BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0714300 Os06g0714300|AK107043
(141 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137 69 1e-12
AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123 68 2e-12
AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122 67 4e-12
AT5G53590.1 | chr5:21772107-21772535 FORWARD LENGTH=143 64 3e-11
AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171 61 2e-10
AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191 56 8e-09
AT4G34770.1 | chr4:16591352-16591666 FORWARD LENGTH=105 55 1e-08
AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163 51 2e-07
AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190 51 2e-07
AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179 51 2e-07
AT4G22620.1 | chr4:11907631-11908113 FORWARD LENGTH=161 51 2e-07
AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161 50 3e-07
AT4G12410.1 | chr4:7342956-7343429 REVERSE LENGTH=158 50 4e-07
AT4G34780.1 | chr4:16592397-16592717 REVERSE LENGTH=107 50 6e-07
AT4G38825.1 | chr4:18121612-18121881 FORWARD LENGTH=90 48 1e-06
AT3G12830.1 | chr3:4079117-4079515 REVERSE LENGTH=133 48 2e-06
AT3G03850.1 | chr3:983197-983478 FORWARD LENGTH=94 48 2e-06
AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100 48 2e-06
AT2G21220.1 | chr2:9089380-9089694 FORWARD LENGTH=105 48 2e-06
AT1G56150.1 | chr1:21017432-21017764 FORWARD LENGTH=111 47 2e-06
AT2G28085.1 | chr2:11968182-11968556 REVERSE LENGTH=125 47 2e-06
AT3G03820.1 | chr3:976933-977223 REVERSE LENGTH=97 47 4e-06
AT5G18060.1 | chr5:5976030-5976302 FORWARD LENGTH=91 47 4e-06
AT4G34800.1 | chr4:16596860-16597144 FORWARD LENGTH=95 47 5e-06
AT2G21210.1 | chr2:9085513-9085809 REVERSE LENGTH=99 45 9e-06
AT1G79130.1 | chr1:29771319-29771723 FORWARD LENGTH=135 45 9e-06
>AT3G61900.1 | chr3:22925813-22926379 FORWARD LENGTH=137
Length = 136
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIHHQK 103
PV Y HPLF+ LL+EAEEE+GFEQKG ITIPC V+ FR VQ +I+ ++
Sbjct: 52 PVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRER 100
>AT4G00880.1 | chr4:366692-367060 REVERSE LENGTH=123
Length = 122
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 35/45 (77%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGII 99
PV Y HPLF LLKEAEEEFGF QKG ITIPC V+ FR VQG+I
Sbjct: 49 PVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEFRYVQGLI 93
>AT2G46690.1 | chr2:19180904-19181269 FORWARD LENGTH=122
Length = 121
Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGII 99
PV Y HPLF+ LLKEAE+E+GF+QKG ITIPC V+ FR VQ +I
Sbjct: 46 PVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEFRYVQALI 90
>AT5G53590.1 | chr5:21772107-21772535 FORWARD LENGTH=143
Length = 142
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGII 99
P+ +L HPLF+ LLKEAE+E+GF+ G ITIPCGVD F+ VQ +I
Sbjct: 70 PLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHVQEVI 114
>AT3G60690.1 | chr3:22435262-22435774 FORWARD LENGTH=171
Length = 170
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 32/47 (68%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIHH 101
P+ Y HPLF LL+EAEEEFGF Q+G ITIPC F+RVQ I
Sbjct: 110 PIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSDFKRVQTRIES 156
>AT5G20810.2 | chr5:7044791-7045363 FORWARD LENGTH=191
Length = 190
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFR 93
P YL H LF LL++AEEEFGF+Q GA+TIPC V+ F+
Sbjct: 98 PTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFK 136
>AT4G34770.1 | chr4:16591352-16591666 FORWARD LENGTH=105
Length = 104
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQ-KGAITIPCGVDHFRRVQGII 99
P+ YL HPLF GLL AEEEFGF+ G +TIPC D+F + I+
Sbjct: 56 PISYLNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASIL 101
>AT2G45210.1 | chr2:18641884-18642372 FORWARD LENGTH=163
Length = 162
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGII 99
P+ Y HPLF LL+EAE+E+GF +G ITIPC F RV+ I
Sbjct: 101 PIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERVKTRI 145
>AT4G31320.1 | chr4:15193993-15194562 REVERSE LENGTH=190
Length = 189
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 29/49 (59%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIHHQK 103
P YL H F LL+EAEEEFGFEQ G + IPC V F + I+ K
Sbjct: 99 PTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAVFESILKIMEDNK 147
>AT2G24400.1 | chr2:10377993-10378529 REVERSE LENGTH=179
Length = 178
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIHHQ 102
P YL H F LL+EAEEEFGF+Q G + IPC V F + I+ +
Sbjct: 83 PTEYLSHQAFYVLLREAEEEFGFQQAGVLRIPCEVSVFESILKIMEEK 130
>AT4G22620.1 | chr4:11907631-11908113 FORWARD LENGTH=161
Length = 160
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 28/42 (66%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQ 96
PV Y HPLF LL++AE +GFEQ G I IPC V F +VQ
Sbjct: 101 PVIYFNHPLFGELLEQAERVYGFEQPGRIMIPCRVSDFEKVQ 142
>AT3G43120.1 | chr3:15094644-15095312 FORWARD LENGTH=161
Length = 160
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIHH 101
P +L H LF LL++AEEE+GF+ GA+TIPC V+ F+ + I +
Sbjct: 98 PTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLLKCIEN 144
>AT4G12410.1 | chr4:7342956-7343429 REVERSE LENGTH=158
Length = 157
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 28/42 (66%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQ 96
PV Y HPLF LL++AE GF+Q G ITIPC V F +VQ
Sbjct: 98 PVIYFNHPLFGELLEQAERVHGFDQPGRITIPCRVSDFEKVQ 139
>AT4G34780.1 | chr4:16592397-16592717 REVERSE LENGTH=107
Length = 106
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFE-QKGAITIPCGVDHFRRVQGIIHHQK 103
P+ YL HPLF LL++AE+EFG + Q+ +TIPC D F + + K
Sbjct: 50 PISYLNHPLFQALLRKAEDEFGTDHQRTYLTIPCAKDVFLDITSRLKRNK 99
>AT4G38825.1 | chr4:18121612-18121881 FORWARD LENGTH=90
Length = 89
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQK-GAITIPCGVDHFRRVQGIIH 100
PV YL P F LL ++E+EFGF+ G +TIPC VD F V +H
Sbjct: 43 PVSYLNQPSFQALLSKSEQEFGFDHPMGGLTIPCPVDTFITVTSQLH 89
>AT3G12830.1 | chr3:4079117-4079515 REVERSE LENGTH=133
Length = 132
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 59 LKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRV 95
L HP+F+GLL + +E+G+EQKG + IPC V F R+
Sbjct: 73 LNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERI 109
>AT3G03850.1 | chr3:983197-983478 FORWARD LENGTH=94
Length = 93
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQK-GAITIPCGVDHFRRV 95
PV YL PLF LL + EEEFGF+ G +TIPC VD F +
Sbjct: 46 PVSYLNQPLFQDLLSKCEEEFGFDHPMGGLTIPCPVDTFISI 87
>AT5G66260.1 | chr5:26471269-26471658 FORWARD LENGTH=100
Length = 99
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGIIH 100
P+ +L HP+F LL+++EEEFGF Q +TIPC FR + I+
Sbjct: 53 PISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFRALISSIN 98
>AT2G21220.1 | chr2:9089380-9089694 FORWARD LENGTH=105
Length = 104
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRVQGII 99
P+ +L HP F LL++AEEEFGF +TIPC FR + +I
Sbjct: 59 PISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
>AT1G56150.1 | chr1:21017432-21017764 FORWARD LENGTH=111
Length = 110
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 59 LKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRV 95
L HP+FV LLK++ +E+G+EQ+G + IPC V F R+
Sbjct: 61 LNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97
>AT2G28085.1 | chr2:11968182-11968556 REVERSE LENGTH=125
Length = 124
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRV 95
P+ +L+HP+F LL++AEEE+GF GA+ +PC H R +
Sbjct: 78 PLMFLEHPMFRKLLEQAEEEYGFYHDGALMVPCRPSHLRMI 118
>AT3G03820.1 | chr3:976933-977223 REVERSE LENGTH=97
Length = 96
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQK-GAITIPCGVDHFRRVQGIIH 100
PV YL PLF LL +AEEEFGF G +TIPC D F V I
Sbjct: 49 PVSYLNQPLFQALLIKAEEEFGFNHPMGGLTIPCPEDTFLTVTSQIQ 95
>AT5G18060.1 | chr5:5976030-5976302 FORWARD LENGTH=91
Length = 90
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQK-GAITIPCGVDHFRRVQGIIH 100
P+ YL P F LL ++EEEFGF+ G +TIPC D F V +H
Sbjct: 44 PLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90
>AT4G34800.1 | chr4:16596860-16597144 FORWARD LENGTH=95
Length = 94
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQK-GAITIPCGVDHF 92
P+ YL HP F GLL AEEEFGF G +TIPC + F
Sbjct: 43 PISYLNHPSFQGLLSRAEEEFGFNHPIGGLTIPCREETF 81
>AT2G21210.1 | chr2:9085513-9085809 REVERSE LENGTH=99
Length = 98
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 55 PVGYLKHPLFVGLLKEAEEEFGFEQ-KGAITIPC 87
PV YL HP F LL++AEEEFGF+ G +TIPC
Sbjct: 49 PVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPC 82
>AT1G79130.1 | chr1:29771319-29771723 FORWARD LENGTH=135
Length = 134
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 59 LKHPLFVGLLKEAEEEFGFEQKGAITIPCGVDHFRRV 95
L HP+FVGLL + +E+G+ QKG + IPC V F +V
Sbjct: 71 LNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQV 107
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.329 0.145 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,751,922
Number of extensions: 41444
Number of successful extensions: 162
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 27
Length of query: 141
Length of database: 11,106,569
Length adjustment: 89
Effective length of query: 52
Effective length of database: 8,666,545
Effective search space: 450660340
Effective search space used: 450660340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 106 (45.4 bits)