGTNGKRLVNSAVITRP 168
Query: 173 DAVVRPDGVIHGIERLLVPRSVQEDFNRRRSLAAISAVLPTGAPEVDPRTHRXXXXXXXX 232
D + RPDG+IHGIERLL+PRSVQEDFNRRR+L +ISAVLP GAPE+DPRT+R
Sbjct: 169 DDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGAPEIDPRTNRLKKSATAV 228
Query: 233 XXXXXX--XXXIWDAMXXXXXXXXXXXXXXXXXKHHFDGHSQVKDFIQTLLLYGGYNELA 290
I AM HF+G +QVKDFI TLL YGGYNE+A
Sbjct: 229 SVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQVKDFIHTLLHYGGYNEMA 288
Query: 291 DILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMARLTTDQLSEPGSPENILYYHMIPEYQ 350
DILVNLTSLATEMGRLVSEGYVLTVLAPNDEAM +LTTDQLSEPG+PE I+YYH+IPEYQ
Sbjct: 289 DILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSEPGAPEQIMYYHIIPEYQ 348
Query: 351 TEESMYNAVRRFGKVRYDTLRLPNKVTAREADGSVKFGHGEGSAYLFDPDIYTDGRISVQ 410
TEESMYN+VRRFGKV+Y+TLR P+KV A+EADGSVKFG G+ SAYLFDPDIYTDGRISVQ
Sbjct: 349 TEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRSAYLFDPDIYTDGRISVQ 408
Query: 411 GIDAVLFPPKDTATXXXXXXXXXXXXXXXXXXXXXXXHSKSKLRRGKLLEGACQVMGFLG 470
GID VLFP + + RRGKLLE AC ++G +G
Sbjct: 409 GIDGVLFPEEKEEETVKKPTGPVKKVV--------------QPRRGKLLEVACSMLGAIG 454
Query: 471 RRSRFASC 478
+ S + C
Sbjct: 455 KDSYLSRC 462
>AT5G05650.1 | chr5:1686532-1686909 REVERSE LENGTH=126
Length = 125
Score = 112 bits (281), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 4/90 (4%)
Query: 329 DQLSEPGSPENILYYHMIPEYQTEESMYNAVRRFGKVRYDTLRLPNKVTAREADGSVKFG 388
DQLSE + I YYH+IPEYQTE+S Y VRR G +++DT P+ ++ARE S+KFG
Sbjct: 2 DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 57
Query: 389 HGEGSAYLFDPDIYTDGRISVQGIDAVLFP 418
G S L+DPDIYTDG+IS+QG+ VLFP
Sbjct: 58 DGVWSGCLYDPDIYTDGKISIQGVGGVLFP 87
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,208,756
Number of extensions: 247979
Number of successful extensions: 526
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 515
Number of HSP's successfully gapped: 5
Length of query: 479
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 377
Effective length of database: 8,310,137
Effective search space: 3132921649
Effective search space used: 3132921649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)