BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0159900 Os07g0159900|AK062586
(256 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240 140 1e-33
AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402 132 1e-31
AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335 125 3e-29
AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369 124 7e-29
AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385 121 4e-28
AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418 115 2e-26
AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275 106 1e-23
AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403 102 1e-22
AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315 102 2e-22
AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429 99 3e-21
AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274 95 3e-20
AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391 94 7e-20
AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201 79 2e-15
>AT5G06470.1 | chr5:1974659-1975378 REVERSE LENGTH=240
Length = 239
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Query: 93 LREFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRD 152
L EF CPPGGE +VV YTT LR +RKTFE C VR LLEN V ++ERDVSMD R+
Sbjct: 76 LLEFKENCPPGGEDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFRE 135
Query: 153 ELWSVTGEKAVPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDA 212
E+W + G K PRLF+RGR +GGA +V+AL+E+G+L LL S + C++
Sbjct: 136 EMWRLLGGKVTSPRLFIRGRYIGGAEEVVALNENGKLKKLLQGISQVD-------SPCES 188
Query: 213 CGGLRFVVCGECDGSRKVF 231
C RF++C C+GS ++
Sbjct: 189 CENERFLICSSCNGSTRLL 207
>AT5G01420.1 | chr5:174886-176091 REVERSE LENGTH=402
Length = 401
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 90/143 (62%), Gaps = 12/143 (8%)
Query: 93 LREFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRD 152
L EF RCPPGGE +VV YTTTLRGIRKTF+DCN +R LL++ V + ERDVSM R R+
Sbjct: 243 LLEFEERCPPGGEESVVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREYRE 302
Query: 153 ELWSVTGEKA--VPPRLFVRGRDVGGAAQVLALHEDGRLLALLS--PGSNKNRSXXXXXX 208
EL ++ + +PP LFV+GR +GGA +VL LHE G+ L P + R
Sbjct: 303 ELRRISAAETEVLPPVLFVKGRCIGGAQRVLGLHEQGKFKILFEGIPITGDER------- 355
Query: 209 KCDACGGLRFVVCGECDGSRKVF 231
C C G RF++C C GSR++
Sbjct: 356 -CRRCDGFRFLMCDGCRGSRRII 377
>AT4G10630.1 | chr4:6566625-6567629 REVERSE LENGTH=335
Length = 334
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 92/143 (64%), Gaps = 8/143 (5%)
Query: 95 EFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDEL 154
+F CPPGGE VV+YTT+LRG+R+TFE CN VRA +E+ V ERDVSMDR R+EL
Sbjct: 165 KFERICPPGGENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREEL 224
Query: 155 WSVTGEK-------AVPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXX 207
S+ ++ A+PPR+FV+GR +GG +VL L E+G L+S G + ++
Sbjct: 225 VSLMAKRVGDEGVAALPPRVFVKGRYIGGGEEVLRLVEEGSFGELIS-GIPRKKAGGCES 283
Query: 208 XKCDACGGLRFVVCGECDGSRKV 230
CD CGGL F+ C C+GS K+
Sbjct: 284 GACDGCGGLFFLPCFRCNGSCKM 306
>AT1G64500.1 | chr1:23953270-23954376 FORWARD LENGTH=369
Length = 368
Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 94/140 (67%), Gaps = 3/140 (2%)
Query: 93 LREFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRD 152
LREFP +CPPGG +++YTT+L+G+R+T+EDC VRA++E V ERDVS+D G+
Sbjct: 199 LREFPEKCPPGGGEGLIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLS 258
Query: 153 ELWSVTGEKA--VPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKC 210
EL + ++A PPR+FV+GR +GGAA+V A++E+G+L +L + R C
Sbjct: 259 ELKELLQDEASVAPPRVFVKGRYLGGAAEVTAMNENGKLGRVLR-WARVERVGEEGRLTC 317
Query: 211 DACGGLRFVVCGECDGSRKV 230
+ CGG R++ C EC GS KV
Sbjct: 318 EGCGGARWLPCFECGGSCKV 337
>AT5G03870.1 | chr5:1035813-1036967 REVERSE LENGTH=385
Length = 384
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 99/166 (59%), Gaps = 9/166 (5%)
Query: 93 LREFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRD 152
L +FP +CPPGGE +VV+Y TTLRGIRKTFEDCN VR++L++ +V F ERDVSM ++
Sbjct: 224 LEKFPEKCPPGGEHSVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKE 283
Query: 153 ELWSVTGEKAVP-PRLFVRGRDVGGAAQVLALHEDGRLLALLS--PGSNKNRSXXXXXXK 209
E+ + G K V P +FV+GR VG +V+ L E+G+L LL P +
Sbjct: 284 EIRGIMGTKHVKIPAVFVKGRMVGSVEEVMRLEEEGKLGILLEGIPAAR------LGGSC 337
Query: 210 CDACGGLRFVVCGECDGSRKVFDXXXXXXXXXXXXXXXXLVMCALC 255
C CGG+RF++C C+GS KV + LV+C +C
Sbjct: 338 CRGCGGMRFMMCVVCNGSCKVREEEKKSMVKCLKCNENGLVLCPIC 383
>AT3G57070.1 | chr3:21124174-21125427 FORWARD LENGTH=418
Length = 417
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 102 PGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVTGEK 161
PG E +VLY TTLRGIRKT+EDC VRA+L + V+ ERD+SMD R EL SV G
Sbjct: 264 PGTEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDISMDSKYRKELQSVLGAA 323
Query: 162 AVP---PRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDACGGLRF 218
P P++F+RG +GG +++ L++ G L +L K+ C +CG RF
Sbjct: 324 EKPVCLPQVFIRGTHIGGVEEIMQLNDGGELAEML-----KDFPACERLGTCRSCGDARF 378
Query: 219 VVCGECDGSRKVFDXXXXXXXXXXXXXXXXLVMCALC 255
V C CDGS KVF+ LV C +C
Sbjct: 379 VPCTNCDGSTKVFEEQDERFKRCPKCNENGLVRCRVC 415
>AT5G13810.1 | chr5:4455769-4456593 FORWARD LENGTH=275
Length = 274
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 102 PGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVTGEK 161
PG E +V+Y T+LRGIR+T+EDC VR + V ERDVSMD R EL GEK
Sbjct: 123 PGTEDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQIAMGEK 182
Query: 162 AVP-PRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDACGGLRFVV 220
+V P++F+ G+ VGGA + +L E G L +L K C CG +RFV
Sbjct: 183 SVSLPQVFIMGKYVGGADVIKSLFEIGELAKIL-----KEFPMRQPGFVCHCCGDIRFVP 237
Query: 221 CGECDGSRKVFD 232
C C GS+K+FD
Sbjct: 238 CSNCSGSKKLFD 249
>AT2G41330.1 | chr2:17227067-17228275 FORWARD LENGTH=403
Length = 402
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 104 GEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVTGEK-- 161
E +V+Y T+LRGIRKT+EDC VRA+L VA +ERD+SMD R EL + GE+
Sbjct: 252 NENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQNALGEEKP 311
Query: 162 AVPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDACGGLRFVVC 221
P++F+RG +GG ++ L++ G L +L K+ CD+CG RFV C
Sbjct: 312 VCLPQVFIRGVRIGGIEEIKILNDGGELAEML-----KDFPACESIGACDSCGDARFVPC 366
Query: 222 GECDGSRKVFD 232
C GS KVF+
Sbjct: 367 TNCGGSTKVFE 377
>AT1G32760.1 | chr1:11858251-11859195 FORWARD LENGTH=315
Length = 314
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 89/145 (61%), Gaps = 7/145 (4%)
Query: 92 QLREFPARCPPGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLR 151
+L E R GGE VV+YTT+LRG+R+TFE CN VRA +E+ V ERDVSMDRG R
Sbjct: 147 KLAEESERLCDGGENRVVIYTTSLRGVRRTFEACNAVRAAIESFGVVVCERDVSMDRGFR 206
Query: 152 DELWSVTGEKA----VPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXX 207
+EL ++ ++ +PPR+FV+G+ +GGA +V+ L E+G L LL R
Sbjct: 207 EELSNLMAVESTAAVLPPRVFVKGKYIGGAEEVMRLVEEGLLGELL---KEIPRKKDRCG 263
Query: 208 XKCDACGGLRFVVCGECDGSRKVFD 232
C CGGL F+ C C+GS KV +
Sbjct: 264 GGCGGCGGLAFLPCSGCNGSCKVVE 288
>AT3G28850.1 | chr3:10848669-10849955 FORWARD LENGTH=429
Length = 428
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 79/133 (59%), Gaps = 6/133 (4%)
Query: 104 GEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVTGEK-- 161
G+ V+LY T+LRGIRKT+E+ VR +L++L + ERDVSM G +DEL + GEK
Sbjct: 249 GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFN 308
Query: 162 ----AVPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDACGGLR 217
PR+F+ + +GGA ++ L+EDG+L LL + +C+ACG +R
Sbjct: 309 KGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVR 368
Query: 218 FVVCGECDGSRKV 230
FV C C GS KV
Sbjct: 369 FVPCETCSGSCKV 381
>AT5G58530.1 | chr5:23660428-23661249 FORWARD LENGTH=274
Length = 273
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 102 PGGEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVTG-- 159
PG E ++V+Y T+LR +R TFE C V ++L + V ERD+SMD EL + G
Sbjct: 109 PGAEKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQRIFGKD 168
Query: 160 ------EKAVP--PRLFVRGRDVGGAAQVLALHEDGRL------LALLSPGSNKNRSXXX 205
+ P PR+F+ GR +GGA +V LHE G L L + PG
Sbjct: 169 QNQNQNQAKTPKLPRVFIGGRYIGGAEEVKQLHEIGELKKLVQELPKIEPGV-------- 220
Query: 206 XXXKCDACGGLRFVVCGECDGSRKV 230
C+ CGG RFV C +C GS KV
Sbjct: 221 ----CEMCGGHRFVPCKDCHGSHKV 241
>AT5G39865.1 | chr5:15965560-15966732 REVERSE LENGTH=391
Length = 390
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 104 GEGAVVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSV------ 157
G+ VVLY T+LRGIRKT+EDC +R +L++L + ERDVSM G +DEL +
Sbjct: 223 GKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFN 282
Query: 158 TGEKAVPPRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSXXXXXXKCDACGGLR 217
G PR+F+ + +GG ++ L+E+G L L+ +C+ACG +R
Sbjct: 283 NGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVR 342
Query: 218 FVVCGECDGSRKVF 231
FV C C GS K++
Sbjct: 343 FVPCETCSGSCKLY 356
>AT3G11773.2 | chr3:3722989-3723659 REVERSE LENGTH=201
Length = 200
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 8/105 (7%)
Query: 127 GVRALLENLDVAFQERDVSMDRGLRDELWSVTGEKAVPPRLFVRGRDVGGAAQVLALHED 186
G ++ + +F+ERDVSMD ++E+W + GE+ PPRLF++ + +GGA +V++L+E+
Sbjct: 78 GQDSVASSQQASFRERDVSMDCEYKEEMWRLLGEQVTPPRLFIKCKYIGGADEVVSLNEN 137
Query: 187 GRLLALLSP-GSNKNRSXXXXXXKCDACGGLRFVVCGECDGSRKV 230
+L LL S K+R +C+ C RF++C +C+G +V
Sbjct: 138 EKLKKLLEVFSSAKSR-------QCEMCENERFLICSKCNGRSRV 175
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.142 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,119,480
Number of extensions: 141575
Number of successful extensions: 323
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 302
Number of HSP's successfully gapped: 13
Length of query: 256
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 160
Effective length of database: 8,474,633
Effective search space: 1355941280
Effective search space used: 1355941280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)