BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0711800 Os06g0711800|AK069642
(200 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62770.1 | chr1:23246085-23246836 REVERSE LENGTH=205 119 1e-27
AT5G62350.1 | chr5:25037504-25038112 FORWARD LENGTH=203 108 2e-24
AT1G14890.1 | chr1:5137045-5137704 FORWARD LENGTH=220 107 4e-24
AT4G25260.1 | chr4:12936005-12936610 REVERSE LENGTH=202 106 9e-24
AT4G12390.1 | chr4:7336553-7337173 FORWARD LENGTH=207 103 9e-23
AT3G47380.1 | chr3:17457795-17458403 FORWARD LENGTH=203 100 7e-22
AT1G62760.1 | chr1:23237574-23238512 REVERSE LENGTH=313 98 3e-21
AT2G01610.1 | chr2:274124-274792 REVERSE LENGTH=223 98 3e-21
AT1G23205.1 | chr1:8234234-8234851 REVERSE LENGTH=206 98 3e-21
AT5G62360.1 | chr5:25040699-25041310 FORWARD LENGTH=204 91 5e-19
AT1G70720.1 | chr1:26666427-26667029 FORWARD LENGTH=201 89 1e-18
AT5G20740.1 | chr5:7025867-7026484 REVERSE LENGTH=206 89 1e-18
AT4G00080.1 | chr4:32946-33575 FORWARD LENGTH=210 85 2e-17
AT4G25250.1 | chr4:12934632-12935231 FORWARD LENGTH=200 85 2e-17
AT5G51520.1 | chr5:20925980-20926594 FORWARD LENGTH=205 81 3e-16
AT3G62820.1 | chr3:23229782-23230366 FORWARD LENGTH=195 58 4e-09
AT2G47670.1 | chr2:19544131-19544757 REVERSE LENGTH=209 49 2e-06
>AT1G62770.1 | chr1:23246085-23246836 REVERSE LENGTH=205
Length = 204
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 92/167 (55%), Gaps = 4/167 (2%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
FI SC+ TQYP++CV ++LA+ AL +S+ +A+S + +V +
Sbjct: 33 FIVSSCQTTQYPSLCVHTLSAYATKIRHNND--QDLAQTALIISLARAKSVTIFVAKLTK 90
Query: 92 XXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCSA 151
++DC+E + +SV L + +EL S F W +SNVQTW SA
Sbjct: 91 ETPKFKRREYLA-IKDCIEVLGNSVDRLAQSVKELARAGHAVASEDFMWKMSNVQTWVSA 149
Query: 152 ALTDENTCLDGLS-RGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
ALTDE TCLDG S R + + IR K+V VAQVTSNALALVN+ A
Sbjct: 150 ALTDETTCLDGFSERAMGGKVKRLIRYKVVHVAQVTSNALALVNQFA 196
>AT5G62350.1 | chr5:25037504-25038112 FORWARD LENGTH=203
Length = 202
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
+FI+ SC+ T YPA+CV + LA A++V++ +A+S +V +
Sbjct: 37 NFIQSSCKTTTYPALCVHSLSVYANDIQTSP---KRLAETAIAVTLSRAQSTKLFVSRL- 92
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCS 150
++DC+E M D+V L + QEL F +H+SN QTW S
Sbjct: 93 -TRMKGLKKREVEAIKDCVEEMNDTVDRLTKSVQELKLCGSAKDQDQFAYHMSNAQTWTS 151
Query: 151 AALTDENTCLDGLS-RGVDAATRSAIRGKIVEVAQVTSNALALVNRVAP 198
AALTDENTC DG S R +D ++++R +I+ V TSNAL+L+N A
Sbjct: 152 AALTDENTCSDGFSGRVMDGRIKNSVRARIMNVGHETSNALSLINAFAK 200
>AT1G14890.1 | chr1:5137045-5137704 FORWARD LENGTH=220
Length = 219
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
DFIR SC T YP VC LA+ A+ VS+ +A+ + Y+ +
Sbjct: 57 DFIRTSCNTTLYPDVCYTSLAGYASAVQDNPA---RLAKLAIGVSLSRAKYTAAYLSKL- 112
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQEL-GGNMGRAGSPGFKWHLSNVQTWC 149
V DC+ N+ D+V +R + ++L N R G P F++ +SNVQTW
Sbjct: 113 ------SRRAASAAVHDCVSNVGDAVDQMRGSLRQLREMNHRRPGDPAFRFQMSNVQTWM 166
Query: 150 SAALTDENTCLDGLSRGV-DAATRSAIRGKIVEVAQVTSNALALVNRVA 197
SAALTDE TC DG++ + D T++AI ++ +V + TSNALALVN A
Sbjct: 167 SAALTDEETCTDGVTEEMEDGETKTAICDRVADVKRFTSNALALVNTYA 215
>AT4G25260.1 | chr4:12936005-12936610 REVERSE LENGTH=202
Length = 201
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
+FI+ SC T YP C Q R+LA AL+VS+ +A+SA TYV +
Sbjct: 36 EFIKASCETTSYPDRCFQSLSSYASEIKKQP---RKLAETALAVSIARAKSAKTYVSEM- 91
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCS 150
V DCLE M D+V L ++ +EL F + LSNV+TW S
Sbjct: 92 -TDYKGITKRQHEAVADCLEEMGDTVDRLSNSLKELKHLEEGDSGEDFWFCLSNVRTWTS 150
Query: 151 AALTDENTCLDGL-SRGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
AALTDE C+DG + + +S IR IV VA+ TSNALAL+N A
Sbjct: 151 AALTDETACMDGFGGKAMAGELKSLIRTHIVSVAEETSNALALINDFA 198
>AT4G12390.1 | chr4:7336553-7337173 FORWARD LENGTH=207
Length = 206
Score = 103 bits (256), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 98/170 (57%), Gaps = 9/170 (5%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
+FI SCR T+Y +CV+ +LA+ AL+V++ + +S + YVG +
Sbjct: 38 NFIVSSCRVTRYQTLCVKCLAAFADKIRRNEN---QLAQTALAVTLVRVQSTTIYVGKL- 93
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSP--GFKWHLSNVQTW 148
V+DC+EN+ D + L + +EL +GR+G F W LSNV+TW
Sbjct: 94 -TKARRIKRREYLAVKDCVENLGDGLEMLAQSMRELK-QVGRSGRDRDEFLWRLSNVETW 151
Query: 149 CSAALTDENTCLDGLS-RGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
SAALTDE TCLDG + +D +SAIR ++V VA+VTSNALALVNR A
Sbjct: 152 VSAALTDETTCLDGFDGKVMDGVVKSAIRRRVVHVARVTSNALALVNRFA 201
>AT3G47380.1 | chr3:17457795-17458403 FORWARD LENGTH=203
Length = 202
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
+FI+ SC+AT YP VCV R LA AL+V+V +A+S +V +
Sbjct: 37 NFIQASCKATTYPTVCVNSLTGYANSIQTSP---RRLAETALNVTVTQAQSTKVFVWRL- 92
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCS 150
V+DC+E + D+V L + E+ G F +H+SN QTW S
Sbjct: 93 -GRFTSLKKREIQAVKDCIEEIHDAVDRLTMSIHEVKMCGSAKGRDQFWFHMSNAQTWTS 151
Query: 151 AALTDENTCLDGLS-RGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
AALT+ NTC DG + R +D ++++R +I+ + + TSNALAL+N A
Sbjct: 152 AALTNANTCSDGFAGRVMDGRVKNSVRARILNLGRGTSNALALINAFA 199
>AT1G62760.1 | chr1:23237574-23238512 REVERSE LENGTH=313
Length = 312
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 7/167 (4%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
D+I+ SC T Y +C ++LA AL++++ A+SAS +V +I
Sbjct: 146 DYIKTSCNITLYKTICYNSLSPYASTIRSNP---QKLAVIALNLTLSSAKSASKFVKNI- 201
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCS 150
V DC+E + DSV L+D+ +EL + S F+ +S+V+TW S
Sbjct: 202 -SHGGGLTRLEVVAVADCVEEIGDSVTSLQDSIRELDS-INYKDSAKFEMVMSDVETWVS 259
Query: 151 AALTDENTCLDGLSRGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
AALT+++TC+DG S V A + +R +VEVA++TSNALAL+N A
Sbjct: 260 AALTNDDTCMDGFSL-VKTAVKDLVRRHVVEVARLTSNALALINMYA 305
>AT2G01610.1 | chr2:274124-274792 REVERSE LENGTH=223
Length = 222
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
DFIR SC AT YP VC LA+ A+ VS+ +A+S + ++ +
Sbjct: 43 DFIRTSCNATLYPDVCFTSLSGYASAVQDSPA---RLAKLAIGVSLSQAKSTAAFLSKLS 99
Query: 91 XXXXXXX---XXXXXXXVRDCLENMADSVGHLRDAAQEL-------GGNMGRAGSPGFKW 140
+RDC+ N+ D+V +R + ++L GG R F++
Sbjct: 100 RSAAKYSGDGHQTASAVIRDCVSNVEDAVDEMRGSLRQLRDMNGRGGGTAARRSVETFRF 159
Query: 141 HLSNVQTWCSAALTDENTCLDGLSRGVDAA-TRSAIRGKIVEVAQVTSNALALVNRVA 197
+SNVQTW SAALTDE+TC DG + ++ + ++ EV ++TSNALALVN A
Sbjct: 160 QMSNVQTWMSAALTDEDTCTDGFEDMDEGGLIKTTVCDRLEEVKRLTSNALALVNTYA 217
>AT1G23205.1 | chr1:8234234-8234851 REVERSE LENGTH=206
Length = 205
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
DFIR SC T YP +C LARAA+SV++ K ++Y+ +I
Sbjct: 32 DFIRTSCNTTLYPDLCFSSLSSFSSSVHNDPAL---LARAAISVTLTKTLDLASYLANIT 88
Query: 91 XXXXXXXX-----XXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNV 145
DC +N+ D+V ++ + +++ + F++ +SNV
Sbjct: 89 TLQPESNEDGAHHPTAAAVFHDCFDNLKDAVEEMKGSMKQMRELVSTGSLESFRFQMSNV 148
Query: 146 QTWCSAALTDENTCLDGLSRGVDAATRSAIRGKIVEVAQVTSNALALVNR 195
QTW SAALTDE TC DG D + I ++ +V ++TSNALALVNR
Sbjct: 149 QTWLSAALTDEETCTDGFKDIHDEPRKDDICARVDDVKKMTSNALALVNR 198
>AT5G62360.1 | chr5:25040699-25041310 FORWARD LENGTH=204
Length = 203
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
+F++ SC T YP +C + +A AAL++++ A+ S + +
Sbjct: 42 EFVKSSCTFTTYPRLCFSSLSTHASLIQTSP---KLMAHAALNITLASAKVTSAMMVRL- 97
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCS 150
+RDC+E + D++ LR + G M + ++ ++S++QTW S
Sbjct: 98 --SNSRLKPKEVSAMRDCVEELGDTLEELRKSI----GEMCQLSGSNYEVYISDIQTWVS 151
Query: 151 AALTDENTCLDGLS-RGVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
AALTD NTC DG +D + +RG+I+ +A +TSNALAL+N A
Sbjct: 152 AALTDVNTCTDGFEGEDMDGKVKVLVRGRILVIAHLTSNALALINHFA 199
>AT1G70720.1 | chr1:26666427-26667029 FORWARD LENGTH=201
Length = 200
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
DFIR +C T YP +C LAR A+S+++ +Y+ +
Sbjct: 35 DFIRLACNTTLYPDLCFSTLSSFANSIQNDS---NRLARVAISLTLHNTLHLLSYLQN-- 89
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGS-PGFKWHLSNVQTWC 149
+RDC EN+ D+V +R + +++ + +GS F++ +SNV+TW
Sbjct: 90 ----AYNRDHPTPVLRDCFENLKDAVDGMRGSMKQMKELVSASGSIESFRFQMSNVKTWL 145
Query: 150 SAALTDENTCLDGLSR-GVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
SAALTDE TC DG D + + + ++ +V ++TSNALALVNR A
Sbjct: 146 SAALTDEYTCTDGFKDVHEDDSIKDDVCSRVDDVKKLTSNALALVNRYA 194
>AT5G20740.1 | chr5:7025867-7026484 REVERSE LENGTH=206
Length = 205
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 31 DFIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHIC 90
D + SC YP++CV+ R+LA+AA+ +S+ A+SA+ + +
Sbjct: 32 DIVHSSCEHASYPSLCVRTLSSYSGPTITNR---RDLAQAAIKISLSHAQSAAKKLAVV- 87
Query: 91 XXXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPG-FKWHLSNVQTWC 149
+ DC+E + DSV L L GS F+W +SN QTW
Sbjct: 88 -RDSVGKKKQEKAALVDCVEMIGDSVDELSRTLGVLKHLRVSGGSAKEFRWQMSNAQTWA 146
Query: 150 SAALTDENTCLDGLSRGVDAATRSAIRGKIVEVAQVTSNALALVNRV 196
SAALTD++TCLDG D ++ ++ + +VA+VTSNAL +VN++
Sbjct: 147 SAALTDDDTCLDGFQGMDDGEIKTEVKQWMTKVARVTSNALYMVNQL 193
>AT4G00080.1 | chr4:32946-33575 FORWARD LENGTH=210
Length = 209
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
++ CR T YP +CV+ R+LAR AL S+ +A+ ++
Sbjct: 35 YVHSWCRTTLYPKLCVRSMSRYVRSRAVQNP--RDLARFALKASLYRAKYTKAFLLKEVK 92
Query: 92 XXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSP--GFKWHLSNVQTWC 149
V DCL+ + DSV L A EL R G WH++N+QTW
Sbjct: 93 NLETTLRPQYYASVHDCLDQIRDSVNQLSLAIAELDRVSRRQGKSQGDLHWHINNLQTWT 152
Query: 150 SAALTDENTCLDGLSRGVDAATRSAIRGKIVEVAQVTSNALALV 193
S ALTD TC+ + ++ I+GK+ V + TSNALA +
Sbjct: 153 STALTDAETCVSQFPGRRMSKLKATIKGKVKNVEETTSNALAFI 196
>AT4G25250.1 | chr4:12934632-12935231 FORWARD LENGTH=200
Length = 199
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
+++ +C +T YP +C +L +L+++V A++A+ V ++
Sbjct: 37 YVKTACNSTTYPTMCYNCLSSYSSTIKSDPI---KLCTTSLNLNVKSAKNATLVVSNLLQ 93
Query: 92 XXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCSA 151
++DC++ M D++ L+ A E+ R G + HL NV+TW S+
Sbjct: 94 KAKAAKSHEVSI-LKDCVDEMKDTIDELKQAVAEM--KYVRGGGKTTEEHLKNVKTWVSS 150
Query: 152 ALTDENTCLDGLSRG-VDAATRSAIRGKIVEVAQVTSNALALV 193
ALTDE TC DG G V+ T+ ++ I E+++ TSN LAL+
Sbjct: 151 ALTDEGTCTDGFEEGRVNVETKKKVKKAISELSKTTSNTLALL 193
>AT5G51520.1 | chr5:20925980-20926594 FORWARD LENGTH=205
Length = 204
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 13/172 (7%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
F++ +C +T YP C + +L AL+++V A+ A++ V +
Sbjct: 37 FVKTACNSTTYPDKCYKSLSSYSSNIKSDPI---KLCTTALNLNVKSAKEATSVVSKLLK 93
Query: 92 XXXXXX------XXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNV 145
++DCLE M D++ L+ A E+ N+ GS H++NV
Sbjct: 94 MSQKSTAGRKGKMLPEALILKDCLEEMKDTIIELKQAITEMK-NLQDGGSMA--EHITNV 150
Query: 146 QTWCSAALTDENTCLDGLSR-GVDAATRSAIRGKIVEVAQVTSNALALVNRV 196
+TW S+ALTDE TC DG V+ T+ + + E+A TSN LAL+ +
Sbjct: 151 RTWVSSALTDEGTCTDGFEEVKVNKETKKKVNKVVEELATTTSNTLALITNL 202
>AT3G62820.1 | chr3:23229782-23230366 FORWARD LENGTH=195
Length = 194
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
+++ +C T+Y +C + + ARA +SV++ + + H+
Sbjct: 33 YVQNACSVTRYQDLCAKTLLPFASVAKNSPS---KWARAGVSVAITDNKDV---LRHLLK 86
Query: 92 XXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCSA 151
+ DC E + DS+ L + L RA F+ +S++ TW S+
Sbjct: 87 TRLSTIGKRDRIALSDCRELLQDSLDSLHKSLAVL--RTLRASE--FQQQMSDLATWLSS 142
Query: 152 ALTDENTCLDGLSRGVDAATRSA-----IRGKIVEVAQVTSNALALVNRVA 197
+LTD++TCLDG + +TRS+ IR ++ ++SN+LAL+N++A
Sbjct: 143 SLTDKDTCLDGFEK---TSTRSSSTVRMIRKRVTTSMYLSSNSLALLNKLA 190
>AT2G47670.1 | chr2:19544131-19544757 REVERSE LENGTH=209
Length = 208
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 32 FIRKSCRATQYPAVCVQXXXXXXXXXXXXXXXXRELARAALSVSVDKARSASTYVGHICX 91
++R +C T+Y +CV+ + ARA+++V++ + + +
Sbjct: 48 YVRNACNVTRYNRLCVRTLWPFAIVARNNTS---KWARASVAVTITDTKRV---LRLLLK 101
Query: 92 XXXXXXXXXXXXXVRDCLENMADSVGHLRDAAQELGGNMGRAGSPGFKWHLSNVQTWCSA 151
+ DC E DS+ +L + L + F+ +S++ TW SA
Sbjct: 102 TQRSAVGESERIALSDCRELFVDSLDNLYKSLAVLRT----LNADEFQRQISDLATWLSA 157
Query: 152 ALTDENTCLDGLSR-GVDAATRSAIRGKIVEVAQVTSNALALVNRVA 197
ALTD++TCLDG T +R K + ++ SNALAL+ ++A
Sbjct: 158 ALTDDDTCLDGFEETSSRTRTVRMVRRKATKCMRLCSNALALLKKLA 204
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.129 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,540,350
Number of extensions: 75969
Number of successful extensions: 264
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 235
Number of HSP's successfully gapped: 18
Length of query: 200
Length of database: 11,106,569
Length adjustment: 94
Effective length of query: 106
Effective length of database: 8,529,465
Effective search space: 904123290
Effective search space used: 904123290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 109 (46.6 bits)