BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0677400 Os06g0677400|AK064044
(342 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348 432 e-122
AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359 129 2e-30
AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335 110 9e-25
AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290 106 2e-23
AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394 97 9e-21
AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300 81 1e-15
AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319 75 6e-14
>AT4G20930.1 | chr4:11198627-11201036 REVERSE LENGTH=348
Length = 347
Score = 432 bits (1112), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/307 (67%), Positives = 246/307 (80%)
Query: 35 VGFIGLGNMGAHMARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVIT 94
VGFIGLGNMG M NL+ AGYKVTVHD+N + MK F++ G+ ++ +P EV++ S+VVIT
Sbjct: 40 VGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVIT 99
Query: 95 MLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYA 154
MLPSS+HV+DVY G NGLL + P L+IDSST+DPQT+RKIS+ +S C LKEK+
Sbjct: 100 MLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNW 159
Query: 155 EKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAK 214
EKP+MLDAPVSGGV AAEAG LTFMVGG E+AYLAA+P+L SMG+ +IYCGG+GNGS AK
Sbjct: 160 EKPVMLDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAK 219
Query: 215 ICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVPS 274
ICNN+AMA+SMLG SEA ALGQ+LGI AS LT++ N SS RCWSSD YNPVPGVM VPS
Sbjct: 220 ICNNLAMAVSMLGTSEALALGQSLGISASTLTEVLNTSSGRCWSSDAYNPVPGVMKGVPS 279
Query: 275 SRNYDGGFTSKLMTKDLDLAMASASGVGFNCPFGSQALEIYRKLCADGCELKDFSCAFRH 334
SR+Y+GGF SKLM KDL+LA ASA VG P S+A EIY+K+C +G E KDFSC FRH
Sbjct: 280 SRDYNGGFASKLMAKDLNLAAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCVFRH 339
Query: 335 NYAGKDE 341
Y GKDE
Sbjct: 340 FYNGKDE 346
>AT1G17650.1 | chr1:6069594-6071964 REVERSE LENGTH=359
Length = 358
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 153/341 (44%), Gaps = 30/341 (8%)
Query: 4 VGWRVRSMVQHLGWNCRRGLSSAAVQSQLENVGFIGLGNMGAHMARNLVMAGYKVTVHDV 63
+ +RV S +Q + R L + ++GF+G+G MG+ MA+NL+ AG VTV +
Sbjct: 45 LAYRVYSSLQSTTPSTRDELGTV-------SIGFLGMGIMGSPMAQNLIKAGCDVTVWNR 97
Query: 64 NENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVYNGRNGLLANGGCLGPWL 123
++ G K SP EV+ + D+ ML +DV G+NG A G
Sbjct: 98 TKSKCDPLVGLGAKYKSSPEEVTATCDLTFAMLADPESAIDVACGKNG--AIFGISSGKG 155
Query: 124 YIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGS 183
Y+D STVD +S IS I K+ A + L+APVSG AE G+L F+ G
Sbjct: 156 YVDVSTVDVASSILISKQI-----KDTGA-----LFLEAPVSGSKKPAEDGQLIFLTAGD 205
Query: 184 EEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKAS 243
+ Y A P L MGK Y G GNG+ K+ NM M M +E L Q +G+ +
Sbjct: 206 KPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMASFAEGILLSQKVGLDPN 265
Query: 244 VLTDIFNCSSARCWSSDTYNPVPGVMMDVPS--SRNYDGGFTSKLMTKDLDLAMASASGV 301
VL ++ + + P + PS Y F K KD+ LA+ A V
Sbjct: 266 VLVEVVSQGAINA---------PMYSLKGPSMIKSVYPTAFPLKHQQKDMRLALGLAESV 316
Query: 302 GFNCPFGSQALEIYRKLCADGCELKDFSCAFRHNYAGKDEN 342
+ P + A E+Y+ + G +DFS A K
Sbjct: 317 SQSTPIAAAANELYKVAKSYGLSDEDFSAVIEALKAAKSRE 357
>AT4G29120.1 | chr4:14350861-14351865 FORWARD LENGTH=335
Length = 334
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 142/315 (45%), Gaps = 32/315 (10%)
Query: 17 WNCRRGLSSAAVQSQL-----ENVGFIGLGNMGAHMARNLVMAGYKVTVHDVNENTMKKF 71
+ RR ++S+ + S + +G+IG G MG M +L+ AGY VTV + + +
Sbjct: 17 FFLRRSMASSTISSDIITPSNTKIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTL 76
Query: 72 SDDGIPTKLSPLEVSKSSDVVITML--PSSA-HV-LDVYNGRNGLLANGGCLGPWLYIDS 127
D G SP V++ SDVV T++ PS HV LD +G L GG L +D
Sbjct: 77 IDMGANVADSPNSVAEQSDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGGVL-----VDM 131
Query: 128 STVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAY 187
+T +P + +I+ K A + +DAPVSGG A+ GKL+ GG E
Sbjct: 132 TTSEPSLAEEIA----------KAASFKNCFSIDAPVSGGDLGAKNGKLSIFAGGDETTV 181
Query: 188 LAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKASVLTD 247
PL MGK + G +G G AK+ N + +A +MLG+ E G+ +
Sbjct: 182 KRLDPLFSLMGKVN-FMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKAGLDVKKFLE 240
Query: 248 IFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPF 307
+ +A S D Y D R++D GF KDL + + +G P
Sbjct: 241 AISTGAAGSKSIDLYG-------DRILKRDFDPGFYVNHFVKDLGICLNECQRMGLALPG 293
Query: 308 GSQALEIYRKLCADG 322
+ A ++Y L A G
Sbjct: 294 LALAQQLYLSLKAHG 308
>AT3G25530.1 | chr3:9271949-9273514 REVERSE LENGTH=290
Length = 289
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 130/300 (43%), Gaps = 19/300 (6%)
Query: 34 NVGFIGLGNMGAHMARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVI 93
VGF+GLG MG M+ NL+ G+KVTV + + + + G SP EV K I
Sbjct: 2 EVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTI 61
Query: 94 TMLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAY 153
ML L V + G+L C G YID STVD +TS KI+ I+
Sbjct: 62 AMLSDPCAALSVVFDKGGVLEQI-CEGKG-YIDMSTVDAETSLKINEAIT---------- 109
Query: 154 AEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVA 213
+ ++ PVSG AE G+L + G + + + P +GK++ Y G GNG+
Sbjct: 110 GKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKM 169
Query: 214 KICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVP 273
K+ NM M M SE L G+ + L DI + + NP+
Sbjct: 170 KLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGA-------MTNPMFKGKGPSM 222
Query: 274 SSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPFGSQALEIYRKLCADGCELKDFSCAFR 333
+ +Y F K KD+ LA+A + P + A E ++K + G DFS
Sbjct: 223 NKSSYPPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIE 282
>AT1G18270.3 | chr1:6283634-6293772 REVERSE LENGTH=1394
Length = 1393
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 34 NVGFIGLGNMGAHMARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVI 93
+GFIGLG MG MA +L+ + + V +DV + T+ +F + G SP EV+K DV++
Sbjct: 323 RIGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLV 382
Query: 94 TMLPSSAHVLDVYNGRNG---LLANGGCLGPWLYIDSSTVDP----QTSRKISMDISRCT 146
M+ + DV G G + +G + + +STV P Q R++ +
Sbjct: 383 IMVTNEVQAEDVLYGHLGAVEAIPSGATV-----VLASTVSPAFVSQLERRLENE----- 432
Query: 147 LKEKKAYAEKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKT-IYCG 205
+ ++DAPVSGGV A G+LT M G++EA +A +L ++ +K + G
Sbjct: 433 -------GKDLKLVDAPVSGGVKRAAMGELTIMASGTDEALKSAGLVLSALSEKLYVIKG 485
Query: 206 GAGNGSVAKICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPV 265
G G GS K+ N + + + +EA A G LG+ L ++ + S W + N V
Sbjct: 486 GCGAGSGVKMVNQLLAGVHIASAAEAMAFGARLGLNTRKLFNVISNSGGTSWMFE--NRV 543
Query: 266 PGVM 269
P ++
Sbjct: 544 PHML 547
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 35 VGFIGLGNMGAHMARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVIT 94
VGF+GL + +A +L+ +G+KV +++ ++KF + G SP +V K++ V+
Sbjct: 5 VGFVGLDSFSFELASSLLRSGFKVQAFEISTELVEKFIELGGHKCDSPADVGKAAAAVVV 64
Query: 95 MLPSSAHVLDVYNGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYA 154
+L + DV G G++ G + + SST+ +K+ L EK+
Sbjct: 65 VLSHPDQIQDVIFGDEGVMK--GLQKDAVLLLSSTISTLQLQKLEKQ-----LTEKR--- 114
Query: 155 EKPMMLDAPVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKT-IYCGGAGNGSVA 213
E+ ++DA V G+ GKL + G ++ A+P L +M + + G G GS
Sbjct: 115 EQIFVVDAYVLKGMSELLDGKLMIIASGRSDSITRAQPYLTAMCQNLYTFEGEIGAGSKV 174
Query: 214 KICNNMAMAISMLGVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVP 273
K+ N + I ++ EA +LG G+ +L DI + ++ W N +P ++ D
Sbjct: 175 KMVNELLEGIHLVAAVEAISLGSQAGVHPWILYDIISNAAGNSWIYK--NHIPLLLKDDI 232
Query: 274 SSRNYDGGFTSKLMTKDLDLAMASASGVGFNCPF 307
R D +++++L + A + F P
Sbjct: 233 EGRFLD------VLSQNLAIVEDKAKSLPFPVPL 260
>AT1G71170.1 | chr1:26830673-26831572 FORWARD LENGTH=300
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 13/194 (6%)
Query: 47 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 106
M +++ AGY VTV+ + K G T SP E+ + SDVV T++ +S V +
Sbjct: 28 MVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFTIVGNSNDVRSLL 87
Query: 107 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 166
G +G+L+ G + +D ++ P +R+I + R + +A +DAPVSG
Sbjct: 88 LGDDGVLS--GLKPGGVTVDMTSSKPGLAREIYAEARR-----RDCWA-----VDAPVSG 135
Query: 167 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 226
G A GKLT GG E P++ +MG + GGAG+G KI N + + +M+
Sbjct: 136 GDAGAREGKLTIFAGGDSEIVEWLAPVMKTMG-IVRFMGGAGSGQSCKIGNQICVGSNMI 194
Query: 227 GVSEAFALGQNLGI 240
G++E + G+
Sbjct: 195 GLAEGIVFAEKAGL 208
>AT1G71180.1 | chr1:26832335-26833291 FORWARD LENGTH=319
Length = 318
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 47 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 106
M +++ AGY VTV+ + K G SP E+++ SDVV T++ + V +
Sbjct: 49 MVSHIIAAGYSVTVYARDLRKTKDLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRSLL 108
Query: 107 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 166
G +G+L+ G + +D ++ P +R+I + R + +A +DAPVSG
Sbjct: 109 LGDDGVLS--GLTPGGVTVDMTSSKPGLAREIHAEARR-----RNCWA-----VDAPVSG 156
Query: 167 GVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAMAISML 226
G A G L GG E P++ ++G T Y G AG+G KI N +A A +++
Sbjct: 157 GDAGAREGTLGIFAGGDSEIVEWLSPVMKNIGTVT-YMGEAGSGQSCKIGNQIAGASNLV 215
Query: 227 GVSEAFALGQNLGI 240
G++E + G+
Sbjct: 216 GLAEGIVFAEKAGL 229
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,551,313
Number of extensions: 316478
Number of successful extensions: 822
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 806
Number of HSP's successfully gapped: 8
Length of query: 342
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 243
Effective length of database: 8,392,385
Effective search space: 2039349555
Effective search space used: 2039349555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)