BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0106900 Os07g0106900|AK108101
(204 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 80 6e-16
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 74 6e-14
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 74 6e-14
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 71 3e-13
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 71 3e-13
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 68 4e-12
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 66 1e-11
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 65 3e-11
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 65 3e-11
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 59 2e-09
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 59 2e-09
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 57 8e-09
AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272 56 1e-08
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 54 8e-08
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGRA 87
L Y HD+ G TAV+V P FG SK VGRA
Sbjct: 42 LHFYFHDVISGDKPTAVKVAEA----RPTTTLNVKFGVIMIADDPLTEGPDPSSKEVGRA 97
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y ++ VF + V T G + GSTI + GR+DI +VREL ++GGTG R A
Sbjct: 98 QGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPIIGGTGAFRFAR 157
Query: 148 GHVLWTTARRESPVHMVLELDVYAW 172
G+ L T + + V+E +V+ W
Sbjct: 158 GYALPKTYKIVG-LDAVVEYNVFIW 181
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKPVGRAQ 88
L+ Y HD G TAV+V GT G+ F SK VGRAQ
Sbjct: 44 NLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVF--MVDDALTETADPKSKLVGRAQ 101
Query: 89 GSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRATG 148
G Y +C +++++ DGPYK STI + G++ +RE+ +VGGTG R A G
Sbjct: 102 GLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMFRMARG 161
Query: 149 HVLWTT 154
+ + T
Sbjct: 162 YAIART 167
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGRA 87
L Y HD+ G TAV+V +FG SK VGRA
Sbjct: 45 LHFYFHDVISGDKPTAVKVAEA----RRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRA 100
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y L ++ F + L T G + GST+ + GR++I +VRE+ ++GGTG R A
Sbjct: 101 QGMYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFAR 160
Query: 148 GHVLWTTARRESPVHMVLELDVYAW 172
G+ T + + V+E +V+ W
Sbjct: 161 GYAQAKTYKVVG-LDAVVEYNVFIW 184
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKPVGRAQ 88
L Y HDI G T+VQV NG P + G S+ VGRAQ
Sbjct: 46 HLHFYFHDIVSGDKPTSVQVANG--PTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQ 103
Query: 89 GSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRATG 148
G Y A +++ LV T G + ST+ + GR+ + +VRE+ ++GGTG R G
Sbjct: 104 GMYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRG 163
Query: 149 HVLWTT-ARRESPVHMVLELDVYAW 172
+ L T + V+E +VY W
Sbjct: 164 YALAKTLVFNITSGDAVVEYNVYIW 188
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGRA 87
L Y HDI G T ++V G A + FG SK VGRA
Sbjct: 53 LHFYFHDIISGDKPTTIRVAEAPGTNSSA----TVFGAVLIVDAPVTEGPELSSKEVGRA 108
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y ++ F + V T+G + GST + GR+ I E REL ++GGTG R A
Sbjct: 109 QGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFAR 168
Query: 148 GHVLWTTARRESPVHMVLELDVYAW 172
G+ L T + + + V+E +V+ W
Sbjct: 169 GYALPKTYKVVN-IDAVVEYNVFIW 192
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXX--XXSKPVGRA 87
++Y HDI GP T++ + P + S+FG S +G+A
Sbjct: 47 FKVYWHDILSGPNPTSIMI-------QPPVTNSSYFGAISMIDNALTAKVPMNSTVLGQA 99
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y A + F++++ G Y GSTI I GR+ EVRE+ +VGG+G R A
Sbjct: 100 QGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFAR 159
Query: 148 GHV 150
G+V
Sbjct: 160 GYV 162
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX-------XXXSK 82
R+Y HDI G ++V ++N PP + G SK
Sbjct: 42 FRVYWHDIVTGQDSSSVSIMN---------PPKKYTGATGFGLMRMIDNPLTLTPKLSSK 92
Query: 83 PVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGK 142
VGRAQG Y ++++ + DG Y GSTI + GR+ + ++VRE+ V+GG+G
Sbjct: 93 MVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGL 152
Query: 143 LRRATGHVLWTT 154
R A G+V +T
Sbjct: 153 FRFARGYVQAST 164
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 8/134 (5%)
Query: 29 RLRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXX--XXXSKPVGR 86
R+R Y+HD G TAV++ + A P G FG SK +G
Sbjct: 40 RVRFYLHDTLSGQNPTAVRIAHANLTGGSASPVG--FGSLFVIDDPLTVGPEKHSKEIGN 97
Query: 87 AQGSYTLACLRAPVFVVSI--TLVLTDGPYKGSTILIAGRDDISEEV--RELAVVGGTGK 142
QG Y C F + + L T G + GS+I I R+ ++EEV RE+A+VGG GK
Sbjct: 98 GQGMYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRGK 157
Query: 143 LRRATGHVLWTTAR 156
R A G V T +
Sbjct: 158 FRMARGFVKVKTNK 171
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXXXXXXXX--XSKPVGRA 87
LR+Y HDI G +++++ GP+ S+FG S VG+A
Sbjct: 48 LRVYWHDIVTGRNPSSIRI---QGPV-AKYSSSSYFGSITMIDNALTLDVPINSTVVGQA 103
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y A + ++++ L G Y GSTI I GR+ + +VRE+ VVGG+G R A
Sbjct: 104 QGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFAR 163
Query: 148 GHV 150
G+V
Sbjct: 164 GYV 166
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 81 SKPVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGT 140
S VG++QG Y A R F++++ G Y GSTI I GR+ + +VRE+ VVGG+
Sbjct: 31 STVVGQSQGFYAGAAQRELGFLMAMNFAFKTGKYNGSTITILGRNTVFSKVREMTVVGGS 90
Query: 141 GKLRRATGHV 150
G R A G+V
Sbjct: 91 GIFRLARGYV 100
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Query: 30 LRLYMHDITGGPGQTAVQVVNGTGPLHPAMPPGSHFGXXXXXXX--XXXXXXXSKPVGRA 87
R+Y HDI G ++V V+N P + S FG S VG+A
Sbjct: 46 FRVYWHDILSGSNPSSV-VIN------PPISNSSFFGSVTVIDNRLTTEVAVNSTLVGQA 98
Query: 88 QGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKLRRAT 147
QG Y R ++ + G Y GS+I I GR+ + +VRE+ V+GG+G R A
Sbjct: 99 QGIYAATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFAR 158
Query: 148 GHV 150
G+V
Sbjct: 159 GYV 161
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 84 VGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKL 143
VG+AQG Y A F++ + T G Y GSTI I GR+ + +VRE+ VVGG+G
Sbjct: 94 VGQAQGMYVAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIF 153
Query: 144 RRATGHV 150
R A G+V
Sbjct: 154 RFARGYV 160
>AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272
Length = 271
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 81 SKPVGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGT 140
S+ VGRAQG + A +++ V T G + GST+ + GR+ I +VRE+ ++GGT
Sbjct: 178 SEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGRNPIFSKVREMPIIGGT 237
Query: 141 GKLRRATGHVLWTTARRESPV-HMVLELDVYAW 172
G R G+ T + + V++ +VY W
Sbjct: 238 GAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYIW 270
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 29 RLRLYMHDITGGPGQTAVQVVN-----GTGPLHPAMPPGSHFGXXXXXXXXXXXXXXSKP 83
L + HD P +A+ + G P+ P GS F S+
Sbjct: 38 NLHFFFHDTLTAPNPSAILIAKPTHTRGDNDSSPS-PFGSLFALDDPLTVGPDPK--SEK 94
Query: 84 VGRAQGSYTLACLRAPVFVVSITLVLTDGPYKGSTILIAGRDDISEEVRELAVVGGTGKL 143
+G A+G Y + P + + T G + GS+I + R+ I+E+ RE+AVVGG G+
Sbjct: 95 IGNARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRF 154
Query: 144 RRATG 148
R A G
Sbjct: 155 RMARG 159
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,261,534
Number of extensions: 117404
Number of successful extensions: 252
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 253
Number of HSP's successfully gapped: 14
Length of query: 204
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 110
Effective length of database: 8,529,465
Effective search space: 938241150
Effective search space used: 938241150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)