BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0668200 Os06g0668200|AK070705
         (401 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79550.1  | chr1:29924347-29926295 REVERSE LENGTH=402          697   0.0  
AT1G56190.1  | chr1:21028403-21030454 FORWARD LENGTH=479          672   0.0  
AT3G12780.1  | chr3:4061127-4063140 REVERSE LENGTH=482            671   0.0  

>AT1G79550.1 | chr1:29924347-29926295 REVERSE LENGTH=402
          Length = 401

 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/401 (85%), Positives = 376/401 (93%)

Query: 1   MASKRSVGTLTESDLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAKVI 60
           MA+KRSVGTL E+DLKGK VF+R DLNVPLDD+  ITDDTRIRA+VPTIK+LMG G++V+
Sbjct: 1   MATKRSVGTLKEADLKGKSVFVRVDLNVPLDDNSNITDDTRIRAAVPTIKYLMGNGSRVV 60

Query: 61  LASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLEN 120
           L SHLGRPKGVTPKYSLKPLVPRLSELLGV+VVMAND IGEEVQKL A LP+GGVLLLEN
Sbjct: 61  LCSHLGRPKGVTPKYSLKPLVPRLSELLGVEVVMANDSIGEEVQKLVAGLPEGGVLLLEN 120

Query: 121 VRFYKEEEKNDPEFANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLMQKEL 180
           VRFY EEEKNDPEFA KLA++AD+YVNDAFGTAHRAHASTEGV K+L+PSVAGFLMQKEL
Sbjct: 121 VRFYAEEEKNDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKFLKPSVAGFLMQKEL 180

Query: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDILILGGGMIYTFYKAQGYAVGK 240
           DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLL  VDIL+LGGGMI+TFYKAQG +VG 
Sbjct: 181 DYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGS 240

Query: 241 SLVEEDKLELATSLIEKAKSKGVSLLLPTDIVVADKFAADAESKTVPASAIPDGWMGLDI 300
           SLVEEDKL+LA SL+EKAK+KGVSLLLPTD+V+ADKFA DA SK VPA+AIPDGWMGLDI
Sbjct: 241 SLVEEDKLDLAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDI 300

Query: 301 GPDSIKTFSETLDTTKTVIWNGPMGVFEFEKFAAGTDAIAKKLADITAKGVTTIIGGGDS 360
           GPDSIKTFSE LDTTKT+IWNGPMGVFEF+KFAAGT+A+AK+LA+++ KGVTTIIGGGDS
Sbjct: 301 GPDSIKTFSEALDTTKTIIWNGPMGVFEFDKFAAGTEAVAKQLAELSGKGVTTIIGGGDS 360

Query: 361 VAAVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALNDA 401
           VAAVEK GLADKMSHISTGGGASLELLEGK LPGVLAL++A
Sbjct: 361 VAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDEA 401



>AT1G56190.1 | chr1:21028403-21030454 FORWARD LENGTH=479
          Length = 478

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/399 (81%), Positives = 370/399 (92%)

Query: 3   SKRSVGTLTESDLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAKVILA 62
           +K+SVG L   DLKGKKVF+RADLNVPLDD+Q ITDDTRIRA++PTIKFL+  GAKVIL+
Sbjct: 75  AKKSVGDLNSVDLKGKKVFVRADLNVPLDDNQNITDDTRIRAAIPTIKFLIENGAKVILS 134

Query: 63  SHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLENVR 122
           +HLGRPKGVTPK+SL PLVPRLSELLG++VV A+DCIG EV+ L A+LP+GGVLLLENVR
Sbjct: 135 THLGRPKGVTPKFSLAPLVPRLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVR 194

Query: 123 FYKEEEKNDPEFANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLMQKELDY 182
           FYKEEEKN+P+FA KLAS+ADLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFL+QKELDY
Sbjct: 195 FYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 254

Query: 183 LVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDILILGGGMIYTFYKAQGYAVGKSL 242
           LVGAV+NPK+PFAAIVGGSKVS+KIGVIESLL K DIL+LGGGMI+TFYKAQG +VG SL
Sbjct: 255 LVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSL 314

Query: 243 VEEDKLELATSLIEKAKSKGVSLLLPTDIVVADKFAADAESKTVPASAIPDGWMGLDIGP 302
           VEEDKLELAT+L+ KAK++GVSLLLPTD+V+ADKFA DA SK VPASAIPDGWMGLDIGP
Sbjct: 315 VEEDKLELATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGP 374

Query: 303 DSIKTFSETLDTTKTVIWNGPMGVFEFEKFAAGTDAIAKKLADITAKGVTTIIGGGDSVA 362
           DS+KTF+E LDTT+TVIWNGPMGVFEFEKFA GT+A+A KLA+++ KGVTTIIGGGDSVA
Sbjct: 375 DSVKTFNEALDTTQTVIWNGPMGVFEFEKFAKGTEAVANKLAELSKKGVTTIIGGGDSVA 434

Query: 363 AVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALNDA 401
           AVEK G+A  MSHISTGGGASLELLEGK LPGV+AL++A
Sbjct: 435 AVEKVGVAGVMSHISTGGGASLELLEGKVLPGVVALDEA 473



>AT3G12780.1 | chr3:4061127-4063140 REVERSE LENGTH=482
          Length = 481

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/399 (81%), Positives = 368/399 (92%)

Query: 3   SKRSVGTLTESDLKGKKVFLRADLNVPLDDSQKITDDTRIRASVPTIKFLMGKGAKVILA 62
           +K+SVG LT +DLKGKKVF+RADLNVPLDD+Q ITDDTRIRA++PTIK+L+  GAKVIL+
Sbjct: 78  AKKSVGDLTSADLKGKKVFVRADLNVPLDDNQTITDDTRIRAAIPTIKYLIENGAKVILS 137

Query: 63  SHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEEVQKLAATLPDGGVLLLENVR 122
           +HLGRPKGVTPK+SL PLVPRLSELLG++V  A+DCIG EV+ L A+LP+GGVLLLENVR
Sbjct: 138 THLGRPKGVTPKFSLAPLVPRLSELLGIEVTKADDCIGPEVESLVASLPEGGVLLLENVR 197

Query: 123 FYKEEEKNDPEFANKLASVADLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLMQKELDY 182
           FYKEEEKNDPEFA KLAS+ADLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFL+QKELDY
Sbjct: 198 FYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDY 257

Query: 183 LVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVDILILGGGMIYTFYKAQGYAVGKSL 242
           LVGAV+NPK+PFAAIVGGSKVS+KIGVIESLL K DIL+LGGGMI+TFYKAQG +VG SL
Sbjct: 258 LVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSL 317

Query: 243 VEEDKLELATSLIEKAKSKGVSLLLPTDIVVADKFAADAESKTVPASAIPDGWMGLDIGP 302
           VEEDKLELAT L+ KAK+KGVSLLLPTD+VVADKFA DA SK VPAS I DGWMGLDIGP
Sbjct: 318 VEEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGP 377

Query: 303 DSIKTFSETLDTTKTVIWNGPMGVFEFEKFAAGTDAIAKKLADITAKGVTTIIGGGDSVA 362
           DSIKTF+E LDTT+TVIWNGPMGVFE EKFAAGT+AIA KLA+++ KGVTTIIGGGDSVA
Sbjct: 378 DSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAGTEAIANKLAELSEKGVTTIIGGGDSVA 437

Query: 363 AVEKAGLADKMSHISTGGGASLELLEGKTLPGVLALNDA 401
           AVEK G+A  MSHISTGGGASLELLEGK LPGV+AL++A
Sbjct: 438 AVEKVGVAGVMSHISTGGGASLELLEGKVLPGVIALDEA 476



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.134    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,238,342
Number of extensions: 345026
Number of successful extensions: 703
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 703
Number of HSP's successfully gapped: 3
Length of query: 401
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,337,553
Effective search space: 2501265900
Effective search space used: 2501265900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 113 (48.1 bits)