BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0113000 Os07g0113000|Os07g0113000
(1790 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G28780.1 | chr5:10812907-10814173 REVERSE LENGTH=338 179 1e-44
AT3G51700.1 | chr3:19179443-19181145 REVERSE LENGTH=345 155 2e-37
AT3G51690.1 | chr3:19176731-19178107 REVERSE LENGTH=332 150 5e-36
AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605 91 5e-18
AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630 82 2e-15
AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641 65 3e-10
AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385 60 1e-08
AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785 59 3e-08
AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533 57 9e-08
AT3G30730.1 | chr3:12357396-12357599 REVERSE LENGTH=68 53 1e-06
AT5G45400.1 | chr5:18398990-18401644 FORWARD LENGTH=854 52 3e-06
>AT5G28780.1 | chr5:10812907-10814173 REVERSE LENGTH=338
Length = 337
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 2/190 (1%)
Query: 1023 GDEKEYLSCDTISKCSEQIPDFDLLYPTELLNSIDTNNFPTHRLVLKEGVTVMLLQNLNQ 1082
GD KEYLS +I K D++ LY + LNS++ + P H++ LK+GV +M ++N NQ
Sbjct: 141 GDSKEYLSSYSIGKADTIGADYEALYHVKYLNSLEFPSLPKHKISLKKGVPIMQMRNFNQ 200
Query: 1083 SMCLCNGTRLLVVGLGQRILHCVILTGSNIGETVCIPKISLSTAKLKWPFTLQRRQFPIR 1142
LCNGTRL+V LG++++ I+TG++ G+ V IP+ LS + + PFTL+R+QFP+R
Sbjct: 201 KEGLCNGTRLIVTNLGEQVIEAQIVTGTHAGKMVSIPRFILSPPQSEHPFTLRRQQFPMR 260
Query: 1143 VCYSMTINKSQGQTLQRVGVYLKKPVFTHGQLYVAFSRATSRSGLRILIENDDGSCGSET 1202
VCY+MTI K+QGQ+L+ +YL PVF+H QLYVA SR TS GL IL +D + E
Sbjct: 261 VCYAMTIIKNQGQSLKSDVLYLPNPVFSHVQLYVALSRVTSPIGLTILHGDDQKN--DEV 318
Query: 1203 KNVVYHEILD 1212
KN+VY E +
Sbjct: 319 KNIVYKEFYN 328
>AT3G51700.1 | chr3:19179443-19181145 REVERSE LENGTH=345
Length = 344
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 2/194 (1%)
Query: 1023 GDEKEYLSCDTISKCSEQIPDFDLLYPTELLNSIDTNNFPTHRLVLKEGVTVMLLQNLNQ 1082
G+E + DTI P+ +LYP E LNSI FP +L LK G VMLL++L
Sbjct: 144 GEETKCYGADTIYPTHAS-PNDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAP 202
Query: 1083 SMCLCNGTRLLVVGLGQRILHCVILTGSNIGETVCIPKISLSTAKLKWPFTLQRRQFPIR 1142
L GTRL + + +L +I+TG+N GE V IP+I + K+P ++RRQFP++
Sbjct: 203 YGWLRKGTRLQITRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVK 262
Query: 1143 VCYSMTINKSQGQTLQRVGVYLKKPVFTHGQLYVAFSRATSRSGLRILIENDDGSCG-SE 1201
+ ++MTI++SQ QTL +VG+YL + + HGQ YVA S+ SR+GL++LI + DG E
Sbjct: 263 LAFAMTIDESQRQTLSKVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEE 322
Query: 1202 TKNVVYHEILDATL 1215
TKNVV+ E+ L
Sbjct: 323 TKNVVFKELFTEHL 336
>AT3G51690.1 | chr3:19176731-19178107 REVERSE LENGTH=332
Length = 331
Score = 150 bits (380), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 121/190 (63%), Gaps = 5/190 (2%)
Query: 1023 GDEKEYLSCDTISKCSEQIPDFDLLYPTELLNSIDTNNFPTHRLVLKEGVTVMLLQNLNQ 1082
G+EKE LS D+IS P+ D+ P E+LNSI P +L LK G VMLL++L+
Sbjct: 143 GEEKECLSTDSISPS----PNDDMFVPLEVLNSIKVPGLPDFKLRLKVGAPVMLLRDLDP 198
Query: 1083 SMCLCNGTRLLVVGLGQRILHCVILTGSNIGETVCIPKISLSTAKLKWPFTLQRRQFPIR 1142
S GTRL + L +L +I+ G+ G+ + IP+I+ + +P ++R Q+P++
Sbjct: 199 SRGFFTGTRLQITRLCGFLLEAMIIAGNKHGKKIWIPRIASYPTETNFPLQMRRTQYPLK 258
Query: 1143 VCYSMTINKSQGQTLQRVGVYLKKPVFTHG-QLYVAFSRATSRSGLRILIENDDGSCGSE 1201
+ ++MTI++SQ TL +VG+YL + VF+HG Q++VA S+ SR+GL++LI + DG+ E
Sbjct: 259 LAFAMTIDESQVHTLSKVGLYLPRQVFSHGRQMFVAISKVKSRAGLKVLITDKDGNPQEE 318
Query: 1202 TKNVVYHEIL 1211
KNVV+ E+
Sbjct: 319 AKNVVFKELF 328
>AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605
Length = 604
Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 21/335 (6%)
Query: 1260 DLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFT 1319
++ L DE+G I A +F + F GKVYY+ +K +NK ++ V N MT
Sbjct: 196 NVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLN 255
Query: 1320 KWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGFITEISTPTM-LRPKSR 1378
+ + VE+ + P + P++E+ +V++ + +DVIG + +S PTM +R K+
Sbjct: 256 ENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKD-LIDVIGVVQSVS-PTMSIRRKND 313
Query: 1379 DASSLKRIIQICDANNSTLNVSLWAEQALAFDAESIHKAGQRLALSRGSACKWIGANFQP 1438
+ KR I + D T+ VSLW + A E + A ++ S +GA FQ
Sbjct: 314 NEMIPKRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLK--VGA-FQG 370
Query: 1439 IKLLQAPTTNIA-DENADDKT-VRELLDMNPHKN---------RAPATNIADENADDKTV 1487
+ L +N+ + N+ + T ++ D + + A N + D+
Sbjct: 371 VSLSTISRSNVVINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVF 430
Query: 1488 RELLDMNPH--KNRRTRFQANVTIRKICNDSSWWYNSCEKC-LRVVKPFGYTYKCTGCYN 1544
+ NP + + F I I D + WY +C+ C +V + Y C C
Sbjct: 431 LSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQK 490
Query: 1545 IAMAVP-RYKLSVLAGDDTADAVFILFGKIAQRIV 1578
RY ++V D T + F A++I+
Sbjct: 491 KDQECSLRYIMAVKVSDSTGETWLSAFNDEAEKII 525
>AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630
Length = 629
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 19/334 (5%)
Query: 1260 DLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFT 1319
++ L DE+G I A +F + F GKVYY+ +K +NK ++ V N MT
Sbjct: 220 NVELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLN 279
Query: 1320 KWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGFITEISTPTMLRPKSRD 1379
+ + VE+ P + P+ E+ +V++ E +D+IG + +S +R ++ +
Sbjct: 280 ENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKE-LIDLIGVVQSVSPTMSIRRRTDN 338
Query: 1380 ASSLKRIIQICDANNSTLNVSLWAEQALAFDAESIHKAGQRLALSRGSACKWIGANFQPI 1439
KR I + D + T+ VSLW + A E + A Q ++ S +G +FQ +
Sbjct: 339 EMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLK--VG-DFQGV 395
Query: 1440 KLLQAPTTN--IADENADDKTVRELLDMNPHKNRA---------PATNIADENADDKTVR 1488
L +N I E+ + K ++ D + A N + D+ +
Sbjct: 396 SLSTISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLL 455
Query: 1489 ELLDMNPH--KNRRTRFQANVTIRKICNDSSWWYNSCEKC-LRVVKPFGYTYKCTGCYNI 1545
+ NP + + F I I D + WY +C+ C +V + Y C GC
Sbjct: 456 SHITSNPSLFEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRK 515
Query: 1546 AMAVP-RYKLSVLAGDDTADAVFILFGKIAQRIV 1578
RY ++V D + + F A++I+
Sbjct: 516 YEECSLRYIMAVKVTDSSGETWISSFNDEAEKIL 549
>AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641
Length = 640
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 1247 FTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTSNKS 1306
+ + K K++ DL+ D GG I F L+ F + GKVY + +K + K+
Sbjct: 225 YNNAKGDGKVFSFDLL--DYDGGEIRVTCFNALVDRFYDVTEVGKVYLISKGSLKPAQKN 282
Query: 1307 YRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGFITE 1366
+ + N + ++VE C D + P ++ P++++ N +N + +DVIG +T
Sbjct: 283 FNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENA--ENNTILDVIGVVTS 340
Query: 1367 ISTPTMLRPKSRDASSLKRIIQICDANNSTLNVSLWAE 1404
++ P++ + + +RI+ + D + + V+LW E
Sbjct: 341 VN-PSVPILRKNGMETHRRILNLKDESGKAVEVTLWGE 377
>AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385
Length = 384
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 1223 TSIDKLFEGDDNSRLLARVSRLWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQV 1282
+ D L G +++ R+ R W+ + K + I L+L+DEK IHA I L
Sbjct: 16 VAFDALRLGRSTQQVVGRLLRFWDARNIKKDGQFMGIVLLLLDEKCSVIHAFIPAALASH 75
Query: 1283 FKPLLTEGKVYYLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLT 1342
F+ +L EG ++ + + V K Y+ +P ++ F T++ + DV PT+
Sbjct: 76 FRQVLREGIIFNVSGFEVGRCTKLYKITDHPFLLRFLPATTIIEVSDVG---PTIEREKF 132
Query: 1343 PLNEVSNFVDKNESFVDVIGFITEISTPTMLRPKSRDASSLKRIIQICDANNSTL-NVSL 1401
L N + +++ G IT + + D +S +R++ ++S + +SL
Sbjct: 133 MLRNFDNLQALANTNIELPGQITFVQGSNL-----NDPTSTQRLVLRYRIDSSVIVYLSL 187
Query: 1402 WAEQALAFDAE 1412
W + A F A
Sbjct: 188 WDDVAATFRAH 198
>AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785
Length = 784
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 1237 LLARVSR---LWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVY 1293
+ ARV+ L ++++ + K+++ DL+ D GG I F + F + G +Y
Sbjct: 243 IKARVTNKAALKQYSNPRGEGKVFNFDLL--DADGGEIRVTCFNAVADQFYDQIVVGNLY 300
Query: 1294 YLDSYRVKTSNKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDK 1353
+ ++ + K++ + N + ++++QC + P + + ++ + +
Sbjct: 301 LISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESM--E 358
Query: 1354 NESFVDVIGFITEISTPTMLRPKSRDASSLKRIIQICDANNSTLNVSLWAE 1404
N VDVIG ++ IS PT+ + ++ KR +Q+ D + ++ V++W +
Sbjct: 359 NNCIVDVIGIVSSIS-PTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGD 408
>AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533
Length = 532
Score = 57.0 bits (136), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%)
Query: 1236 RLLARVSRLWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYL 1295
++ R++RLW + I IDL+LVD+KG I A I LL F+ L EG Y +
Sbjct: 19 KVKVRIARLWAYHKKDRPKDIMGIDLLLVDDKGERIQASIRSQLLSKFQEKLEEGDCYMI 78
Query: 1296 DSYRVKTSNKSYRPVANPLMMTFTKWTSV 1324
++ + + SYR ++P + F T +
Sbjct: 79 MNFEISDNGGSYRASSHPYKINFMSMTHI 107
>AT3G30730.1 | chr3:12357396-12357599 REVERSE LENGTH=68
Length = 67
Score = 53.1 bits (126), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 428 IDGFISA-EIPDFETDELCYELAHIN-VEWCNKSNMIKYLFKYVMKGHDRSKIYFETTAQ 485
++GFISA I ++ D + +N VEWCN SN IKYLFKYV KG ++S I+ E
Sbjct: 1 MEGFISANRIFPYQEDLKYNSIYKLNKVEWCNSSNAIKYLFKYVTKGVNKSAIFIEKGTN 60
Query: 486 T 486
T
Sbjct: 61 T 61
>AT5G45400.1 | chr5:18398990-18401644 FORWARD LENGTH=854
Length = 853
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 1244 LWEFTDCKDATKIYHIDLVLVDEKGGSIHAQIFPPLLQVFKPLLTEGKVYYLDSYRVKTS 1303
L F + + K++ DL+ D GG I F + F + G VY + +K +
Sbjct: 324 LRRFNNPRGEGKLFSFDLL--DADGGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPA 381
Query: 1304 NKSYRPVANPLMMTFTKWTSVEQCLDVPFNFPTVVYTLTPLNEVSNFVDKNESFVDVIGF 1363
K++ + N + ++++ C D P + + ++ N +N S DVIG
Sbjct: 382 QKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFRNIGDIENM--ENNSTTDVIGI 438
Query: 1364 ITEISTPTMLRPKSRDASSLKRIIQICDANNSTLNVSLWA 1403
++ IS PT+ + KR +Q+ D + ++ V++W
Sbjct: 439 VSSIS-PTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWG 477
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 37,935,792
Number of extensions: 1606775
Number of successful extensions: 3911
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 3904
Number of HSP's successfully gapped: 11
Length of query: 1790
Length of database: 11,106,569
Length adjustment: 113
Effective length of query: 1677
Effective length of database: 8,008,561
Effective search space: 13430356797
Effective search space used: 13430356797
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 119 (50.4 bits)