BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0713000 Os06g0713000|AK105957
(308 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332 137 7e-33
AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243 130 9e-31
AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249 125 2e-29
AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320 120 1e-27
AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239 118 3e-27
AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163 115 3e-26
AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173 80 1e-15
AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356 72 4e-13
AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295 70 2e-12
AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407 67 9e-12
AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348 67 1e-11
AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374 67 1e-11
AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434 63 2e-10
AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333 63 3e-10
AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356 60 1e-09
AT2G33500.1 | chr2:14188159-14190046 REVERSE LENGTH=403 59 3e-09
AT4G38960.3 | chr4:18161576-18163045 FORWARD LENGTH=227 58 7e-09
AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373 56 3e-08
AT1G68190.1 | chr1:25559384-25561004 FORWARD LENGTH=357 55 4e-08
AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374 54 1e-07
AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331 50 1e-06
>AT1G75540.1 | chr1:28366059-28367398 FORWARD LENGTH=332
Length = 331
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M+++CDVC E A+V C ADEA+LC CD +VH AN+LASKH R L++P
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSS--- 57
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAALAE 120
PLCD+C++K+ L+FC +DRAILC DCD IH+AN+ T KH RFLL G KLS +
Sbjct: 58 ---PLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVY 114
Query: 121 QP 122
+P
Sbjct: 115 KP 116
>AT4G39070.1 | chr4:18205061-18206421 REVERSE LENGTH=243
Length = 242
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 76/116 (65%), Gaps = 8/116 (6%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M++ C VC E A+V CCADEAALC+ CDR VH AN+LA KH R L P
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDA----- 55
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPA 116
PLCD+C E+R L+FC EDRAILC +CD PIH AN+ T KH RFLL G K+S +
Sbjct: 56 ---PLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISAS 108
>AT1G06040.1 | chr1:1828662-1829659 REVERSE LENGTH=249
Length = 248
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 74/114 (64%), Gaps = 9/114 (7%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M++QCDVC PA V+CCADEAALC CD +H AN+LASKH+RL L
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHL---------NSLS 51
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLS 114
P CD+C+EK +FCVEDRA+LC DCDE IH AN +A H RFL G K++
Sbjct: 52 TKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVA 105
>AT1G78600.2 | chr1:29567370-29568662 FORWARD LENGTH=320
Length = 319
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M++QC+VC A A VLCCADEAALC ACD ++H AN+LA KH+R+PL
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL---------SASA 51
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAALAE 120
P CD+C+E G FC++DRA+LC CD IH+ N + H RFLL G K+ ++
Sbjct: 52 SSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDT 111
Query: 121 QP 122
P
Sbjct: 112 GP 113
>AT2G31380.1 | chr2:13382150-13383302 FORWARD LENGTH=239
Length = 238
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M++QCDVC PA ++CCADEAALC+ CD VH AN+LASKH+RL L
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFL---------DSLS 51
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAALA 119
P CD+C EK +FCVEDRA+LC DCDE H+ N +A H RFL G +++ ++ +
Sbjct: 52 TKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTS 110
>AT4G10240.1 | chr4:6368967-6369526 REVERSE LENGTH=163
Length = 162
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M++QC+VC A VLCC+DEA LC CD +VH AN+L +H R+ L
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVAL---QKDAASATTA 57
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAALAE 120
PLCD+C+E++G FC+EDRA+LC DCDE IH+ N H RFLL G ++S +L E
Sbjct: 58 SGAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQSLTE 113
Query: 121 QP 122
Sbjct: 114 NS 115
>AT2G21320.1 | chr2:9126502-9127652 FORWARD LENGTH=173
Length = 172
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
MR+ CD C + A V C ADEAALC +CD +VH+ N+LAS+H R+ L P
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADP---------- 50
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKL 113
P CD+C +C D + LC CD +H T H RFLL+ ++
Sbjct: 51 SNAPSCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFLLLRQRI 101
>AT5G15850.1 | chr5:5176297-5177473 REVERSE LENGTH=356
Length = 355
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + V C AD A LCS+CD +VH ANRLAS+H R+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERV------------------R 53
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
+C C FC D A LC CD IHSAN L +H R
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLV 48
C C PAA C AD A+LC+ CD +H AN LA +H+R+P++
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPIL 98
>AT2G24790.1 | chr2:10566959-10567946 FORWARD LENGTH=295
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + A + C AD A LC CD ++H AN+LAS+H R+
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERV------------------W 49
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
LC+VC + V C D A LC CD IHSAN L+ +H R
Sbjct: 50 LCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLV 48
C+VC PA V C AD AALC CDR +H AN L+ +H R+P+
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPIT 94
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLL 108
LCD C+ +FC D A LC DCD IH+AN L ++H R L
Sbjct: 7 LCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL 50
>AT5G24930.1 | chr5:8589325-8590949 FORWARD LENGTH=407
Length = 406
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + AA+ C D A LC +CD +VH AN+LAS+H R+
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARV------------------W 91
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
+C+VC + V C D A LC CD IHSAN L +H R
Sbjct: 92 MCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 132
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLV 48
C+VC PA V C AD AALC CDR +H AN LA +H R+P+
Sbjct: 93 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
>AT3G02380.1 | chr3:487438-488624 REVERSE LENGTH=348
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 46/101 (45%), Gaps = 18/101 (17%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + V C AD A LC+ CD RVH ANR+AS+H R+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERV------------------R 57
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
+C C C D A LC CD IHSAN L +H R
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLV 48
C C + PAA LC AD A+LC+ACD +H AN LA +H+R+P++
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPIL 102
>AT5G15840.1 | chr5:5171343-5172697 REVERSE LENGTH=374
Length = 373
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + V C AD A LC +CD +VH ANR+AS+H+R+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRV------------------R 61
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
+C+ C C D A LC CD +HSAN L +H R
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLV 48
C+ C PAA LC AD+A+LC+ACD VH AN LA +H+R+P++
Sbjct: 63 CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPIL 106
>AT1G28050.1 | chr1:9775768-9777657 REVERSE LENGTH=434
Length = 433
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 2 RVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXX 61
RV CD C A + C AD A LC CD++VH AN L+ KH R
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR----------------- 48
Query: 62 XXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAAL 118
+CD C + V C D ILC +CD +H + ++ H R + G P+AL
Sbjct: 49 -SQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSAL 104
>AT2G47890.1 | chr2:19608245-19609476 FORWARD LENGTH=333
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 20/101 (19%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXXP 64
CD C + A V C AD A LC ACD++VH AN+L +KH R
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR------------------SL 54
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
LCD C E +FC +R++LC +CD H+A+ ++ H+R
Sbjct: 55 LCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSR 93
>AT5G57660.1 | chr5:23355573-23356729 FORWARD LENGTH=356
Length = 355
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 4 QCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXXX 63
CD C + AAV C D A LC ACD R+H R H R+ +
Sbjct: 21 SCDACKSVTAAVFCRVDSAFLCIACDTRIHSFTR----HERVWV---------------- 60
Query: 64 PLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
C+VC + V C D A LC CD IHSAN L ++H R
Sbjct: 61 --CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 5 CDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPL 47
C+VC PAAV C AD AALC +CD +H AN LAS+H R+P+
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPV 103
>AT2G33500.1 | chr2:14188159-14190046 REVERSE LENGTH=403
Length = 402
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 3 VQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXXXX 62
V C+ C A + C AD A LC CD+ VH AN L+ KH R
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR------------------ 51
Query: 63 XPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKLSPAAL 118
+CD C ++ V C D +LC +CD +H + +A H R + G P+ L
Sbjct: 52 SQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVL 107
>AT4G38960.3 | chr4:18161576-18163045 FORWARD LENGTH=227
Length = 226
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 56/156 (35%), Gaps = 55/156 (35%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRR----------------------------- 31
MR+ CD C A + C ADEAALC CD +
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60
Query: 32 --------------VHRANRLASKHRRLPLVHPXXXXXXXXXXXXXPLCDVCREKRGLVF 77
VH N+LAS+H R+ L P P CD+C +
Sbjct: 61 IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNA----------PCCDICENAPAFFY 110
Query: 78 CVEDRAILCADCDEPIHSANDLTAKHTRFLLVGAKL 113
C D + LC CD +H T H RFLL+ ++
Sbjct: 111 CEIDGSSLCLQCDMVVHVGGKRT--HGRFLLLRQRI 144
>AT3G07650.1 | chr3:2442494-2443901 FORWARD LENGTH=373
Length = 372
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M CD C + + V C +D A LC +CDR VH AN L+ +H R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRT--------------- 45
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIH 94
+C+ C + V CVE+R LC +CD H
Sbjct: 46 ---LVCERCNAQPATVRCVEERVSLCQNCDWSGH 76
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLL 108
+CD C E+R +V+C D A LC CD +HSAN L+ +H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV 47
>AT1G68190.1 | chr1:25559384-25561004 FORWARD LENGTH=357
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 20/105 (19%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M C+ C A A V C AD A LC CD +VH AN L+ +H R
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLR---------------- 53
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTR 105
LCD C+ + +V C + + LC C++ H +++H R
Sbjct: 54 --TVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLL 108
+C+ C+ R +V+C+ D A LC CD +HSAN L+ +H R +L
Sbjct: 13 VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL 56
>AT5G48250.1 | chr5:19561719-19563113 REVERSE LENGTH=374
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M CD C + + V C +D A LC +CDR VH AN L+ +H R
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRT--------------- 45
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADCDEPIHSA-NDLTAKH 103
+C+ C + V C ++R LC +CD H N T H
Sbjct: 46 ---LVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSH 86
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 65 LCDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLL 108
+CD C E+R +V+C D A LC CD +HSAN L+ +H+R L+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV 47
>AT4G15250.1 | chr4:8709942-8711106 REVERSE LENGTH=331
Length = 330
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 66 CDVCREKRGLVFCVEDRAILCADCDEPIHSANDLTAKHTRFLL 108
CD C ++ L++C D A LC +CD +HSAN L+ +HTR LL
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL 47
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 18/89 (20%)
Query: 1 MRVQCDVCAAEPAAVLCCADEAALCSACDRRVHRANRLASKHRRLPLVHPXXXXXXXXXX 60
M +CD C E A + C +D A LC CD VH AN L+ +H R
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR---------------- 44
Query: 61 XXXPLCDVCREKRGLVFCVEDRAILCADC 89
LC+ C + V C+ + LC C
Sbjct: 45 --SLLCEKCSLQPTAVHCMNENVSLCQGC 71
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.325 0.139 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,556,796
Number of extensions: 136239
Number of successful extensions: 398
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 353
Number of HSP's successfully gapped: 42
Length of query: 308
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 210
Effective length of database: 8,419,801
Effective search space: 1768158210
Effective search space used: 1768158210
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)