BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0667100 Os06g0667100|AK105079
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200 201 4e-52
AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232 193 9e-50
AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218 191 4e-49
AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235 184 4e-47
AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251 184 5e-47
AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203 139 1e-33
AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188 119 1e-27
AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213 110 6e-25
AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187 110 8e-25
AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196 100 9e-22
AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294 61 6e-10
AT5G43250.1 | chr5:17356174-17356566 REVERSE LENGTH=131 54 1e-07
AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265 50 9e-07
>AT1G56170.1 | chr1:21025118-21025717 FORWARD LENGTH=200
Length = 199
Score = 201 bits (510), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 91/113 (80%), Positives = 107/113 (94%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FWA ++ +IE TTDFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACE+FILELTLR
Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR 117
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGLPRAGLP 195
+W+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ + +P
Sbjct: 118 AWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIP 170
>AT1G08970.4 | chr1:2883144-2883839 FORWARD LENGTH=232
Length = 231
Score = 193 bits (490), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 105/114 (92%), Gaps = 1/114 (0%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW + +IE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACE+FILELTLR
Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 121
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVG-LPRAGLP 195
SW HTEENKRRTLQKNDIAAA+TRTD++DFLVDIVPR+DL++E +G +PR +P
Sbjct: 122 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVP 175
>AT1G54830.2 | chr1:20451672-20452325 FORWARD LENGTH=218
Length = 217
Score = 191 bits (484), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 104/129 (80%), Gaps = 11/129 (8%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW + +IE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA+ACE+FILELTLR
Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLR 111
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEE-----------GVGLPR 191
SW HTEENKRRTLQKNDIAAA+TRTD++DFLVDIVPR+DL++E G P
Sbjct: 112 SWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAAGYPY 171
Query: 192 AGLPPLGVP 200
LPP P
Sbjct: 172 GYLPPGTAP 180
>AT3G48590.1 | chr3:18008893-18009938 REVERSE LENGTH=235
Length = 234
Score = 184 bits (467), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 104/131 (79%), Gaps = 12/131 (9%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW + +IEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 106
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEEGVGL-------PRAG-- 193
SW+H EENKRRTLQKNDIAAAITRTD++DFLVDIVPRD++K+E L P A
Sbjct: 107 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGV 166
Query: 194 ---LPPLGVPA 201
PP+G PA
Sbjct: 167 PYYYPPMGQPA 177
>AT5G63470.1 | chr5:25416037-25417084 REVERSE LENGTH=251
Length = 250
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/134 (67%), Positives = 105/134 (78%), Gaps = 15/134 (11%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW + +IEQ DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R
Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIR 119
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEE----------GVGLPRA 192
SW+H EENKRRTLQKNDIAAAITRTD++DFLVDIVPR+++KEE G+ P A
Sbjct: 120 SWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAA 179
Query: 193 G-----LPPLGVPA 201
PP+G PA
Sbjct: 180 SGVPYYYPPMGQPA 193
>AT5G50480.1 | chr5:20557856-20558464 REVERSE LENGTH=203
Length = 202
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 92/133 (69%), Gaps = 18/133 (13%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
+W E++ E +DFKN LPLARIKKIMKAD DV M+SAEAP+IFAKACE+FI++LT+R
Sbjct: 39 YWIEQM---ETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMR 95
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDL------------KEEGVGLP 190
SW+ EENKR TLQK+DI+ A+ + YDFL+D+VP+D+ +G G+P
Sbjct: 96 SWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDESIATADPGFVAMPHPDGGGVP 155
Query: 191 RAGLPP---LGVP 200
+ PP +G P
Sbjct: 156 QYYYPPGVVMGTP 168
>AT5G27910.1 | chr5:9940736-9941299 REVERSE LENGTH=188
Length = 187
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 75/93 (80%), Gaps = 3/93 (3%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW++ + E DFKNH LP+ RIKKIMK D DV MI++EAP++ +KACE+FI++LT+R
Sbjct: 21 FWSKEM---EGNLDFKNHDLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMR 77
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVD 175
SW+H +E+KR TLQK+++ AA+ +T ++DFL+D
Sbjct: 78 SWLHAQESKRVTLQKSNVDAAVAQTVIFDFLLD 110
>AT5G50470.1 | chr5:20555120-20555758 REVERSE LENGTH=213
Length = 212
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 75/104 (72%), Gaps = 9/104 (8%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
+W + + TD K+H+ PL RIKKIMK++ +V M++AEAPV+ +KACE+ IL+LT+R
Sbjct: 48 YW---IAQMGNATDVKHHAFPLTRIKKIMKSNPEVNMVTAEAPVLISKACEMLILDLTMR 104
Query: 143 SWMHTEENKRRTLQ------KNDIAAAITRTDMYDFLVDIVPRD 180
SW+HT E R+TL+ ++DI+AA TR+ + FL D+VPRD
Sbjct: 105 SWLHTVEGGRQTLKRSDTLTRSDISAATTRSFKFTFLGDVVPRD 148
>AT5G50490.1 | chr5:20560610-20561170 REVERSE LENGTH=187
Length = 186
Score = 110 bits (275), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
Query: 83 FWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLR 142
FW++ + E + KNH P++RIK+IMK D DV MI+AEAP + +KACE+F+++LT+R
Sbjct: 21 FWSKGM---EGDLNVKNHEFPISRIKRIMKFDPDVSMIAAEAPNLLSKACEMFVMDLTMR 77
Query: 143 SWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDD 181
SW+H +E+ R T++K+D+ A +++T ++DFL D VP+D+
Sbjct: 78 SWLHAQESNRLTIRKSDVDAVVSQTVIFDFLRDDVPKDE 116
>AT5G38140.1 | chr5:15220377-15222025 REVERSE LENGTH=196
Length = 195
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 83 FWAERLVDIEQTTDFKNHS-LPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTL 141
FW + EQ +F + LPL+R++KI+K+D +V+ IS + P +F+KACE FILE+TL
Sbjct: 51 FWNNQR---EQLGNFAGQTHLPLSRVRKILKSDPEVKKISCDVPALFSKACEYFILEVTL 107
Query: 142 RSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPR--DDLKEEGVGLP-RAGLPPLG 198
R+WMHT+ R T+++ DI A+ + YDFL+D VP + +GV P LP +
Sbjct: 108 RAWMHTQSCTRETIRRCDIFQAVKNSGTYDFLIDRVPFGPHCVTHQGVQPPAEMILPDMN 167
Query: 199 VPAD 202
VP D
Sbjct: 168 VPID 171
>AT3G12480.1 | chr3:3958065-3960278 FORWARD LENGTH=294
Length = 293
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%)
Query: 102 LPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIA 161
P ARIKKIM+ADEDV I+ PV+ +K+ E+F+ +L R++ T E +T+ +
Sbjct: 9 FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68
Query: 162 AAITRTDMYDFLVDIVPR 179
+ R +++DFL ++V +
Sbjct: 69 HCVERYNVFDFLREVVSK 86
>AT5G43250.1 | chr5:17356174-17356566 REVERSE LENGTH=131
Length = 130
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 102 LPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIA 161
P+ R+KKIMK D+D+ I++EA + + E+F+ L +S + T E KR+T+ + +
Sbjct: 12 FPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTAEKKRKTVNLDHLR 71
Query: 162 AAITRTD-MYDFLVDIVP 178
A+ R DFL+D +P
Sbjct: 72 IAVKRHQPTSDFLLDSLP 89
>AT5G19490.1 | chr5:6576769-6578273 REVERSE LENGTH=265
Length = 264
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 102 LPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIA 161
P RIKKIM+ DE+V I+ P++ +KA E+F+ +L ++ T +T+ +
Sbjct: 9 FPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNAFHLK 68
Query: 162 AAITRTDMYDFLVDIVPR 179
+ T+++DFL D V +
Sbjct: 69 QCVQATNVFDFLRDTVAK 86
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,974,420
Number of extensions: 128181
Number of successful extensions: 249
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 13
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)