BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0102300 Os07g0102300|AK101907
         (441 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61900.1  | chr1:22882508-22884722 REVERSE LENGTH=434          409   e-114
AT2G30700.1  | chr2:13082033-13084384 REVERSE LENGTH=481          274   6e-74

>AT1G61900.1 | chr1:22882508-22884722 REVERSE LENGTH=434
          Length = 433

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 204/391 (52%), Positives = 262/391 (67%), Gaps = 1/391 (0%)

Query: 24  FAFAVEEEEDGSGLMPQLSPTGSXXXXXXXXXXXXXXXXXXXXXXXLSGKCSLNFTAVGD 83
           F  ++   +     +P++SP  S                       LSG CSLNF+A   
Sbjct: 19  FLISLCSSQKPEEFLPEISPDTSPQPFLPFIAPSPMVPYINSTMPKLSGLCSLNFSASES 78

Query: 84  LITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLALDPTVATYCLSDVQQ 143
           LI TT+ +C+  FAP LANV+CCPQL A LTI++G++SK+TG LAL+ T + +CLSD++Q
Sbjct: 79  LIQTTSHNCWTVFAPLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQ 138

Query: 144 LLLSQGASDELHNICSLHLSNVTEGSCPVSTVDAFEAVIDSSKLLEACHKIDPVNECCSR 203
           +L+ +GAS +L+ ICS+H SN+T  SCPV  VD FE+ +D++KLL AC KIDPV ECC  
Sbjct: 139 ILVGKGASGQLNKICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEE 198

Query: 204 TCQNAINDASQKISFKDGGLTSYAGSPKVDSCRNVVLRWLSSRLGPSSAKQMLRQISNCN 263
            CQNAI DA+  IS K    T    S +++ C+NVV RWL+++L PS  K+ LR ++NC 
Sbjct: 199 ACQNAILDAATNISLK-ASETLTDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCK 257

Query: 264 VNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHLQKQSFITNLQALDCAQFLGD 323
           +N VCPL FP    +   CS  + N T CC+AM+SYVSHLQKQ+ ITNLQALDCA  LG 
Sbjct: 258 INRVCPLVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGT 317

Query: 324 KLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPSDASFDPATGISFTCDLNDNI 383
           KLQK+N++ N++S C I+LKDFSLQVG+QESGCLLPS+PSDA FD  TGISFTCDLNDNI
Sbjct: 318 KLQKLNITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNI 377

Query: 384 AAPWPXXXXXXXXXXXXXVNIPERPAATSAQ 414
            APWP             V IP  PAA S+Q
Sbjct: 378 PAPWPSSSLSSASTCKKPVRIPALPAAASSQ 408



>AT2G30700.1 | chr2:13082033-13084384 REVERSE LENGTH=481
          Length = 480

 Score =  274 bits (701), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 196/325 (60%), Gaps = 6/325 (1%)

Query: 70  LSGKCSLNFTAVGDLITTTAVDCFASFAPFLANVICCPQLQAMLTILIGQSSKQTGSLAL 129
           L+GKC  +F A+  +I T A DC   FA  + NVICCPQ  ++L I  GQ + ++  L L
Sbjct: 101 LTGKCPTDFQAISSVIDTAASDCSQPFAALVGNVICCPQFVSLLHIFQGQHNVKSNKLVL 160

Query: 130 DPTVATYCLSDVQQLLLSQGASDELHNICSLHLSNVTEGSCPVSTVDAFEAVIDSSKLLE 189
              VAT C SD+  +L+S+ A+  +  +CS+  SN+T GSCPV+ V  FE V++SSKLL+
Sbjct: 161 PDAVATDCFSDIVSILVSRRANMTIPALCSVTSSNLTGGSCPVTDVTTFEKVVNSSKLLD 220

Query: 190 ACHKIDPVNECCSRTCQNAINDASQKISFKD---GGLTSYAGSPKVDS---CRNVVLRWL 243
           AC  +DP+ ECC   CQ AI +A+  IS      G     AGS  V++   C+NVV  +L
Sbjct: 221 ACRTVDPLKECCRPICQPAIMEAALIISGHQMTVGDKIPLAGSNNVNAINDCKNVVFSYL 280

Query: 244 SSRLGPSSAKQMLRQISNCNVNGVCPLSFPDTSKVAKECSGTVKNGTSCCKAMDSYVSHL 303
           S +L    A    R +S+C VN  CPL F + ++V K C        SCC ++++Y+S +
Sbjct: 281 SRKLPADKANAAFRILSSCKVNKACPLEFKEPTEVIKACRNVAAPSPSCCSSLNAYISGI 340

Query: 304 QKQSFITNLQALDCAQFLGDKLQKMNVSMNVYSSCQITLKDFSLQVGSQESGCLLPSMPS 363
           Q Q  ITN QA+ CA  +G  L+K  V  N+Y  C + LKDFS+Q    + GCLL S P+
Sbjct: 341 QNQMLITNKQAIVCATVIGSMLRKGGVMTNIYELCDVDLKDFSVQAYGMQQGCLLRSYPA 400

Query: 364 DASFDPATGISFTCDLNDNIAAPWP 388
           D  FD  +G SFTCDL DNIAAPWP
Sbjct: 401 DLIFDNTSGYSFTCDLTDNIAAPWP 425



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.131    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,594,865
Number of extensions: 322465
Number of successful extensions: 754
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 751
Number of HSP's successfully gapped: 2
Length of query: 441
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 339
Effective length of database: 8,310,137
Effective search space: 2817136443
Effective search space used: 2817136443
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)