BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0141600 Os07g0141600|AK103156
(484 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60170.1 | chr1:22193008-22195177 FORWARD LENGTH=486 494 e-140
AT1G70400.3 | chr1:26531399-26533126 REVERSE LENGTH=275 174 1e-43
AT5G27120.1 | chr5:9541287-9543684 FORWARD LENGTH=534 93 3e-19
AT3G05060.1 | chr3:1413174-1415564 REVERSE LENGTH=534 93 3e-19
AT5G27140.1 | chr5:9548542-9550597 FORWARD LENGTH=446 87 2e-17
AT1G56110.1 | chr1:20984544-20986893 REVERSE LENGTH=523 73 4e-13
AT3G12860.1 | chr3:4091678-4093921 FORWARD LENGTH=500 70 2e-12
>AT1G60170.1 | chr1:22193008-22195177 FORWARD LENGTH=486
Length = 485
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 279/485 (57%), Positives = 319/485 (65%), Gaps = 3/485 (0%)
Query: 1 MASLADSFLADLDELSDXXXXXXXXXXXXVXXXXXXXXXXXXXXSLNYDDLDSVSKLQKT 60
MA+L DSFLADLDELSD +LNYDDLD+VSKLQK+
Sbjct: 1 MATLEDSFLADLDELSDNEAELDENDGDVGKEEEDVDMDMADLETLNYDDLDNVSKLQKS 60
Query: 61 QCYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDFNALSVDXXXXXXXXXXXXRDK 120
Q Y DIM KVE+AL K +D + +G++LE+DPEY+LIVD N LSVD +DK
Sbjct: 61 QRYADIMHKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIVIVHNFIKDK 120
Query: 121 YRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPL 180
Y+LKF ELESLVHHPIDYA VV+KIGNE DL LVDL LLPSAIIMVVSVTA TT G L
Sbjct: 121 YKLKFQELESLVHHPIDYACVVKKIGNETDLALVDLADLLPSAIIMVVSVTALTTKGSAL 180
Query: 181 SEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASKXXXXXXXXX 240
E+ L K +EAC+RAL LD+A+KKVL+FVES+MG IAPNLSAIVGSAVA+K
Sbjct: 181 PEDVLQKVLEACDRALDLDSARKKVLEFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS 240
Query: 241 XXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTSACRLIAAKS 300
KMPACNVQ+LG K+KNLAGFSSATSQ RVGYLEQTE++QSTPP L+ A RL+AAKS
Sbjct: 241 ALAKMPACNVQVLGHKRKNLAGFSSATSQSRVGYLEQTEIYQSTPPGLQARAGRLVAAKS 300
Query: 301 TLAARINSIRGDPTGKAGRNLLEEIRKKIEKWQEXXXXXXXXXXXXXDSEPXXXXXXXXX 360
TLAAR+++ RGDP G +G+ EEIRKKIEKWQE DSEP
Sbjct: 301 TLAARVDATRGDPLGISGKAFREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRRL 360
Query: 361 XXXXXXYAQTDMMKLANRMQFGVPEESSXXXXXXXXXXXXXXXXSGKLRVSAAQSKLA-- 418
Y TDM KLANRM FG PEESS S +LRVS+ SKL
Sbjct: 361 RKMKERYQVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKIN 420
Query: 419 AKVAKKFKEKSYXXXXXXXXXXXXXXFTPVQGIELSNPQSHGNLLGSGTQSTYFSETGTF 478
AKVAKK KE+ Y FTPVQGIEL NPQ LGSGTQSTYFSE+GTF
Sbjct: 421 AKVAKKLKERQYAGGATTSGLTSSLAFTPVQGIELCNPQQALG-LGSGTQSTYFSESGTF 479
Query: 479 SKIKR 483
SK+K+
Sbjct: 480 SKLKK 484
>AT1G70400.3 | chr1:26531399-26533126 REVERSE LENGTH=275
Length = 274
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 115/160 (71%), Gaps = 11/160 (6%)
Query: 45 SLNYDDLDSVSKLQKTQCYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDFNALSV 104
+L YDDLDSVSKLQK++ Y DIMQ+VE+AL+ GS+LE +LIVD L V
Sbjct: 8 TLTYDDLDSVSKLQKSRRYADIMQQVEEALE--------GSVLEYK---KLIVDCKQLLV 56
Query: 105 DXXXXXXXXXXXXRDKYRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAI 164
D RDKYR+KF ELE LV HPIDYARVV++IGNE+DL LVDLEGLLPSA+
Sbjct: 57 DIENEIVIVQNFIRDKYRVKFQELELLVPHPIDYARVVKRIGNEMDLKLVDLEGLLPSAM 116
Query: 165 IMVVSVTASTTNGKPLSEENLAKTIEACERALTLDAAKKK 204
IMV+ VTA TT G L E+ L KTI+AC+RAL LD+A+KK
Sbjct: 117 IMVLLVTALTTKGNQLPEDVLLKTIDACDRALDLDSARKK 156
>AT5G27120.1 | chr5:9541287-9543684 FORWARD LENGTH=534
Length = 533
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 118 RDKYRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNG 177
R+ + FPEL +V I YA+ V+ +GN I+ +D +L I + A + G
Sbjct: 182 REWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMG 241
Query: 178 KPLSEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASKXXXXXX 237
+S+ +L E C++ L+L + ++ D+++SRM IAPNL+A+VG V ++
Sbjct: 242 TEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGG 301
Query: 238 XXXXXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTSACRLIA 297
K P VQ+LGA+K + + + G + V P + R +A
Sbjct: 302 SLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLA 361
Query: 298 AKSTLAARINSIRGD 312
AKS LA R +++ GD
Sbjct: 362 AKSVLAIRCDAL-GD 375
>AT3G05060.1 | chr3:1413174-1415564 REVERSE LENGTH=534
Length = 533
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 118 RDKYRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNG 177
R+ Y FPEL ++ I YA+ V+ +GN ++ +D +L I + A + G
Sbjct: 183 REWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMG 242
Query: 178 KPLSEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASKXXXXXX 237
+S+ +L E C++ L+L + ++ D+++SRM IAPNL+A+VG V ++
Sbjct: 243 TEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGG 302
Query: 238 XXXXXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTSACRLIA 297
K P VQ+LGA+K + + + G + + P + R +A
Sbjct: 303 SLLNLSKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASLVGQAAPKHKGKISRSLA 362
Query: 298 AKSTLAARINSIRGD 312
AK+ LA R++++ GD
Sbjct: 363 AKTVLAIRVDAL-GD 376
>AT5G27140.1 | chr5:9548542-9550597 FORWARD LENGTH=446
Length = 445
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%)
Query: 121 YRLKFPELESLVHHPIDYARVVQKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTNGKPL 180
Y L FPEL ++V I YA+VV+ +GN I+ +D +L + + + + +
Sbjct: 155 YGLHFPELANIVQDNILYAKVVKLMGNRINAATLDFSEILADEVEAELKEASMVSTRTEV 214
Query: 181 SEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASKXXXXXXXXX 240
S+ +L E C++ L++ K + D ++++M +IAPNL+A+VG V ++
Sbjct: 215 SDLDLMHIQELCDQVLSIAEDKTLLCDDLKNKMNKIAPNLTALVGELVGARLISHCGSLW 274
Query: 241 XXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTSACRLIAAKS 300
K+P +Q+LGA+K + + + G + + + P + R +AAKS
Sbjct: 275 NLSKLPWSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARSLAAKS 334
Query: 301 TLAARINS 308
LA R ++
Sbjct: 335 ALAIRCDA 342
>AT1G56110.1 | chr1:20984544-20986893 REVERSE LENGTH=523
Length = 522
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 8/221 (3%)
Query: 118 RDKYRLKFPELESLVHHPIDYARVVQKIGNEIDLT------LVDLEGLLPSAIIMVVSVT 171
R+ Y FPEL +V+ YARV + I ++ LT L ++ G A ++ +
Sbjct: 193 REWYSWHFPELVKIVNDNYLYARVSKMIDDKSKLTEDHIPMLTEVLGDEDKAKEVIEAGK 252
Query: 172 ASTTNGKPLSEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASK 231
AS G LS +L ++ + L +KK+ D++ ++M IAPNL+A++G V ++
Sbjct: 253 ASM--GSDLSPLDLINVQTFAQKVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGAR 310
Query: 232 XXXXXXXXXXXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTS 291
K P+ +Q+LGA+K + + + G + + +
Sbjct: 311 LISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGR 370
Query: 292 ACRLIAAKSTLAARINSIRGDPTGKAGRNLLEEIRKKIEKW 332
R +A K ++A+RI+ T G L E++ +++E +
Sbjct: 371 IARYLANKCSIASRIDCFADGATTAFGEKLREQVEERLEFY 411
>AT3G12860.1 | chr3:4091678-4093921 FORWARD LENGTH=500
Length = 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 8/221 (3%)
Query: 118 RDKYRLKFPELESLVHHPIDYARVVQKIGNEIDLT------LVDLEGLLPSAIIMVVSVT 171
R+ Y FPEL +V+ YA+V + I ++ L+ L + G A ++ +
Sbjct: 193 REWYSWHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKAREVIEAGK 252
Query: 172 ASTTNGKPLSEENLAKTIEACERALTLDAAKKKVLDFVESRMGRIAPNLSAIVGSAVASK 231
AS G+ LS +L +R + L +KK+ D++ ++M IAPNL+A++G V ++
Sbjct: 253 ASM--GQDLSPVDLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGAR 310
Query: 232 XXXXXXXXXXXXKMPACNVQLLGAKKKNLAGFSSATSQFRVGYLEQTEVFQSTPPALRTS 291
K P+ +Q+LGA+K + + + G + + +
Sbjct: 311 LISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGR 370
Query: 292 ACRLIAAKSTLAARINSIRGDPTGKAGRNLLEEIRKKIEKW 332
R +A K ++A+RI+ + T G L E++ ++++ +
Sbjct: 371 IARFLANKCSIASRIDCFSDNSTTAFGEKLREQVEERLDFY 411
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,042,706
Number of extensions: 219462
Number of successful extensions: 435
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 429
Number of HSP's successfully gapped: 7
Length of query: 484
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 382
Effective length of database: 8,310,137
Effective search space: 3174472334
Effective search space used: 3174472334
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)