BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0645800 Os06g0645800|AK064421
         (880 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G32750.1  | chr1:11846385-11856261 REVERSE LENGTH=1920         623   e-178
AT3G19040.1  | chr3:6567157-6575282 REVERSE LENGTH=1787           530   e-150

>AT1G32750.1 | chr1:11846385-11856261 REVERSE LENGTH=1920
          Length = 1919

 Score =  623 bits (1606), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 360/725 (49%), Positives = 471/725 (64%), Gaps = 35/725 (4%)

Query: 1    LANAGMAARLCTYYQKTSPSDQTATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSC 60
            L+NAGM A LCTYYQK+SP DQ    LR+ SD LG ++ ++P DKSPFLG I +G  QS 
Sbjct: 783  LSNAGMGANLCTYYQKSSPEDQRGNLLRNQSDTLGNVMILEPGDKSPFLGEIHAGCSQSS 842

Query: 61   LETNMYRAPVFPHKVATTDYLLVRSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKNMQN 120
            +ETNMY+AP+FP ++ +TDYLLVRSPKG LSLRRIDK+  VGQQEP MEV SPG+KN+Q 
Sbjct: 843  VETNMYKAPIFPQRLQSTDYLLVRSPKGKLSLRRIDKIVVVGQQEPRMEVMSPGSKNLQT 902

Query: 121  YILNRILVYVYREFRAR---EKPGIIPQIRADELP-IQPPITEAIVRKRLKHCADLRKGP 176
            Y++NR+LVYVYREF  R   E P     I ADEL  +   +T+AI++K +K  A  ++  
Sbjct: 903  YLVNRMLVYVYREFFKRGGGEHP-----IAADELSFLFSNLTDAIIKKNMKIIACWKRDK 957

Query: 177  KGHLFYIQRPDFRIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAM 236
             G  ++ ++     P E EL++L+ PE+VC YESM AG YRLKHLGI + T P  +++A+
Sbjct: 958  NGQSYWTKKDSLLEPPESELKKLVAPEHVCSYESMLAGLYRLKHLGITRFTLPASISNAL 1017

Query: 237  NQLPDXXXXXXXXXXXXXXXQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGF 296
             QLPD               QIT WNL+SNFVACTNQD+ NIERLEITGVGDPSGRGLGF
Sbjct: 1018 AQLPDEAIALAAASHIERELQITPWNLSSNFVACTNQDRANIERLEITGVGDPSGRGLGF 1077

Query: 297  SYVRVTPKAPVSNSTHKKKSAAAKGT-TVTGTDADLRRLSMDAARELLLKFGVPEEQIDK 355
            SYVR  PKAP +    KKK+AA +G  TVTGTDADLRRLSM+AARE+L+KF VP+E I K
Sbjct: 1078 SYVRAAPKAPAAAGHMKKKAAAGRGAPTVTGTDADLRRLSMEAAREVLIKFNVPDEIIAK 1137

Query: 356  LTRWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQ 415
             TRWHRIAM+RKLSSEQAASGV +D   + K+ARGQRMSFLQ+QQQ +EKCQEIWDRQ+ 
Sbjct: 1138 QTRWHRIAMIRKLSSEQAASGVKVDPTTIGKYARGQRMSFLQMQQQAREKCQEIWDRQLL 1197

Query: 416  SLSAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMR 475
            SLSA DG+EN S+ EANSDLDSFAGDLENLLDAEE  + +  N   ++DK+DG++GLKMR
Sbjct: 1198 SLSAFDGDENESENEANSDLDSFAGDLENLLDAEEGGEGEESNIS-KNDKLDGVKGLKMR 1256

Query: 476  RCHTQSQINEEIQDDXXXXXXXXXXXXXSDSDMKRKKQPVETT-----NYSTPMYNQGNK 530
            R  +Q + +EEI+D+              D D K+KK+ ++       +Y  P  N    
Sbjct: 1257 RRPSQVETDEEIEDE-ATEYAELCRLLMQDEDQKKKKKKMKGVGEGMGSYPPPRPNIA-- 1313

Query: 531  MKQG----KAGQMIKSSVYAGALTPKES-IPREAKEVENFAEGSLPSKLRTKTGFDANDD 585
            ++ G    KA  M K  +   A+ P  S +  E+   +N    S+    + K   + ++ 
Sbjct: 1314 LQSGEPVRKANAMDKKPI---AIQPDASFLVNESTIKDNRNVDSIIKTPKGKQVKENSNS 1370

Query: 586  IILVKRKNIPGKDGFKEKRQGARGDTLVCGACGQLGHMRTNKLCPKYGED----PETSEM 641
            +  +K+  I  ++    K + +  +  VCGACGQ GHMRTNK CP+Y E+    PE  +M
Sbjct: 1371 LGQLKKVKILNENLKVFKEKKSARENFVCGACGQHGHMRTNKHCPRYRENTESQPEGIDM 1430

Query: 642  DVNSIR---SHPPDIVSNAQIKTSNKRLVAKVSSEAFET-EGPESIEKAKPVPVKFKCGA 697
            D ++ +   S P  +     IK S     + + +   E  +G +   K   +P+KF+ G 
Sbjct: 1431 DKSAGKPSSSEPSGLPKLKPIKNSKAAPKSAMKTSVDEALKGDKLSSKTGGLPLKFRYGI 1490

Query: 698  PEKSL 702
            P   L
Sbjct: 1491 PAGDL 1495



>AT3G19040.1 | chr3:6567157-6575282 REVERSE LENGTH=1787
          Length = 1786

 Score =  530 bits (1364), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 270/483 (55%), Positives = 345/483 (71%), Gaps = 14/483 (2%)

Query: 1    LANAGMAARLCTYYQKTSPSDQTATSLRSNSDGLGTMLAIDPADKSPFLGNIRSGSHQSC 60
            L+NAGM A LCTYYQK+SP DQ    LR+ SD LG+++ ++  +KSPFLG +  G  QS 
Sbjct: 696  LSNAGMGANLCTYYQKSSPEDQHGNLLRNQSDTLGSVIILEHGNKSPFLGEVHGGCSQSS 755

Query: 61   LETNMYRAPVFPHKVATTDYLLVRSPKGMLSLRRIDKLYAVGQQEPHMEVFSPGTKNMQN 120
            +ETNMY+APVFPH++ +TDYLLVRS KG LSLRRI+K+ AVGQQEP ME+ SP +KN+  
Sbjct: 756  VETNMYKAPVFPHRLQSTDYLLVRSAKGKLSLRRINKIVAVGQQEPRMEIMSPASKNLHA 815

Query: 121  YILNRILVYVYREFRAREKPGIIPQIRADELPIQ-PPITEAIVRKRLKHCADLRKGPKGH 179
            Y++NR++ YVYREF+ R++      I ADEL      I++A VRK ++ C+DL +   G 
Sbjct: 816  YLVNRMMAYVYREFKHRDR------IAADELSFSFSNISDATVRKYMQVCSDLERDANGK 869

Query: 180  LFYIQRPDF-RIPSEEELRRLLTPENVCCYESMQAGQYRLKHLGIEKLTQPVGLASAMNQ 238
              + ++  F +IP    L  L+ PE+VC YESM AG +RLKHLGI + T P  +++A+ Q
Sbjct: 870  ACWSKKRKFDKIPL--GLNTLVAPEDVCSYESMLAGLFRLKHLGITRFTLPASISTALAQ 927

Query: 239  LPDXXXXXXXXXXXXXXXQITSWNLTSNFVACTNQDKENIERLEITGVGDPSGRGLGFSY 298
            LPD               QIT WNL+S+FV C  Q +ENIERLEITGVGDPSGRGLGFSY
Sbjct: 928  LPD--ERIAAASHIARELQITPWNLSSSFVTCATQGRENIERLEITGVGDPSGRGLGFSY 985

Query: 299  VRVTPKAPVSNSTHKKKSAAAKGT-TVTGTDADLRRLSMDAARELLLKFGVPEEQIDKLT 357
            VRV PK+  ++   KKK+AA +G  TVTGTDAD RRLSM+AARE+LLKF VP+E I K T
Sbjct: 986  VRVAPKSSAASEHKKKKAAACRGVPTVTGTDADPRRLSMEAAREVLLKFNVPDEIIAKQT 1045

Query: 358  RWHRIAMVRKLSSEQAASGVTMDEIPVSKFARGQRMSFLQLQQQTKEKCQEIWDRQIQSL 417
            + HR AM+RK+SSEQAASG  +    V  F+R QRMSFLQLQQQ +E C EIWDRQ  SL
Sbjct: 1046 QRHRTAMIRKISSEQAASGGKVGPTTVGMFSRSQRMSFLQLQQQAREMCHEIWDRQRLSL 1105

Query: 418  SAMDGNENGSDTEANSDLDSFAGDLENLLDAEEFDDEDVGNTDIRSDKMDGMRGLKMRRC 477
            SA D + N S+ EANSDLDSF GDLE+LLDAE+  + +  N  + ++K+DG++GLKMRR 
Sbjct: 1106 SACDDDGNESENEANSDLDSFVGDLEDLLDAEDGGEGEESNKSM-NEKLDGVKGLKMRRW 1164

Query: 478  HTQ 480
             +Q
Sbjct: 1165 PSQ 1167



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.131    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,815,023
Number of extensions: 751775
Number of successful extensions: 1650
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1641
Number of HSP's successfully gapped: 2
Length of query: 880
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 773
Effective length of database: 8,173,057
Effective search space: 6317773061
Effective search space used: 6317773061
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)