BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0115700 Os07g0115700|Os07g0115700
(1925 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747 112 2e-24
AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576 63 1e-09
AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804 62 4e-09
AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799 61 5e-09
AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867 60 8e-09
AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878 57 1e-07
AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752 57 1e-07
AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344 57 1e-07
>AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747
Length = 746
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 155/383 (40%), Gaps = 78/383 (20%)
Query: 809 KVDIAKAF----DTFPCTYLGIPLSVRKLPKAALQPLVDKVSHRLPPWKGRLTTLAGRSV 864
K DI +F P YLG+PL +K+ + PLV+K+ R+ W R + AGR
Sbjct: 9 KADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQ 68
Query: 865 LVQSVLSSIPVHVSIAIGLPSWVIKAIDKKRRAFLWTGTDSANGGQCRVSWMRVCRPRDL 924
L+ SV+ S+ A LPS IK ID +FLW+G + N + +V+W VC P+D
Sbjct: 69 LISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPE-LNTKKAKVAWSDVCTPKDE 127
Query: 925 GGLGIPDLR---------VAGFALRVRWLWLQRSGHPYWSDLKAPVERSVSDMFAASTFS 975
GGLGI L+ ++G W+W + H R+++ F
Sbjct: 128 GGLGIRSLKEANKGSFWSISGNTTLGSWMWKKILKH-----------RALASGFVKHD-- 174
Query: 976 ILGDGQSTLFWTDRWID-GRSI----------------ASIAPDLLHVVPPRFRGSRTVA 1018
+ +G +T FW D W GR I AS+A +++ P R R
Sbjct: 175 -IHNGSNTSFWFDNWSKIGRLIDVTGHRGCIDMGITLHASVAEAVVNHRPRRHRH----- 228
Query: 1019 AGLANNSWVGDIRGALTVPVISQFLLVWDAVVPTQ---LSPGIEDHLVWRWTGD---QCY 1072
L + D + + L+ G ED + W+ GD C+
Sbjct: 229 ---------------------DTLLRIEDVIAEVRHQGLTSG-EDTVRWKGNGDIFKPCF 266
Query: 1073 SARSEYQAFFLGQHSFAYADLLWHAKGPAKCKFFLWFAFQQRCWTADLLQKRGIDSHSAC 1132
+ + + A + + +W + K W A + R T D + + S+C
Sbjct: 267 NTKETWAATREPKLKVNWYKGVWFSHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSC 326
Query: 1133 PFCAQELETANHILIDCVFARQV 1155
C +ET +H+ C ++ +V
Sbjct: 327 VLCHHLVETRDHLFFTCPYSAEV 349
>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
Length = 575
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 126/328 (38%), Gaps = 53/328 (16%)
Query: 872 SIPVHVSIAIGLPSWVIKAIDKKRRAFLWTGTDSANGGQCRVSWMRVCRPRDLGGLGIPD 931
++P + LP V K I F W A G + +W + + GG+G D
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWK-AWDHLSCYKAEGGIGFKD 60
Query: 932 LRVAGFALRVRWLW------------LQRSGHPYWSD-LKAP-------VERSV---SDM 968
+ AL + +W + +S + + SD L AP V +S+ ++
Sbjct: 61 IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEI 120
Query: 969 FAASTFSILGDGQSTLFWTDRWIDGRSIASIAPDLLHVVPPRFRGSRTV--AAGLANNS- 1025
+++G+G+ + W +W+D + AS A + V P + ++ + L + S
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKP-ASAALRMQRVPPQEYASVSSILKVSDLIDESG 179
Query: 1026 --WVGDIRGALTVPVISQFLLVWDAVVPTQLSPG---IEDHLVWRWTGDQCYSARSEYQA 1080
W D+ L P + + L+ +L PG I D W +T Y+ +S Y
Sbjct: 180 REWRKDVIEML-FPEVERKLI-------GELRPGGRRILDSYTWDYTSSGDYTVKSGYWV 231
Query: 1081 F--FLGQHSFAYA----------DLLWHAKGPAKCKFFLWFAFQQRCWTADLLQKRGIDS 1128
+ + S +W ++ K + FLW A L R +
Sbjct: 232 LTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSK 291
Query: 1129 HSACPFCAQELETANHILIDCVFARQVW 1156
SAC C ET NH+L C FAR W
Sbjct: 292 ESACIRCPSCKETVNHLLFKCTFARLTW 319
>AT5G45540.1 | chr5:18458294-18460705 REVERSE LENGTH=804
Length = 803
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 96/237 (40%), Gaps = 59/237 (24%)
Query: 1648 AAAGHGNLTNGVSSLKSNGAHHLLWACDPDPAARILQNQTP-----SILIWHIATCCCEK 1702
+A G+ L S K +G H ++LQ T SIL+WHIAT +
Sbjct: 559 SARGNWTLLETSSKKKEDGTDH----------TKLLQYVTEKDYDQSILLWHIATELLYQ 608
Query: 1703 KPPNYQ-----------HEEELKNFQVATALSRYCAYHSFFLGTTMT------------- 1738
KP + + +EE N + + LS Y Y T M+
Sbjct: 609 KPIDKKVTEKEEHSTNREKEEHSNREFSKILSDYMMYLLIVQPTLMSAVSGIAKIRFRDT 668
Query: 1739 ---------------QRFLRERGKKE-FDAMALQGYEPPP---EGEPTKGIFESGLKLGK 1779
R++++ KE A+ E P +G+ +K + L K
Sbjct: 669 CEEAKDFFQRRHVDKSRYVKKNLMKEACRAILSVNTEIDPMAVKGDRSKSVLFDASVLAK 728
Query: 1780 QLEEMPEKMRWKVLADFWPEMLLYISPSDNVKEHIQRLAKGGEFITHLWALLSHAGI 1836
+L E M W+V++ W E+L Y S + +EH +L+KGGE I +W L++H G+
Sbjct: 729 ELMNEGENM-WEVVSKVWVELLCYASLHCDSQEHASQLSKGGELINFVWLLMAHFGL 784
>AT5G45530.1 | chr5:18454316-18457222 REVERSE LENGTH=799
Length = 798
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 1689 SILIWHIATCCCEKKPPNYQHE----EELKNFQVATALSRYCAYHSFFLGTTMTQ----- 1739
S+L+WHIAT C +K + E E + + + +S Y Y M++
Sbjct: 596 SLLLWHIATELCFQKEEGGKMEKLSREGYDDREFSKIISDYMMYLLIMRPKLMSEVAGIG 655
Query: 1740 ------------RFLRERGKKEFDAMA-------LQGYEPPP---EGEPTKGIFESGLKL 1777
RF + R K+ M L + P +G+ +K + L
Sbjct: 656 TIRFRDTKAEAERFFKGRQIKDLRDMKRASETVLLVSNDIEPILVKGDRSKSVLFDASML 715
Query: 1778 GKQLEEMPEKM----RWKVLADFWPEMLLYISPSDNVKEHIQRLAKGGEFITHLWALLSH 1833
K+L+ + E +W+VL+ W E+L Y + EH+ +L++GGE + +W L++H
Sbjct: 716 AKELQNLKESSNEDGKWRVLSKVWVELLCYAASHCKATEHVAQLSRGGELLNFVWLLMAH 775
Query: 1834 AGI 1836
G+
Sbjct: 776 FGL 778
>AT5G45470.1 | chr5:18422164-18424764 REVERSE LENGTH=867
Length = 866
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 1689 SILIWHIATCCC------EKKPPNY-QHEEELKNFQVATALSRYCAYHSFFLGTTM---- 1737
S+L+WHIAT C E P Y + + N + + +S Y Y M
Sbjct: 663 SLLMWHIATELCYQQHEKETIPEGYDEQRKHYSNREFSKIISDYMMYLLILQPGLMSEVA 722
Query: 1738 -------------TQRFLRER---GKKEFDAMALQGYEPPPEGEP-------TKGIFESG 1774
T +F + R + + L + E EP +K +
Sbjct: 723 GIGKIRFRDTLAETHKFFQRRHIENDRSVETATLNILDVESEIEPMGVKGDRSKSVLFDA 782
Query: 1775 LKLGKQLEEMPE---KMRWKVLADFWPEMLLYISPSDNVKEHIQRLAKGGEFITHLWALL 1831
+L K L EM + K +W++L+ W E+L Y + + H+++L++GGE I +W L+
Sbjct: 783 SRLAKDLAEMEKTHNKDKWEILSKVWVELLCYAACHCDSTAHVEQLSRGGELINFVWLLM 842
Query: 1832 SHAGILER 1839
+H G+ ++
Sbjct: 843 AHFGLTDQ 850
>AT5G45480.1 | chr5:18426296-18428929 REVERSE LENGTH=878
Length = 877
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 1689 SILIWHIATCCCEKKPPNYQHEEELKNFQVATALSRYCAYHSFFLGTTMT---------- 1738
S+L+WHIAT + + + F + LS Y Y T M+
Sbjct: 674 SLLVWHIATELLYQTKKGTKANHSAREF--SKILSDYMMYLLMMQPTLMSAVVGIGKIRF 731
Query: 1739 -------QRFLRER------GKKEFDA----MALQGYEPPPEGEP-------TKGIFESG 1774
QRF R KK DA +A+ P + EP +K + G
Sbjct: 732 RDTCEEAQRFFDRRHIMGISAKKAPDAKEASVAILSVAVPAKAEPIDVKGDRSKSVLFDG 791
Query: 1775 LKLGKQLEEMPEKMR-----WKVLADFWPEMLLYISPSDNVKEHIQRLAKGGEFITHLWA 1829
L K+L+ + + WK+++ W E+L Y + EH +L+KGGE I+ +W
Sbjct: 792 AMLAKELKGLRKNKEDDSEMWKIMSQVWVELLSYAATKCGAIEHAAQLSKGGELISFVWL 851
Query: 1830 LLSHAGI 1836
L++H G+
Sbjct: 852 LMAHFGL 858
>AT4G19090.1 | chr4:10449900-10452757 FORWARD LENGTH=752
Length = 751
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 37/184 (20%)
Query: 1689 SILIWHIATCCCEKKP----PNYQHEEELKNFQVATALSRYCAYHSFFLGTTMTQ----- 1739
S+LIWHIAT C ++ N E N +++ +S Y Y M++
Sbjct: 567 SLLIWHIATELCYQEEDSAKENCDKSEYHTNRKISKIISDYMMYLLIMQPKLMSEVAGIG 626
Query: 1740 ------------RFLRERG-----------KKEFDAMALQGYEP-PPEGEPTKGIFESGL 1775
RF ++ G KE + A EP +G +K +
Sbjct: 627 KIRFRDTLAEADRFFKKMGIIRDSRNVKLASKEILS-ADTSIEPREVKGNHSKSVLFEAS 685
Query: 1776 KLGKQLEEMPEKM---RWKVLADFWPEMLLYISPSDNVKEHIQRLAKGGEFITHLWALLS 1832
L K+L+ + + +WK+L+ W E L + + + ++ L+KGGEFI +W L++
Sbjct: 686 SLAKELQRVEKNFGEDKWKILSKVWLEFLFHAASHCDATTRMELLSKGGEFINFVWLLMA 745
Query: 1833 HAGI 1836
H G+
Sbjct: 746 HFGL 749
>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
Length = 343
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 1094 LWHAKGPAKCKFFLWFAFQQRCWTADLLQKRGIDSHSACPFCAQELETANHILIDCVFAR 1153
+W K K K FLW T D L++R I +H C C QE ET+ H+ DC +A+
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 1154 QVW 1156
QVW
Sbjct: 78 QVW 80
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 34,451,941
Number of extensions: 1361115
Number of successful extensions: 2974
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 2967
Number of HSP's successfully gapped: 11
Length of query: 1925
Length of database: 11,106,569
Length adjustment: 113
Effective length of query: 1812
Effective length of database: 8,008,561
Effective search space: 14511512532
Effective search space used: 14511512532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 119 (50.4 bits)