BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0106000 Os07g0106000|AK073089
(1016 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11800.1 | chr4:7093666-7098519 REVERSE LENGTH=1014 1505 0.0
AT4G23000.1 | chr4:12055241-12060028 FORWARD LENGTH=1016 1500 0.0
>AT4G11800.1 | chr4:7093666-7098519 REVERSE LENGTH=1014
Length = 1013
Score = 1505 bits (3897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/1013 (68%), Positives = 839/1013 (82%), Gaps = 5/1013 (0%)
Query: 1 MGSDKQSGSPLLGTLKMKSVRTILTHTYPYPHEHSRHIMTAVIIACLFFISSDNMHTLIH 60
M S++ S L +L M+S RTILTHTYPYPHEHSRH + AV+ CLFFISSDNM TLI
Sbjct: 1 MVSERHSAR-LYNSLPMESFRTILTHTYPYPHEHSRHAIIAVLFGCLFFISSDNMQTLIE 59
Query: 61 KLDNNIKWWSMYVCLIGFFYFFSSPFLGRTIQPSYSNFNRWYVAWICFASLYHLPSFQSM 120
K ++KWWSMY CL+GFFYFFSSPF+ +TI+P+YSNF+RWY+AWI A+LYHLP+FQSM
Sbjct: 60 KF--SVKWWSMYACLLGFFYFFSSPFIQKTIRPNYSNFSRWYIAWILVAALYHLPNFQSM 117
Query: 121 GVDMRMNLSLFLTIYFSSVLFIIAFHIVFIGLWYIGLVARMAGTRPGIWTIFQNCTVISI 180
G+D+RMNLSLFLTIY SS+LF++ FHI+F+GLWY+GLV+R+AG RP I TI QNC V+S+
Sbjct: 118 GLDLRMNLSLFLTIYISSILFLVVFHIIFLGLWYVGLVSRVAGRRPEILTILQNCAVLSM 177
Query: 181 ACCVFYSHCGNLAVHKSKSFSRNSDPNLLAFLENEKGTTWISNFLRMNELKDQICSSWFA 240
ACC+FYSHCGN AV + K R + + TW++ F+RMNELKDQ+CSSWFA
Sbjct: 178 ACCIFYSHCGNRAVLRQKPLGRQYTSWFSFWKREHRHNTWLAKFIRMNELKDQVCSSWFA 237
Query: 241 PVGSASDYPLLSKWVIYGELVCSGSCAGPSDEISPLYSLWATFVGLYIANFVVERSTGWA 300
PVGSASDYPLLSKW IYGE+ C+GSC +DEISP+YSLWATF+GLYIAN+VVERSTGWA
Sbjct: 238 PVGSASDYPLLSKWFIYGEIACNGSCPDSADEISPIYSLWATFIGLYIANYVVERSTGWA 297
Query: 301 LTHPSTVLEEEKLK-RQMKPDFLDMVPWYSGTSADLFKTAFDLMVSVTLFVGRFDMRMMQ 359
LTHP +V + EKLK +Q+KPDFLDMVPWYSGTSADLFKT FDL+VSVT+F+GRFDMRM+Q
Sbjct: 298 LTHPLSVDKYEKLKNQQLKPDFLDMVPWYSGTSADLFKTVFDLLVSVTVFLGRFDMRMLQ 357
Query: 360 AAMKRTTDETQNDDLLYDYFNEREDLWFDFVADTGDGGNSSYTVARLLAQPSIQTVIGGS 419
AAM ++ D + +LLYD+ E++D WFDF+ADTGDGGNSSY+VA+LLAQPS++ + +
Sbjct: 358 AAMTKSGDASGRKELLYDHLAEKQDFWFDFMADTGDGGNSSYSVAKLLAQPSLRVPVANN 417
Query: 420 MHTLPRGNLLLIGGDLAYPNPSSFTYEMRFFSPYEYALQPPPWYRAEHIALDKPEVPLGI 479
+LPRGN+LLIGGDLAYPNPSSFTYE R F P+EYALQPP WY+ + IA+DKPE+P G+
Sbjct: 418 FISLPRGNVLLIGGDLAYPNPSSFTYEKRLFCPFEYALQPPRWYKNDSIAVDKPELPNGV 477
Query: 480 SKMKDYDGPQCFIIPGNHDWFDGLHTFMRYVCHKSWLGGWFLPQKKSYFALRLPQGWWVF 539
S +K Y+GPQCF+IPGNHDWFDGL+TFMRY+CHKSWLGGW +PQKKSYFAL+LP+GWWVF
Sbjct: 478 SDLKSYEGPQCFLIPGNHDWFDGLNTFMRYICHKSWLGGWLMPQKKSYFALQLPKGWWVF 537
Query: 540 GLDLALHGDIDVYQFKFFAELCRNKIGENDSVIVMTHEPNWLLDWYWKETTGKNVSHLIQ 599
GLDLALHGDIDV QFKFF+EL ++K+GE+D+VI++THEPNWLLDWYW TG+NV HLI
Sbjct: 538 GLDLALHGDIDVDQFKFFSELVKDKVGESDAVIIITHEPNWLLDWYWSGDTGQNVRHLIC 597
Query: 600 DYLNGRCKLRLAGDLHHFMRHSANQIDNPTSVQHLLVNGCGGAFLHPTHVFKNFEQFSGA 659
D L RCKLR+AGDLHH+MRHS NQ D P VQHLLVNGCGGAFLHPTHVF F +F GA
Sbjct: 598 DVLKYRCKLRMAGDLHHYMRHSCNQSDGPAHVQHLLVNGCGGAFLHPTHVFSKFSKFYGA 657
Query: 660 TYECKAAYPSFDDSSGIALGNILKFRKKNWQFDTIGGFIYFILVFSMFPQCNLGHILNEE 719
+Y K AYPSFDDSS IALGNILKFRKKNWQFD IGG IYFILVFS+FPQC L H+L +
Sbjct: 658 SYGSKVAYPSFDDSSKIALGNILKFRKKNWQFDFIGGIIYFILVFSLFPQCKLAHVLRGD 717
Query: 720 TWSGRLGSFSNTIWSALLYIFEHSYVSSVGSLTLLLASYSFVPSKLSRRKRAIIGGXXXX 779
++SG L SF T+WSA Y+ E SYVS G L LL+ + +FVPSK+S +KR +IG
Sbjct: 718 SFSGHLESFLGTVWSAFAYVMEQSYVSFTGVLMLLITAITFVPSKVSLKKRVVIGVLHVA 777
Query: 780 XXXXXXXXXXXXXXXGIEICIRNHLLATSGYHTLYDWYRSMESEHFPDPTGLRARLEQWT 839
GIEICI+++LLA SGYHTLY+WY+S+E+EHFPDPTGLRAR+EQWT
Sbjct: 778 AHLMAALILMLMLELGIEICIQHNLLANSGYHTLYEWYKSVENEHFPDPTGLRARIEQWT 837
Query: 840 LGLYPACIKYLMSAFDVPEVMAVTRINICKNGMMSLSRSVLMMYYTSVFIYFWIFSTPVV 899
GLYPACIKYLMSAFDVPEVMAVTR NICK+GM SLSRS ++YY SVF+YFW+FSTPVV
Sbjct: 838 FGLYPACIKYLMSAFDVPEVMAVTRTNICKHGMESLSRSGAVIYYASVFLYFWVFSTPVV 897
Query: 900 SLIFGSYLYICINWFHIHFDEAFSSLRIANYKSFTRFHIKKDGNLEIFTLAVDKVPKDWK 959
S++FGSYLYICINWFHIHFDEAFSSLRIANYKSFTRFHI +DG++E+FTLAVDKVPKDWK
Sbjct: 898 SMVFGSYLYICINWFHIHFDEAFSSLRIANYKSFTRFHILEDGDIEVFTLAVDKVPKDWK 957
Query: 960 LDPKWEAEERRPHQLSHHRKHPSKWRSSSS-PDPVTSVRVVDHFTISRTRTSD 1011
LD W++E ++ ++S+ R+ PSKW +S+S DPV +V++VD F I R++ +
Sbjct: 958 LDKDWDSEPKQSFKMSYEREFPSKWGASTSQQDPVNTVKIVDRFVIHRSQKEN 1010
>AT4G23000.1 | chr4:12055241-12060028 FORWARD LENGTH=1016
Length = 1015
Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/1010 (69%), Positives = 831/1010 (82%), Gaps = 3/1010 (0%)
Query: 1 MGSDKQSGSPLLGTLKMKSVRTILTHTYPYPHEHSRHIMTAVIIACLFFISSDNMHTLIH 60
MGSDK S L LKM+ VRTILTHTYPYPHEHSRH M AV++ C+FFISS+NMH+L+
Sbjct: 1 MGSDKNSAR-FLHNLKMERVRTILTHTYPYPHEHSRHAMIAVVLGCMFFISSENMHSLVE 59
Query: 61 KLDNNIKWWSMYVCLIGFFYFFSSPFLGRTIQPSYSNFNRWYVAWICFASLYHLPSFQSM 120
KLDNN KWWSMY CL+GFFYFFSSPF+ +TI+PSYS F+RWY+AWI A+LYHLPSFQSM
Sbjct: 60 KLDNNFKWWSMYACLLGFFYFFSSPFIKKTIRPSYSTFSRWYIAWILVAALYHLPSFQSM 119
Query: 121 GVDMRMNLSLFLTIYFSSVLFIIAFHIVFIGLWYIGLVARMAGTRPGIWTIFQNCTVISI 180
G+D+RMNLSLFLTIY SS++F++ FHI+F+GLWYIGLV+R+AG RP I TI Q+C V+SI
Sbjct: 120 GLDLRMNLSLFLTIYISSIVFLLVFHIIFLGLWYIGLVSRVAGRRPEILTILQSCAVLSI 179
Query: 181 ACCVFYSHCGNLAVHKSKSFSRNSDPNLLAFLENEKGTTWISNFLRMNELKDQICSSWFA 240
+CC+FYSHCGN A + + + + +TW++ F ++EL+DQ+CSSWFA
Sbjct: 180 SCCIFYSHCGNRAFQRQTPLEKRHSSRFSLWKGEDGNSTWLAKFTHIDELRDQVCSSWFA 239
Query: 241 PVGSASDYPLLSKWVIYGELVCSGSCAGPSDEISPLYSLWATFVGLYIANFVVERSTGWA 300
PVGSA DYPLLSKWVIYGEL C+GSC SDEISP+YSLWATF+GLYIAN+VVERSTGWA
Sbjct: 240 PVGSARDYPLLSKWVIYGELACNGSCPDSSDEISPIYSLWATFIGLYIANYVVERSTGWA 299
Query: 301 LTHPSTVLEEEKLKRQ-MKPDFLDMVPWYSGTSADLFKTAFDLMVSVTLFVGRFDMRMMQ 359
L HP +V EKLKRQ MKP+FLDMVPWYSGTSADLFKT FDL+VSVT+F+GRFDMRMMQ
Sbjct: 300 LAHPLSVENYEKLKRQQMKPNFLDMVPWYSGTSADLFKTVFDLLVSVTVFLGRFDMRMMQ 359
Query: 360 AAMKRTTDETQNDDLLYDYFNEREDLWFDFVADTGDGGNSSYTVARLLAQPSIQTVIGGS 419
AAM + D ++ +LLYD+F ++ D WFDF+ADTGDGGNSSY+VA+LLAQP I +
Sbjct: 360 AAMNKDCDGNKSKELLYDHFADKTDFWFDFMADTGDGGNSSYSVAKLLAQPFINVPLDND 419
Query: 420 MHTLPRGNLLLIGGDLAYPNPSSFTYEMRFFSPYEYALQPPPWYRAEHIALDKPEVPLGI 479
+L RGN+LLIGGDLAYPNPS+FTYE R F P+EYALQPP WY+ + I+++KPE+P G+
Sbjct: 420 SISLERGNILLIGGDLAYPNPSAFTYEKRLFCPFEYALQPPHWYKTDSISVNKPELPDGV 479
Query: 480 SKMKDYDGPQCFIIPGNHDWFDGLHTFMRYVCHKSWLGGWFLPQKKSYFALRLPQGWWVF 539
S +K YDGPQCF+IPGNHDWFDGL+TFMRYVCHKSWLGGWF+PQKKSYFAL+LP+GWWVF
Sbjct: 480 SDLKHYDGPQCFLIPGNHDWFDGLNTFMRYVCHKSWLGGWFMPQKKSYFALQLPKGWWVF 539
Query: 540 GLDLALHGDIDVYQFKFFAELCRNKIGENDSVIVMTHEPNWLLDWYWKETTGKNVSHLIQ 599
GLDLALHGDIDVYQF FF++L + K+GEND+VI++THEPNWLLDWYWK+ TGKN+ HLI
Sbjct: 540 GLDLALHGDIDVYQFNFFSKLVKEKVGENDAVIIITHEPNWLLDWYWKDDTGKNMRHLIF 599
Query: 600 DYLNGRCKLRLAGDLHHFMRHSANQIDNPTSVQHLLVNGCGGAFLHPTHVFKNFEQFSGA 659
++L GRCKLR+AGDLHH+MRHS Q D P V HLLVNGCGGAFLHPTHVF+ F +F GA
Sbjct: 600 EFLKGRCKLRMAGDLHHYMRHSCTQSDGPVHVPHLLVNGCGGAFLHPTHVFRCFSKFYGA 659
Query: 660 TYECKAAYPSFDDSSGIALGNILKFRKKNWQFDTIGGFIYFILVFSMFPQCNLGHILNEE 719
+YE K+AYPSF+DSS IALGNILKFRKKNWQFD IGG IYF+LVFS+FPQC LGHIL +
Sbjct: 660 SYESKSAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIIYFLLVFSLFPQCELGHILRGD 719
Query: 720 TWSGRLGSFSNTIWSALLYIFEHSYVSSVGSLTLLLASYSFVPSKLSRRKRAIIGGXXXX 779
++SG LGSF T+WS+ +Y+ E SYVS G L LL+ + FVPSK+SRRKR +IG
Sbjct: 720 SFSGHLGSFFGTVWSSFVYVTEQSYVSFTGVLMLLITAIMFVPSKISRRKRLLIGILHVS 779
Query: 780 XXXXXXXXXXXXXXXGIEICIRNHLLATSGYHTLYDWYRSMESEHFPDPTGLRARLEQWT 839
GIEICI++ LLA SGYHTLY WY+S+E+EHFPDPTGLR R+EQWT
Sbjct: 780 AHLMAALILMLLLELGIEICIQHKLLANSGYHTLYQWYKSVENEHFPDPTGLRDRIEQWT 839
Query: 840 LGLYPACIKYLMSAFDVPEVMAVTRINICKNGMMSLSRSVLMMYYTSVFIYFWIFSTPVV 899
GLYPACIKYLMSAFD+PEVMAVTR NIC+ GM SLSRS +YY SVF+YFW+FSTPVV
Sbjct: 840 FGLYPACIKYLMSAFDIPEVMAVTRTNICREGMESLSRSGAAIYYASVFLYFWVFSTPVV 899
Query: 900 SLIFGSYLYICINWFHIHFDEAFSSLRIANYKSFTRFHIKKDGNLEIFTLAVDKVPKDWK 959
SL+FGSYLYI INW HIHFDEAFSSLRIANYKSFTRFHIK DG+LE+FTL VDKVPK+WK
Sbjct: 900 SLVFGSYLYISINWLHIHFDEAFSSLRIANYKSFTRFHIKPDGDLEVFTLGVDKVPKEWK 959
Query: 960 LDPKWEAEERRPHQLSHHRKHPSKWRSSS-SPDPVTSVRVVDHFTISRTR 1008
LD W+AE R ++SHHR+ PSKW +++ DPV +V++VD F I R+
Sbjct: 960 LDKDWDAEPRSTVKMSHHRRFPSKWCATTLQQDPVNTVKIVDKFVIHRSE 1009
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 24,074,172
Number of extensions: 1090183
Number of successful extensions: 3144
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3134
Number of HSP's successfully gapped: 2
Length of query: 1016
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 908
Effective length of database: 8,145,641
Effective search space: 7396242028
Effective search space used: 7396242028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 117 (49.7 bits)