BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0133500 Os07g0133500|AK106244
(462 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G10020.1 | chr1:3269939-3271732 REVERSE LENGTH=462 403 e-113
AT4G29310.1 | chr4:14437892-14439609 REVERSE LENGTH=425 316 2e-86
AT3G19680.1 | chr3:6840448-6842107 FORWARD LENGTH=492 300 1e-81
AT1G50040.1 | chr1:18542236-18543823 FORWARD LENGTH=461 269 3e-72
AT5G17640.1 | chr5:5811047-5812429 REVERSE LENGTH=433 214 6e-56
>AT1G10020.1 | chr1:3269939-3271732 REVERSE LENGTH=462
Length = 461
Score = 403 bits (1036), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/478 (46%), Positives = 289/478 (60%), Gaps = 48/478 (10%)
Query: 1 MDPCPFVRVLVGNLSLKMXXXXXXXXXXXXXXXSTSPCYCKIRLNKLPYQTXXXXXXXXX 60
MDPCPF+R+ +GNL+LK+ S C+CKI+L P QT
Sbjct: 1 MDPCPFIRLTIGNLALKVPLAAKTTSSVVHPSSSP--CFCKIKLKNFPPQTAAIPYIPLE 58
Query: 61 XXXXXXXXXXXXXXXXXXXXFHLSKADLDRLTAKPSLFGSRTARLKIVVYAXXXXXXXXX 120
FHLS +D+ RL ++ S+F S+ LKI++Y
Sbjct: 59 TTQFPEIQTLAAT-------FHLSSSDIQRLASR-SIFTSKPC-LKILIYTGRAGAACGV 109
Query: 121 XXXXXXXXXKVVIPLDLKGASAKPVVYHSSWICIGKRGRKPSSVSAANAQLNITVRAEPD 180
KV +PLDL G +KP V+H+ WI +GK K S+++AQ ++ V+AEPD
Sbjct: 110 HSGRLLA--KVSVPLDLSGTQSKPCVFHNGWISVGKGAGK----SSSSAQFHLNVKAEPD 163
Query: 181 PRFVFEFDGEPECSPQVLQVQGSMKQPMFTCKFSCRSNSD--LRSRSMPADMGSGGRNWL 238
PRFVF+FDGEPECSPQV+Q+QG+++QP+FTCKFSCR D RSRS+P + S R+WL
Sbjct: 164 PRFVFQFDGEPECSPQVVQIQGNIRQPVFTCKFSCRHTGDRTQRSRSLPTET-SVSRSWL 222
Query: 239 TAFGSDRERAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSKSNPGAWLVLRP 298
+FGS+RER GKERKGWS+TVHDLSGSPVA+AS+VTPFVASPGTDRVS+SNPG+WL+LRP
Sbjct: 223 NSFGSERERPGKERKGWSITVHDLSGSPVAMASIVTPFVASPGTDRVSRSNPGSWLILRP 282
Query: 299 GDGTWKPWGRLECWRERGAGAAAGDSLGYRFELVLPDPTGMGVGVSVAESTIPASKGGRF 358
GD TW+PWGRLE WRERG A D LGYRFEL+ PD + G G+ +AESTI + +GG+F
Sbjct: 283 GDCTWRPWGRLEAWRERG---GATDGLGYRFELI-PDGSS-GAGIVLAESTISSHRGGKF 337
Query: 359 AIDLTATQQFXXXXXXXXXXXXXXD-----------------------YGMWPFGSCRGF 395
+I+L ++ YG+WP+ +GF
Sbjct: 338 SIELGSSPSSSSPTSVVNRSRSRRGGSSGSGGGASPANSPRGGSGDYGYGLWPWNVYKGF 397
Query: 396 VMSAAVQGEGKCSRPAVEVGVQNVGCXXXXXXXXXXXXXXXXSMDACRLFSHRLRREL 453
VMSA+V+GEGKCS+P VEV VQ+V C SMDACRLF+ R+R+EL
Sbjct: 398 VMSASVEGEGKCSKPCVEVSVQHVSCMEDAAAYVALSAAIDLSMDACRLFNQRMRKEL 455
>AT4G29310.1 | chr4:14437892-14439609 REVERSE LENGTH=425
Length = 424
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/461 (40%), Positives = 252/461 (54%), Gaps = 54/461 (11%)
Query: 1 MDPCPFVRVLVGNLSLKMXXXXXXXXXXXXXXXSTSPCYCKIRLNKLPYQTXXXXXXXXX 60
MDPCPFVR+ + +L+L++ S++PCYCK+R+ P Q
Sbjct: 1 MDPCPFVRLTIDSLALRLPETATNKQIGGEVHPSSTPCYCKLRIKHFPSQ------KALL 54
Query: 61 XXXXXXXXXXXXXXXXXXXXFHLSKADLDRLTAKPSLFGSRTARLKIVVYAXXXXXXXXX 120
FHL + R++ K L++ VYA
Sbjct: 55 PLSSFSDASSPPESSTSAPGFHLDADAIRRISGK-------KISLRVSVYAGRTGHTCGV 107
Query: 121 XXXXXXXXXKVVIPLDLKGASAKPVVYHSSWICIGKRGRKPSSVSAANAQLNITVRAEPD 180
KV + +DL A ++ V +H+ W +G G KPS A+L++ V AEPD
Sbjct: 108 ASGKLLG--KVEVAVDLAAALSRTVAFHNGWKKLGGDGDKPS------ARLHLLVCAEPD 159
Query: 181 PRFVFEFDGEPECSPQVLQVQGSMKQPMFTCKFSCRSNSDLRSRSMPADMGSGGRNWLT- 239
PRFVF+F GEPECSP V Q+Q ++KQP+F+CKFS S+ + RSRS+P+ R W+T
Sbjct: 160 PRFVFQFGGEPECSPVVYQIQDNLKQPVFSCKFS--SDRNGRSRSLPSGFTYSSRGWITR 217
Query: 240 AFGSDR--ERAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSKSNPGAWLVLR 297
D+ ++ +ERKGW +T+HDLSGSPVA ASM+TPFVASPG+DRVS+SNPGAWL+LR
Sbjct: 218 TLSGDQWEKKQARERKGWMITIHDLSGSPVAAASMITPFVASPGSDRVSRSNPGAWLILR 277
Query: 298 PGD---GTWKPWGRLECWRERGAGAAAGDSLGYRFELVLPDPTGMGVGVSVAESTIPASK 354
P +WKPWGRLE WRERG A D LGY+FELV + T G+ +AE T+ +
Sbjct: 278 PHGTCVSSWKPWGRLEAWRERG----AIDGLGYKFELVRDNST--STGIPIAEGTMSTKQ 331
Query: 355 GGRFAIDLTATQQFXXXXXXXXXXXXXXDYGMWPFGS--CRGFVMSAAVQGEGKCSRPAV 412
GG+F+ID + Q G P S +GFVM ++V+GEGK S+P V
Sbjct: 332 GGKFSIDRRVSGQ-----------------GESPAISSPVKGFVMGSSVEGEGKVSKPVV 374
Query: 413 EVGVQNVGCXXXXXXXXXXXXXXXXSMDACRLFSHRLRREL 453
VG Q+V C S+DAC+LFS +LR+EL
Sbjct: 375 HVGAQHVTCMADAALFVALSAAVDLSVDACQLFSRKLRKEL 415
>AT3G19680.1 | chr3:6840448-6842107 FORWARD LENGTH=492
Length = 491
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 248/503 (49%), Gaps = 71/503 (14%)
Query: 1 MDPCPFVRVLVGNLSLKMXXXXXXXXXXXXXXXS----TSP-CYCKIRLNKLPYQTXXXX 55
MDPC FVR++VGNL+++ S T+P CYCKIR P +
Sbjct: 1 MDPCSFVRIIVGNLAVRFPSSSSSSSSSSGPSVSGINPTAPNCYCKIRFKNFPREIVSVP 60
Query: 56 XXXXXXXXXXXXXXXXXXXXXXXXXFHLSKADLDRLTAKPSLFGSRTARLKIVVYAXXXX 115
F LSKA ++ KP + L + Y+
Sbjct: 61 VMFRTESESETRCSSSGNVSTVAACFSLSKAQIEASLKKPKF-----SVLSVEAYSRGNS 115
Query: 116 --------XXXXXXXXXXXXXXKVVIPLDLKGASAKPVVYHSSWICIGKRGRKPSSVSAA 167
+ + LDLK A K + H+ W+ + + K S + +
Sbjct: 116 DGDDGVSGASCGLATAGEKLLGRFEVSLDLKSAETKSFLAHNGWVALPSK--KTKSKTGS 173
Query: 168 NAQLNITVRAEPDPRFVFEFDGEPECSPQVLQVQGSMKQPMFTCKFSCR-SNS---DLRS 223
+ +L+++VR EPDPRFVF+FDGEPECSPQV QVQG+ KQ +FTCKF R SNS +L
Sbjct: 174 DPELHVSVRVEPDPRFVFQFDGEPECSPQVFQVQGNTKQAVFTCKFGSRNSNSGDRNLLH 233
Query: 224 RSMPADMGSGGRNWLTAFGSDRERAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTD 283
S S R+ +++ S++E+ KERKGWS+TVHDLSGSPVA+ASMVTPFV SPG++
Sbjct: 234 SSSMMSEISSTRSCISSMNSEKEQPSKERKGWSITVHDLSGSPVAMASMVTPFVPSPGSN 293
Query: 284 RVSKSNPGAWLVLRPGDGTWKPWGRLECWRERGAGAAAGDSLGYRFELVLPDPTGMGVGV 343
RV++S+PGAWL+LRP TWKPWGRLE WRE G D+LGYRFEL G+ V
Sbjct: 294 RVTRSSPGAWLILRPDGCTWKPWGRLEAWREAG----YSDTLGYRFELF---QDGIATAV 346
Query: 344 SVAESTIPASKGGRFAIDLTATQQFXXXXXXXXXXXXXXDYGMWPFGS------------ 391
S A S+I GG F ID+T G W GS
Sbjct: 347 S-ASSSISLKNGGSFVIDVTGGTS------TTASTPTTSPQGSWDLGSGSSAGSRPASRP 399
Query: 392 ---------------------CRGFVMSAAVQGEGKCSRPAVEVGVQNVGCXXXXXXXXX 430
RGFVMSA V+G GK S+P VEVGV +V C
Sbjct: 400 GSGSGSDFGYLLPQHPSAAAQNRGFVMSATVEGVGKRSKPEVEVGVTHVTCTEDAAAHVA 459
Query: 431 XXXXXXXSMDACRLFSHRLRREL 453
S+DACRLFSH+LR+EL
Sbjct: 460 LAAAVDLSLDACRLFSHKLRKEL 482
>AT1G50040.1 | chr1:18542236-18543823 FORWARD LENGTH=461
Length = 460
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 178/486 (36%), Positives = 240/486 (49%), Gaps = 51/486 (10%)
Query: 1 MDPCPFVRVLVGNLSLKM------XXXXXXXXXXXXXXXSTSPCYCKIRLNKLPYQTXXX 54
MDPC FVR++VGNL+++ S+ CYCKI+ P Q
Sbjct: 1 MDPCSFVRIIVGNLAVRFPRSPSSSSSSSSSSGPSVSDVSSGNCYCKIKFKSFPRQIVSV 60
Query: 55 XXXXXXXXXXXXXXXXXXXXXXXXXXFHLSKADLDRLTAKPSLFGSRTARLKIVVYAXXX 114
F LSK+ ++ SL ++ + L + VY+
Sbjct: 61 PVLLRTESESESRCCSGNVSTVAAC-FSLSKSQIE-----TSLKKAKWSVLSVEVYSRRS 114
Query: 115 XXXXXXXXXXXXXXXKVVIPLDLKGASAKPVVYHSSWICIGKRGRKPSSVSAANAQLNIT 174
+ + LDLK A +K + H+ W+ +G + K + S ++ +L+++
Sbjct: 115 ASCGFVAASGEKLIGRFQVTLDLKAAESKTCLAHNGWVDLGTKS-KNNKKSGSDPELHVS 173
Query: 175 VRAEPDPRFVFEFDGEPECSPQVLQVQGSMKQPMFTCKFSCRSNSDLRSRSMPADMGSGG 234
VR EPD RFVF+FDGEPECSPQV QVQG+ KQ +FTCKF R++ D + + SG
Sbjct: 174 VRVEPDTRFVFQFDGEPECSPQVFQVQGNAKQAVFTCKFGFRNSGDRNLSLSLSSVTSG- 232
Query: 235 RNWLTAFGSDRERAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSKSNPGAWL 294
+E+ KERKGWS+T+HDLSGSPVA+ASMVTPFV SPG++RVS+S+PGAWL
Sbjct: 233 ----------KEQFSKERKGWSITIHDLSGSPVAMASMVTPFVPSPGSNRVSRSSPGAWL 282
Query: 295 VLRPGDGTWKPWGRLECWRERGAGAAAGDSLGYRFELVLPDPTGMGVGVSVAESTIPASK 354
+LRP TWKPW RL+ WRE G D LGYRFEL S + +
Sbjct: 283 ILRPDGYTWKPWVRLQAWREPG----VSDVLGYRFELYKDGIAVAVSASSSISTKL---- 334
Query: 355 GGRFAID----------LTATQQFXXXXXXXXXXXXXXDYGM---WPFGSCR-----GFV 396
GG F ID ++++ D G + F + GFV
Sbjct: 335 GGSFIIDGSTSTTTTASWSSSEGSFDLSSWSSIRSSRTDSGSGSDFRFSLSQAQQNLGFV 394
Query: 397 MSAAVQGEGKCSRPAVEVGVQNVGCXXXXXXXXXXXXXXXXSMDACRLFSHRLRREL-SA 455
MS VQG K S+P VEVGV++V C SMDACRLFS +LR EL
Sbjct: 395 MSTRVQGVEKQSKPKVEVGVKHVTCTEDAAAHVALAAAVDLSMDACRLFSQKLRNELRQP 454
Query: 456 SRSDLL 461
SR D++
Sbjct: 455 SRVDIV 460
>AT5G17640.1 | chr5:5811047-5812429 REVERSE LENGTH=433
Length = 432
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 220/450 (48%), Gaps = 40/450 (8%)
Query: 1 MDPCPFVRVLVGNLSLKMXXXXXXXXXXXXXXXS-TSPCYCKIRLNKLPYQTXXXXXXXX 59
MDP F+R+ VG+L+L++ + +S C C+I+L P QT
Sbjct: 1 MDPQAFIRLSVGSLALRIPKVLINSTSKSNEKKNFSSQCSCEIKLRGFPVQTTSIPLMPS 60
Query: 60 XXXXXXXXXXXXXXXXXXXXXFHLSKADLDRLTAKPSLFGSRTARLKIVVYAXXXXXXXX 119
F+L ++DL R P F S A L+I V+
Sbjct: 61 LDAAPDHHSISTS--------FYLEESDL-RALLTPGCFYSPHAHLEISVFTGKKSLNCG 111
Query: 120 XXXXXXXXXXKVVIPLDLKGASAKPVVYHSSWICIGKRGRKPSSVSAANAQLNITVRAEP 179
+ + + KP++ + WI IGK R A+L++ V+ +P
Sbjct: 112 VGGKRQQIGM-FKLEVGPEWGEGKPMILFNGWISIGKTKRD------GAAELHLKVKLDP 164
Query: 180 DPRFVFEFDGEPECSPQVLQVQGSMKQPMFTCKFSCRSNSDLRSRSMPADMGSGGRNWLT 239
DPR+VF+F+ SPQ++Q++GS+KQP+F+CKFS R R D +G W +
Sbjct: 165 DPRYVFQFEDVTTLSPQIVQLRGSVKQPIFSCKFS-------RDRVSQVDPLNG--YWSS 215
Query: 240 A-FGSDRERAGKERKGWSVTVHDLSGSPVALASMVTPFVASPGTDRVSKSNPGAWLVLRP 298
+ G++ E +ERKGW V +HDLSGS VA A + TPFV S G D V+KSNPGAWLV+RP
Sbjct: 216 SGDGTELESERRERKGWKVKIHDLSGSAVAAAFITTPFVPSTGCDWVAKSNPGAWLVVRP 275
Query: 299 G---DGTWKPWGRLECWRERGAGAAAGDSLGYRFELVLPDPTGMGVG-VSVAESTIPASK 354
+W+PWG+LE WRERG DS+ RF L+ G+ VG V ++E I A K
Sbjct: 276 DPSRPNSWQPWGKLEAWRERG----IRDSVCCRFHLL---SNGLEVGDVLMSEILISAEK 328
Query: 355 GGRFAIDLTATQQFXXXXXXXXXXXXXXDY-GMWPFGSCRGFVMSAAVQGEGKCSRPAVE 413
GG F ID T Q D+ G+ S GFVMS+ VQGEGK S+P V+
Sbjct: 329 GGEFLID-TDKQMLTVAATPIPSPQSSGDFSGLGQCVSGGGFVMSSRVQGEGKSSKPVVQ 387
Query: 414 VGVQNVGCXXXXXXXXXXXXXXXXSMDACR 443
+ +++V C S+ AC+
Sbjct: 388 LAMRHVTCVEDAAIFMALAAAVDLSILACK 417
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,116,699
Number of extensions: 304583
Number of successful extensions: 570
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 543
Number of HSP's successfully gapped: 8
Length of query: 462
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 360
Effective length of database: 8,310,137
Effective search space: 2991649320
Effective search space used: 2991649320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)