BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0683000 Os06g0683000|AK120010
(465 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G27240.1 | chr4:13640160-13641640 FORWARD LENGTH=432 362 e-100
AT5G54630.1 | chr5:22192607-22194260 REVERSE LENGTH=473 322 3e-88
AT1G11490.1 | chr1:3868884-3870065 REVERSE LENGTH=366 214 7e-56
AT1G75710.1 | chr1:28428806-28431128 FORWARD LENGTH=463 194 6e-50
AT2G29660.1 | chr2:12679346-12680467 FORWARD LENGTH=374 162 4e-40
AT1G62520.1 | chr1:23144506-23145348 FORWARD LENGTH=281 111 9e-25
AT4G22560.1 | chr4:11880178-11880972 FORWARD LENGTH=265 105 7e-23
AT4G12450.1 | chr4:7385841-7386674 REVERSE LENGTH=278 94 1e-19
>AT4G27240.1 | chr4:13640160-13641640 FORWARD LENGTH=432
Length = 431
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/431 (46%), Positives = 267/431 (61%), Gaps = 31/431 (7%)
Query: 37 MPTVWAALKKSLNCKSGDSCGVIEREESQ-GGVXXXXXXXXXXXXXXXXXXCSRSIANLR 95
+P+VW +LKKSL CKS S I R + + + CSRSIANL+
Sbjct: 30 LPSVWFSLKKSLPCKSDVSDVHIPRSKKELAPISTKRTTTSSGGGVGGRSGCSRSIANLK 89
Query: 96 DVFHSQYGGSRRQEDXXXXXXXXXXXXXXXSPRSIGSNDVLNPVTHDVLLAARSDAKCEL 155
DV H G R E SPRSIGS++ LNP+THDV+ S++ CEL
Sbjct: 90 DVIH---GNQRHLEKPLCS-----------SPRSIGSSEFLNPITHDVIF---SNSTCEL 132
Query: 156 RISTPXXXXXXXXXXXVPFPHSPLLLRCSTTPVSTRKSPSAMSPLRRXXXXXXXXXXXXX 215
+I+ P +P+ S ++RK A S R
Sbjct: 133 KITAAGATEFVGNLR----PGTPVNYSSSRRSQTSRK---ASSLDREGLGFHQSRRENDR 185
Query: 216 XXXXXXCEVGIRCHRCGDRFANHDALESHHHSRHAVTELVEGDSSRKVVEIICKAGWAKT 275
+ CH+CG++F+ +A E+HH ++HAVTEL+EGDSSR++VEIIC+ W KT
Sbjct: 186 EAAINGDNSSVSCHKCGEKFSKLEAAEAHHLTKHAVTELMEGDSSRRIVEIICRTSWLKT 245
Query: 276 ENALGRIERVVKVHNAERSVARFEEFREAVKGKAARLSKKHPRCLADGNELLRFHATTLA 335
EN GRI+R++KVHN ++++ARFEE+R+ VK +A++L KKHPRC+ADGNELLRFH TT+A
Sbjct: 246 ENQGGRIDRILKVHNMQKTLARFEEYRDTVKIRASKLQKKHPRCIADGNELLRFHGTTVA 305
Query: 336 CSLGAGDSSTLCTSGSCSVCRIIRHGFSATREIKDGVGVFTTSTSKRALECIXXXXXXXX 395
C+LG S++LC+S C VCRIIR+GFSA RE+ +G+GVFT STS+RA E I
Sbjct: 306 CALGINGSTSLCSSEKCCVCRIIRNGFSAKREMNNGIGVFTASTSERAFESI-----VIG 360
Query: 396 XXXXXVRKALLVCRVVAGRIHRPLENLQEVAA-QPGFDSVAGKVGAYASIEELYLLNPRA 454
RKAL+VCRV+AGR+HRP+EN++E+ GFDS+AGKVG Y ++EELYLLN RA
Sbjct: 361 DGGGGDRKALIVCRVIAGRVHRPVENVEEMGGLLSGFDSLAGKVGLYTNVEELYLLNSRA 420
Query: 455 LLPCFVVICKP 465
LLPCFV+ICKP
Sbjct: 421 LLPCFVLICKP 431
>AT5G54630.1 | chr5:22192607-22194260 REVERSE LENGTH=473
Length = 472
Score = 322 bits (825), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 151/242 (62%), Positives = 190/242 (78%), Gaps = 2/242 (0%)
Query: 226 IRCHRCGDRFANHDALESHHHSRHAVTELVEGDSSRKVVEIICKAGWAKTENALGRIERV 285
+ CH+CG++F +A E+HH S+HAVTELVEGDSSRK+VEIIC+ W K+EN GRI+RV
Sbjct: 231 VSCHKCGEQFNKLEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIDRV 290
Query: 286 VKVHNAERSVARFEEFREAVKGKAARLSKKHPRCLADGNELLRFHATTLACSLGAGDSST 345
+KVHN ++++ARFEE+RE VK +A++L KKHPRCLADGNELLRFH TT+AC LG S++
Sbjct: 291 LKVHNMQKTLARFEEYRETVKIRASKLQKKHPRCLADGNELLRFHGTTVACGLGINGSTS 350
Query: 346 LCTSGSCSVCRIIRHGFSATREIKDGVGVFTTSTSKRALECIXXXXXXXXXXXX-XVRKA 404
+CT+ C VCRIIR+GFS+ RE +GVGVFT STS RA E I VRK
Sbjct: 351 VCTAEKCCVCRIIRNGFSSKREKNNGVGVFTASTSGRAFESILVNGGDESGDVDRTVRKV 410
Query: 405 LLVCRVVAGRIHRPLENLQEVAA-QPGFDSVAGKVGAYASIEELYLLNPRALLPCFVVIC 463
L+VCRV+AGR+HRP+EN++E+ GFDS+AGKVG Y ++EELYLLNP+ALLPCFVVIC
Sbjct: 411 LIVCRVIAGRVHRPVENVEEMNGLMSGFDSLAGKVGLYTNVEELYLLNPKALLPCFVVIC 470
Query: 464 KP 465
KP
Sbjct: 471 KP 472
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 26/131 (19%)
Query: 37 MPTVWAALKKSLNCKSG-----DSCGVIEREESQGGVXXXXXXXXXXXXXXX----XXXC 87
+PTVW +LKKSL+CKS D ++++ + C
Sbjct: 20 IPTVWFSLKKSLHCKSEPSDVHDPISTTKQQQHLSTISTKKISGISSGGAAVCGGGLSGC 79
Query: 88 SRSIANLRDVFHSQYGGSRRQEDXXXXXXXXXXXXXXXSPRSIGSNDVLNPVTHDVLLAA 147
SRSIANL+DV H GS+R + SPRSIGSN+ LNP+TH+V+L
Sbjct: 80 SRSIANLKDVIH----GSKRHFE----------KPPISSPRSIGSNEFLNPITHEVIL-- 123
Query: 148 RSDAKCELRIS 158
S++ CEL+I+
Sbjct: 124 -SNSTCELKIT 133
>AT1G11490.1 | chr1:3868884-3870065 REVERSE LENGTH=366
Length = 365
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 156/249 (62%), Gaps = 10/249 (4%)
Query: 222 CEVGI-RCHRCGDRFANHDALESHHHSRHAVTELVEGDSSRKVVEIICKAGWAKTENAL- 279
C G+ C +C +R + DA E+H+ S H+V L+ GD SR VE+IC G++ +
Sbjct: 122 CGFGVLACQKCHERVRDLDAFEAHYLSNHSVVRLLAGDFSRTTVELICNTGYSHKLGKMK 181
Query: 280 -GRIERVVKVHNAERSVARFEEFREAVKGKAARLSKKHPRCLADGNELLRFHATTLACSL 338
I + K+ N +R VA FE++RE VK +A +LSKKH RC+ADGNE L FH TTL+C+L
Sbjct: 182 GNNISAIFKIQNLQRVVADFEDYRELVKIRANKLSKKHSRCMADGNEFLGFHGTTLSCTL 241
Query: 339 GAGDSST-LCTSGSCSVCRIIRHGFSATREIKDGV-GVFTTSTSKRALECIXXXXXXXXX 396
G +SS+ LC S C VC I+RHGFS + DG+ GV T STS ALE I
Sbjct: 242 GFSNSSSNLCFSDHCEVCHILRHGFSP-KTRPDGIKGVLTASTSSTALESIETDQGRNRG 300
Query: 397 XXXXVRKALLVCRVVAGRIHRPLENLQEVAAQPGFDSVAGKVGAYASIEELYLLNPRALL 456
A+++CRV+AGR+H+P++ + FDS+A KVG + IEELYLL+ +ALL
Sbjct: 301 SLI----AVVLCRVIAGRVHKPMQTFENSLGFSEFDSLALKVGQNSRIEELYLLSTKALL 356
Query: 457 PCFVVICKP 465
PCFV+I KP
Sbjct: 357 PCFVIIFKP 365
>AT1G75710.1 | chr1:28428806-28431128 FORWARD LENGTH=463
Length = 462
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 154/261 (59%), Gaps = 32/261 (12%)
Query: 228 CHRCGDRFANHDALESHHHSRHAVTELVEGDSSRKVVEIICKAGWAKTENALGRIERVVK 287
C +CG+ F ++LE H RHAV+EL DS R +VEII K+ W K ++ + +IER++K
Sbjct: 206 CSQCGEVFPKLESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDSPICQIERILK 265
Query: 288 VHNAERSVARFEEFREAVKGKAARLSKKHPRCLADGNELLRFHATTLACSLGAGDSSTLC 347
VHN +R++ RFE+ R+AVK +A + ++K RC ADGNELLRFH TTL CSLGA SS+LC
Sbjct: 266 VHNTQRTIQRFEDCRDAVKARALQATRKDARCAADGNELLRFHCTTLTCSLGARGSSSLC 325
Query: 348 TS-GSCSVCRIIRHGFSATREIKDG----VGVFTTSTSKRALECIXXXXXXXXXXXXXVR 402
++ C VC +IRHGF GV TT++S RA + + R
Sbjct: 326 SNLPVCGVCTVIRHGFQGKSGGGGANVANAGVRTTASSGRADDLL--------RCSDDAR 377
Query: 403 KALLVCRVVAGRIHR---PLENLQEVAAQPG----------------FDSVAGKVGAYAS 443
+ +LVCRV+AGR+ R P + A + FDSVA G Y++
Sbjct: 378 RVMLVCRVIAGRVKRVDLPAADASATAEKKSTVEDNSVVGVSSSGGTFDSVAVNAGVYSN 437
Query: 444 IEELYLLNPRALLPCFVVICK 464
+EEL + NPRA+LPCFVVI K
Sbjct: 438 LEELVVYNPRAILPCFVVIYK 458
>AT2G29660.1 | chr2:12679346-12680467 FORWARD LENGTH=374
Length = 373
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 141/249 (56%), Gaps = 20/249 (8%)
Query: 228 CHRCGDRFANHDALESHHHSRHAVTELVEGDSSRKVVEIICKAGWAKTENALGR-IERVV 286
C+ CG+ F + LE+H +HAV+EL+ G+SS +V+II K+GW + N I R++
Sbjct: 128 CNSCGEIFPKINLLENHIAIKHAVSELIAGESSTNIVKIIFKSGWPEQGNYKSPVINRIL 187
Query: 287 KVHNAERSVARFEEFREAVKGKAARLSK-----KHPRCLADGNELLRFHATTLACSLGAG 341
K+HN+ + + RFEE+RE VK KAAR + RC+ADGNELLRF+ +T C LG
Sbjct: 188 KIHNSSKILTRFEEYREFVKAKAARSNGGGRRWDDERCVADGNELLRFYCSTFMCDLGQN 247
Query: 342 DSSTLCTSGSCSVCRIIRHGFSATREIKDGVGVFTTSTSKRALECIXXXXXXXXXXXXXV 401
S LC CS+C II GFS + G+ T +T R V
Sbjct: 248 GKSNLCGHQYCSICGIIGSGFSPKLD-----GIATLATGWRG-HVAVPEEVEEEFGFMNV 301
Query: 402 RKALLVCRVVAGRI--HRPLENLQEVAAQPGFDSVAG----KVGAYASI--EELYLLNPR 453
++A+LVCRVVAGR+ ++ + + G+DS+ G K GA I +EL + NPR
Sbjct: 302 KRAMLVCRVVAGRVGCDLIDDDDVDKSDGGGYDSLVGQSGNKSGALLRIDDDELLVFNPR 361
Query: 454 ALLPCFVVI 462
A+LPCFV++
Sbjct: 362 AVLPCFVIV 370
>AT1G62520.1 | chr1:23144506-23145348 FORWARD LENGTH=281
Length = 280
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 108/215 (50%), Gaps = 36/215 (16%)
Query: 251 VTELVEGDSSRKVVEIICKAGWAKTENALGRIERVVKVHNAERSVARFEEFREAVKGKA- 309
+TEL EG SR VVEII + W + GR+E + KV N +++ RFEE+REAVK ++
Sbjct: 100 LTELSEGHQSRNVVEIIFQTSWGPKPFS-GRVEMIFKVQNGSKTLTRFEEYREAVKARSV 158
Query: 310 ARLSKKHPRCLADGNELLRFHATTLACSLGAGDSSTLCTSGSCSVCRIIRHGFSATREIK 369
+ +++ R +ADGNE +RF+ L S G G S+ G I S+T K
Sbjct: 159 GKAREENARSVADGNETMRFYC--LGPSYGGGGSAWGILGGKGGGASIYTFAGSSTANEK 216
Query: 370 DGVGVFTTSTSKRALECIXXXXXXXXXXXXXVRKALLVCRVVAGRIHRPLENLQEVAAQP 429
G G RKA+LVCRV+AGR+ + E + +
Sbjct: 217 AGGG--------------------------KGRKAMLVCRVIAGRVTKQNELKYDSDLRS 250
Query: 430 GFDSVAGKVGAYASIEELYLLNPRALLPCFVVICK 464
FDSV+G G EL + + RA+LPCF++I +
Sbjct: 251 RFDSVSGDDG------ELLVFDTRAVLPCFLIIYR 279
>AT4G22560.1 | chr4:11880178-11880972 FORWARD LENGTH=265
Length = 264
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 107/224 (47%), Gaps = 61/224 (27%)
Query: 250 AVTELVEGDSSRKVVEIICKAGWAKTENALGRIERVVKVHNAERSVARFEEFREAVKGKA 309
A+TEL +G SR VVEII + W+ E GRIE + KV + R+V RFEE+RE VK +A
Sbjct: 92 ALTELPDGHPSRNVVEIIFHSSWSSDEFP-GRIEMIFKVEHGSRTVTRFEEYREVVKSRA 150
Query: 310 ----ARLSKKHPRCLADGNELLRFHA-----TTLACSLGAGDSSTLCTSGSCSVCRIIRH 360
++ RCLADGNE++RF+ AC G +CT
Sbjct: 151 GFNGGTCEEEDARCLADGNEMMRFYPVLDGFNGGACVFAGGKGQAVCT------------ 198
Query: 361 GFSATREIKDGVGVFTTSTSKRALECIXXXXXXXXXXXXXVRKALLVCRVVAGRIHRPLE 420
FS + E + +S RKA+++CRV+AGR+
Sbjct: 199 -FSGSGE------AYVSSGGGGG------------------RKAMMICRVIAGRV----- 228
Query: 421 NLQEVAAQPGFDSVAGKVGAYASIEELYLLNPRALLPCFVVICK 464
+ G DSVAG+ G EL++ + RA+LPCF++I +
Sbjct: 229 ---DDVIGFGSDSVAGRDG------ELFVFDTRAVLPCFLIIFR 263
>AT4G12450.1 | chr4:7385841-7386674 REVERSE LENGTH=278
Length = 277
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 109/254 (42%), Gaps = 83/254 (32%)
Query: 242 ESHHHSRHAV-------------TELVEGDSSRKVVEIICKAGWAKTENALGRIERVVKV 288
SHH +R +V T+L +G SR VVEII ++ W+ E GR+E + KV
Sbjct: 75 NSHHPTRRSVSARASSESVLPVLTDLPDGHPSRNVVEIIFQSSWSSDEFP-GRVEMIFKV 133
Query: 289 HNAERSVARFEEFREAVKGKA----------ARLSKKHPRCLADGNELLRFH-------- 330
N ++V RFEE+REAVK ++ ++ RC ADGNE++RF
Sbjct: 134 ENGSKAVTRFEEYREAVKSRSCSKVDSDRVDGSACDENARCSADGNEMMRFFPLGPIPGG 193
Query: 331 ATTLACSLGAGDSSTLCTSGSCSVCRIIRHGFSATREIKDGVGVFTTSTSKRALECIXXX 390
A G + +CT FS + E G
Sbjct: 194 INGGAWGFPGGKGAAVCT-------------FSGSGEAHASTG----------------- 223
Query: 391 XXXXXXXXXXVRKALLVCRVVAGRIHRPLENLQEVAAQPGFDSVAGKVGAYASIEELYLL 450
R+A+L+CRV+AGR+ + + G DSVAG+ G EL +
Sbjct: 224 -------GGGGRRAMLICRVIAGRVAK--------KGEFGSDSVAGRAG------ELIVF 262
Query: 451 NPRALLPCFVVICK 464
+ RA+LPCF++ +
Sbjct: 263 DARAVLPCFLIFFR 276
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,812,823
Number of extensions: 253646
Number of successful extensions: 536
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 511
Number of HSP's successfully gapped: 10
Length of query: 465
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 363
Effective length of database: 8,310,137
Effective search space: 3016579731
Effective search space used: 3016579731
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)