BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0693700 Os06g0693700|AK065874
(316 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309 233 7e-62
AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355 164 4e-41
AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266 160 7e-40
AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275 157 5e-39
AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335 152 2e-37
AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260 114 1e-25
AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256 105 3e-23
AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373 89 2e-18
AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222 77 8e-15
>AT4G31410.1 | chr4:15244259-15245474 FORWARD LENGTH=309
Length = 308
Score = 233 bits (595), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 166/294 (56%), Gaps = 15/294 (5%)
Query: 20 DIQLDKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERFKGAYEL 79
+ QL +W +D+TCPICLD+PHN VLL+C+SY GCR FVC+TD SNCL+RF A
Sbjct: 22 EFQLTLNW-DDLTCPICLDFPHNGVLLQCSSYGNGCRAFVCNTDHLHSNCLDRFISA--- 77
Query: 80 PANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEED 139
T + D + +P CPLCRG+V GW+V+ EARL L++KKRCCEE+
Sbjct: 78 -----CGTESPPAPDEPRSKVLEESCKPVCPLCRGEVTGWLVVEEARLRLDEKKRCCEEE 132
Query: 140 CCSFVGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIV 199
C F+G + EL+KH Q +HPDSRPSEIDPAR++DWENFQQSS+I+DVLSTIH++VP G+V
Sbjct: 133 RCRFMGTYLELRKHAQSEHPDSRPSEIDPARKLDWENFQQSSEIIDVLSTIHSEVPRGVV 192
Query: 200 LGDYVIXXXXXXXXXXXXVFRRVRRHWWSFMXXXXXXXXXXXXXXXXXXXXXXXXXXNSN 259
LGDYVI +WW+ +
Sbjct: 193 LGDYVIEYGDDDTGDEFEDVPNNEGNWWTSCILYQMFDNIRNARNRRRSRMSESRRGSRR 252
Query: 260 QAHLESFNLEVPTQSVDLREIRFDEIDDEYIVTGAIPSIATPGRMASFHYRDTR 313
++ S + + S++ E R DEIDDE+I T R +S H R
Sbjct: 253 SSYENSNSDDSSVASIEFPEYRVDEIDDEFISTSGA------NRSSSMHQSSRR 300
>AT3G24740.1 | chr3:9032397-9033461 FORWARD LENGTH=355
Length = 354
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 122/236 (51%), Gaps = 38/236 (16%)
Query: 8 MKKVVRPSSFDFDIQLDKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRS 67
M V R S + D+ ++V+CP+C+D+PHNAVLL C+S++KGCR ++CDT S
Sbjct: 1 MAGVKRKLSTESDVHALHKELDEVSCPVCMDHPHNAVLLLCSSHDKGCRSYICDTSYRHS 60
Query: 68 NCLERFKGAYELPAN---------------MKVSTIAVAPLDSIHIVAPNVNN------- 105
NCL+RFK + AN + A S H + N +
Sbjct: 61 NCLDRFKKLHSESANDPTPEANLASREHNNESLYEHGTASRSSFHRESGNRGSSWDSESL 120
Query: 106 ----------------RPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSFVGNFNE 149
CPLCRG V+GW V+ E R +L+ K R C + CSF GN+ +
Sbjct: 121 RRRRRVEEEVESEDITNLKCPLCRGTVLGWKVVEEVRTYLDHKNRSCSRESCSFTGNYQD 180
Query: 150 LQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIVLGDYVI 205
L++H ++ HP +RPS+ DP+R+ W + + D++S I + +P +V+GDYVI
Sbjct: 181 LRRHARRTHPTTRPSDTDPSRERAWRRLENQREYGDIVSAIRSAMPGAVVVGDYVI 236
>AT1G77770.1 | chr1:29246380-29247275 REVERSE LENGTH=266
Length = 265
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 110/182 (60%), Gaps = 21/182 (11%)
Query: 24 DKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERFKGAYELPANM 83
K W TCP+CL+ PHNAVLL C+SY KGCRP++C T +NCL++++ +Y +
Sbjct: 23 KKEWAGS-TCPVCLESPHNAVLLLCSSYHKGCRPYMCATSSRFANCLDQYRKSYGNENSG 81
Query: 84 KVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSF 143
+ + CPLCRG V GW V+ +AR+H N K+R C +D CSF
Sbjct: 82 QPELL--------------------CPLCRGQVKGWTVVKDARMHFNSKRRTCMQDNCSF 121
Query: 144 VGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIVLGDY 203
+GNF +L+KH ++KHP + P IDPA + W+ ++ D DV+STI + P +VLGDY
Sbjct: 122 LGNFRKLKKHMKEKHPHACPRAIDPALETKWKRLERERDRRDVISTIMSSTPGAVVLGDY 181
Query: 204 VI 205
VI
Sbjct: 182 VI 183
>AT4G08460.1 | chr4:5377378-5378202 REVERSE LENGTH=275
Length = 274
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 105/181 (58%), Gaps = 19/181 (10%)
Query: 25 KSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERFKGAYELPANMK 84
K WT VTCP+CL+ PHN+V+L C+SY KGCRP++C T SNCLE++K AY
Sbjct: 42 KPWT-GVTCPVCLEVPHNSVVLLCSSYHKGCRPYMCATGNRFSNCLEQYKKAYA------ 94
Query: 85 VSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSFV 144
D P + CPLCRG V GW V+ + R +LN KKR C D C F
Sbjct: 95 --------KDEKSDKPPEL----LCPLCRGQVKGWTVVEKERKYLNSKKRSCMNDECLFY 142
Query: 145 GNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIVLGDYV 204
G++ +L+KH ++ HP ++P IDP + W+ + + DV+ST+ + P +V GDYV
Sbjct: 143 GSYRQLKKHVKENHPRAKPRAIDPVLEAKWKKLEVERERSDVISTVMSSTPGAMVFGDYV 202
Query: 205 I 205
I
Sbjct: 203 I 203
>AT1G68140.1 | chr1:25539410-25540414 REVERSE LENGTH=335
Length = 334
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 115/199 (57%), Gaps = 13/199 (6%)
Query: 9 KKVVRPSSFDFDIQ--LDKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTR 66
K++V + F D L+K E+V C +C++ PHNAVLL C+S++KGCRP++C T
Sbjct: 29 KRLVARNMFAEDCSKCLEKRDWENVICSVCMECPHNAVLLLCSSHDKGCRPYMCGTSFRY 88
Query: 67 SNCLERFKGAYELPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEAR 126
SNCL+++K A I + L ++ +CPLCRG V GW ++ AR
Sbjct: 89 SNCLDQYKKASAKLKTSGHQQINKSELGNL-----------TCPLCRGQVKGWTIVQPAR 137
Query: 127 LHLNQKKRCCEEDCCSFVGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDV 186
LN KKR C ++ C + G F EL+KH + HP ++P E+DP + +W + D DV
Sbjct: 138 DFLNLKKRICMQENCVYAGTFKELRKHMKVDHPSAKPREVDPDVEQNWRRLEIEHDRDDV 197
Query: 187 LSTIHAQVPNGIVLGDYVI 205
+STI + +P +V GDYVI
Sbjct: 198 MSTIRSTMPGTVVYGDYVI 216
>AT1G15430.1 | chr1:5305011-5305790 FORWARD LENGTH=260
Length = 259
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 21/181 (11%)
Query: 9 KKVVRPSSFDFDIQLDKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSN 68
+K V SS +++ W EDV C IC++ PHNAVLL+C+S+ KGCR ++CDT SN
Sbjct: 30 QKEVEASSSPVELESVSEW-EDVRCVICMEPPHNAVLLQCSSFSKGCRAYMCDTSARHSN 88
Query: 69 CLERFKGAYELPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLH 128
C ++++ + ++ + ++H CP CRG+V G + AR
Sbjct: 89 CFKQYR---------RSNSSSRCSGKTLH-----------CPYCRGEVQGTMKSTCARRF 128
Query: 129 LNQKKRCCEEDCCSFVGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLS 188
+N + RCC D C F G + +L+ H + +HP P ++DP Q WE ++ ++ +++L+
Sbjct: 129 MNARPRCCTVDKCDFSGTYAQLKNHLKTEHPGFTPPKLDPWEQHMWEQLEREAEYIEMLN 188
Query: 189 T 189
Sbjct: 189 A 189
>AT1G80220.1 | chr1:30167839-30168606 FORWARD LENGTH=256
Length = 255
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 32/185 (17%)
Query: 23 LDKSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERF-KGAYELPA 81
+D+S EDV C IC++ PH AVLL C+S GCRP++C T SNC ++F + + +
Sbjct: 37 IDESNWEDVRCMICMEPPHEAVLLTCSSSLNGCRPYMCGTSFRHSNCFKQFCRNNRKKRS 96
Query: 82 NMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGE-ARLHLNQKKRCCEEDC 140
N K ++H CPLCRG+V+ + AR +N K R C D
Sbjct: 97 NTK----------TLH-----------CPLCRGEVLETKKASKTARRFMNAKPRSCPVDG 135
Query: 141 CSFVGNFNELQKHTQQKHPDSRPSEIDPARQVDWENFQQSSDIVDVLST---------IH 191
C F G + L KH + +H P+++DP RQ WE + ++ V+++S +H
Sbjct: 136 CEFSGTYAHLNKHLKTEHQGLVPAKVDPQRQSRWEMLVRHAEYVNLMSAAGIPHMSGVVH 195
Query: 192 AQVPN 196
Q+PN
Sbjct: 196 HQLPN 200
>AT3G25910.1 | chr3:9489836-9490954 FORWARD LENGTH=373
Length = 372
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 104 NNRP---SCPLCRGDVIGWIVIGEARLHLNQKKRCCEEDCCSFVGNFNELQKHTQQKHPD 160
N+P +CPLCRG + W+V+ AR +N K R C + C F G++++L+KH + HP
Sbjct: 168 KNKPQKLTCPLCRGHIKEWVVVKAARCFMNSKHRSCSCETCDFSGSYSDLRKHARLLHPG 227
Query: 161 SRPSEIDPARQVDWENFQQSSDIVDVLSTIHAQVPNGIVLGD 202
RPSE DP RQ W ++ SD+ D+LST+ + + D
Sbjct: 228 VRPSEADPERQRSWRRLERQSDLGDLLSTLQSSFGGDEISND 269
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 25 KSWTEDVTCPICLDYPHNAVLLRCTSYEKGCRPFVCDTDQTRSNCLERFKGA 76
K W E+ CP+C+++PHN +LL C+SYE GCRP++CDT SNC ++F+ A
Sbjct: 36 KEW-EEARCPVCMEHPHNGILLICSSYENGCRPYMCDTSHRHSNCFDQFRKA 86
>AT2G26050.1 | chr2:11098652-11099380 REVERSE LENGTH=222
Length = 221
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 53 KGCRPFVCDTDQTRSNCLERFKGAYELPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLC 112
+GC P++CDT SNC ++F+ K + P ++H CPLC
Sbjct: 38 RGCHPYMCDTSVRHSNCFKQFR--------RKTIKKRLYP-KTLH-----------CPLC 77
Query: 113 RGDVIGWI-VIGEARLHLNQKKRCCEEDCCSFVGNFNELQKHTQQKHPDSRPSEIDPARQ 171
RG+V V AR +N K R C + C F G F++L KH + +H P ++DP RQ
Sbjct: 78 RGEVSETTKVTSTARRFMNAKPRSCSVEDCKFSGTFSQLTKHLKTEHRGIVPPKVDPLRQ 137
Query: 172 VDWENFQQSSDIVDVLS 188
WE ++ S+ V++++
Sbjct: 138 QRWEMMERHSEYVELMT 154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.137 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,543,515
Number of extensions: 264341
Number of successful extensions: 594
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 586
Number of HSP's successfully gapped: 11
Length of query: 316
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 217
Effective length of database: 8,392,385
Effective search space: 1821147545
Effective search space used: 1821147545
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)