BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0728700 Os06g0728700|AK111637
(451 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288 137 1e-32
AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373 130 2e-30
AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337 129 2e-30
AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388 129 4e-30
AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609 124 8e-29
AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646 124 8e-29
AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299 104 1e-22
AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332 103 2e-22
AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288 100 3e-21
AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294 98 8e-21
AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304 97 1e-20
AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299 53 4e-07
AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268 52 8e-07
AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289 51 1e-06
AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278 51 1e-06
AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338 50 3e-06
>AT5G37260.1 | chr5:14751344-14752972 REVERSE LENGTH=288
Length = 287
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 127/258 (49%), Gaps = 52/258 (20%)
Query: 51 FPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFF 110
F +K RKPYTITKQREKWTE EH+KF+EALKLYGR+WR+I+EH+GTKTAVQIRSHAQKFF
Sbjct: 22 FYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFF 81
Query: 111 SKVVREPG-SNNAIEIXXXXXXXXXXXXXXXXCANSGSDANPATAQLKLAPXX-XXXXXD 168
+KV R+ G S+ +IEI P ++ A D
Sbjct: 82 TKVARDFGVSSESIEIPPPRPKRKPMHPYPRKL------VIPDAKEMVYAELTGSKLIQD 135
Query: 169 QENGSPISVLSAMQSDAFGSSVSNPSTRCTSPASSDDGNNIPTFTSGEDNNVPCEPTVID 228
++N SP SVLSA SD GS G+N P +S E ++ E ++
Sbjct: 136 EDNRSPTSVLSAHGSDGLGSI----------------GSNSPNSSSAELSSHTEESLSLE 179
Query: 229 PSQSHKEIDQDRKDVNNMXXXXXXXXXXXXXXLKLFGRTVVIPDPRKRSSSDPKHESEEQ 288
E Q LKLFG+T V+ D S D + +++
Sbjct: 180 A-----ETKQ---------------------SLKLFGKTFVVGDYNSSMSCDDSEDGKKK 213
Query: 289 ISQPSNEEMLQASSSVGE 306
+ S + LQ SSS E
Sbjct: 214 L--YSETQSLQCSSSTSE 229
>AT1G18330.2 | chr1:6306196-6307718 REVERSE LENGTH=373
Length = 372
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%), Gaps = 5/78 (6%)
Query: 53 VKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 112
VKVRKPYT+TKQREKW+EEEHD+FLEA+KLYGR WRQIQEHIGTKTAVQIRSHAQKFFSK
Sbjct: 64 VKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSK 123
Query: 113 VVREP-----GSNNAIEI 125
+ +E GS AI I
Sbjct: 124 MAQEADSRSEGSVKAIVI 141
>AT3G10113.1 | chr3:3118043-3119391 REVERSE LENGTH=337
Length = 336
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 67/78 (85%), Gaps = 5/78 (6%)
Query: 53 VKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 112
VKVRKPYT+TKQREKW+EEEHD+FLEA+KLYGR WRQIQEHIGTKTAVQIRSHAQKFFSK
Sbjct: 53 VKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSK 112
Query: 113 VVREP-----GSNNAIEI 125
+ +E GS AI I
Sbjct: 113 MAQEADSRSEGSVKAIVI 130
>AT5G17300.1 | chr5:5690435-5692435 REVERSE LENGTH=388
Length = 387
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 117/228 (51%), Gaps = 23/228 (10%)
Query: 47 GMEEFPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHA 106
G ++ KVRKPYTITK+RE+WT+EEH KF+EALKLYGR+WR+I+EH+G+KTAVQIRSHA
Sbjct: 37 GGNDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHA 96
Query: 107 QKFFSKVVREP--GSNNAIEIXXXXXXXXXXXXXXXXCANSGSDANPATAQLKLAPXXXX 164
QKFFSKV RE G +++E G++A+ + +
Sbjct: 97 QKFFSKVAREATGGDGSSVEPIVIPPPRPKRKPAHPYPRKFGNEADQTSRSV-------- 148
Query: 165 XXXDQENGSPISVLSAMQSDAFGSSVSNPSTRCTSPASSDDGNNIPTFTSGEDNNVPCEP 224
+++ SP SVLS + S+A S S+ R SP SS T T+ +
Sbjct: 149 SPSERDTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAALTTTANAPEELETLK 208
Query: 225 TVIDPSQSHKEIDQDRKDVNNMXXXXXXXXXXXXXXLKLFGRTVVIPD 272
+ PS+ + LKLFG+TV++ D
Sbjct: 209 LELFPSE-------------RLLNRESSIKEPTKQSLKLFGKTVLVSD 243
>AT2G46830.1 | chr2:19246005-19248717 FORWARD LENGTH=609
Length = 608
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 66/75 (88%)
Query: 42 MQPNEGMEEFPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQ 101
M+ N E+ +K RKPYTITKQRE+WTEEEH++F+EAL+LYGR+W++I+EH+ TKTAVQ
Sbjct: 1 METNSSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQ 60
Query: 102 IRSHAQKFFSKVVRE 116
IRSHAQKFFSKV +E
Sbjct: 61 IRSHAQKFFSKVEKE 75
>AT1G01060.1 | chr1:33992-37061 REVERSE LENGTH=646
Length = 645
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 65/75 (86%)
Query: 42 MQPNEGMEEFPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQ 101
M N EE K RKPYTITKQRE+WTE+EH++FLEAL+LYGR+W++I+EHIGTKTAVQ
Sbjct: 1 MDTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQ 60
Query: 102 IRSHAQKFFSKVVRE 116
IRSHAQKFF+K+ +E
Sbjct: 61 IRSHAQKFFTKLEKE 75
>AT3G09600.1 | chr3:2946459-2948270 FORWARD LENGTH=299
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 53/60 (88%)
Query: 54 KVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKV 113
KVRKPYTITK RE WTEEEHDKFLEAL+L+ R W++I++ +G+KT +QIRSHAQK+F KV
Sbjct: 32 KVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 91
>AT5G52660.2 | chr5:21359423-21362037 REVERSE LENGTH=332
Length = 331
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 35 ASATVTAMQPNEGMEEFPVKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHI 94
A A VTAM + E+ K+RKPYTITK RE WTE EHDKFLEAL+L+ R W++I+ I
Sbjct: 43 AVADVTAMV-SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFI 101
Query: 95 GTKTAVQIRSHAQKFFSKV 113
G+KT +QIRSHAQK+F KV
Sbjct: 102 GSKTVIQIRSHAQKYFLKV 120
>AT1G01520.1 | chr1:190596-192139 FORWARD LENGTH=288
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 54 KVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKV 113
KVRKPYTITK RE WTE+EHDKFLEAL L+ R W++I+ +G+KT +QIRSHAQK+F KV
Sbjct: 50 KVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKV 109
>AT5G02840.1 | chr5:648794-651212 FORWARD LENGTH=294
Length = 293
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 51/60 (85%)
Query: 54 KVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKV 113
KVRK YTITK RE WTE EHDKFLEAL+L+ R W++I++ +G+KT +QIRSHAQK+F KV
Sbjct: 37 KVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 96
>AT4G01280.2 | chr4:535288-536854 FORWARD LENGTH=304
Length = 303
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 53 VKVRKPYTITKQREKWTEEEHDKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 112
K+RKPYTI K RE WT++EHDKFLEAL L+ R W++I+ +G+KT VQIRSHAQK+F K
Sbjct: 47 TKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLK 106
Query: 113 VVREPGSNNAI 123
V++ G+N +
Sbjct: 107 -VQKSGANEHL 116
>AT2G38090.1 | chr2:15945278-15946775 FORWARD LENGTH=299
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 60 TITKQREK---WTEEEHDKFLEALKLYGRS-WRQI-QEHIGTKTAVQIRSHAQKFFSKVV 114
T +R+K WTEEEH +FL LK YG+ WR I + + T+T Q+ SHAQK+F + V
Sbjct: 132 TAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQV 191
>AT5G01200.1 | chr5:77116-78294 FORWARD LENGTH=268
Length = 267
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 5/53 (9%)
Query: 63 KQREK---WTEEEHDKFLEALKLYGRS-WRQI-QEHIGTKTAVQIRSHAQKFF 110
K+R+K WTE+EH +FL LK YG+ WR I + + T+T Q+ SHAQK+F
Sbjct: 140 KERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYF 192
>AT5G58900.1 | chr5:23783275-23784667 REVERSE LENGTH=289
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 56 RKPYTITKQREKWTEEEHDKFLEALKLYGRS-WRQIQEH-IGTKTAVQIRSHAQKFF 110
R P K+ WTEEEH FL LK YG+ WR I + + T+T Q+ SHAQK+F
Sbjct: 131 RSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF 187
>AT5G05790.1 | chr5:1740724-1741671 REVERSE LENGTH=278
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 68 WTEEEHDKFLEALKLYGRS-WRQI-QEHIGTKTAVQIRSHAQKFFSK 112
WTEEEH +FL L YG+ WR I + +G+KT Q+ SHAQK++ +
Sbjct: 133 WTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR 179
>AT5G23650.1 | chr5:7969812-7971019 FORWARD LENGTH=338
Length = 337
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 68 WTEEEHDKFLEALKLYGRS-WRQIQEH-IGTKTAVQIRSHAQKFFSKVVRE 116
W EH +FL LK YG+ WR I H + T+T+ Q+ SHAQK+F+ + E
Sbjct: 122 WKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSE 172
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.311 0.127 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,024,616
Number of extensions: 353941
Number of successful extensions: 1038
Number of sequences better than 1.0e-05: 16
Number of HSP's gapped: 1052
Number of HSP's successfully gapped: 16
Length of query: 451
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 349
Effective length of database: 8,310,137
Effective search space: 2900237813
Effective search space used: 2900237813
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 113 (48.1 bits)